
Hongming Chen
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2020 – today
- 2020
- [j27]Michael Withnall
, Edvard Lindelöf, Ola Engkvist
, Hongming Chen:
Building attention and edge message passing neural networks for bioactivity and physical-chemical property prediction. J. Cheminformatics 12(1): 1 (2020) - [j26]Noé Sturm, Andreas Mayr, Thanh Le Van, Vladimir I. Chupakhin, Hugo Ceulemans, Jörg K. Wegner
, José Felipe Golib Dzib, Nina Jeliazkova
, Yves Vandriessche, Stanislav Böhm, Vojtech Cima, Jan Martinovic
, Nigel Greene, Tom Vander Aa, Thomas J. Ashby, Sepp Hochreiter, Ola Engkvist
, Günter Klambauer, Hongming Chen:
Industry-scale application and evaluation of deep learning for drug target prediction. J. Cheminformatics 12(1): 26 (2020) - [j25]Josep Arús-Pous, Atanas Patronov, Esben Jannik Bjerrum, Christian Tyrchan, Jean-Louis Reymond, Hongming Chen, Ola Engkvist
:
SMILES-based deep generative scaffold decorator for de-novo drug design. J. Cheminformatics 12(1): 38 (2020)
2010 – 2019
- 2019
- [j24]Qing Song, Yingqi Wu
, Xueshi Xin, Lu Yang, Min Yang, Hongming Chen, Chun Liu, Mengjie Hu, Xuesong Chai, Jianchao Li:
Real-Time Tunnel Crack Analysis System via Deep Learning. IEEE Access 7: 64186-64197 (2019) - [j23]Josep Arús-Pous
, Thomas Blaschke, Silas Ulander, Jean-Louis Reymond
, Hongming Chen, Ola Engkvist
:
Exploring the GDB-13 chemical space using deep generative models. J. Cheminformatics 11(1): 20:1-20:14 (2019) - [j22]Oliver Laufkötter
, Noé Sturm, Jürgen Bajorath, Hongming Chen, Ola Engkvist
:
Combining structural and bioactivity-based fingerprints improves prediction performance and scaffold hopping capability. J. Cheminformatics 11(1): 54:1-54:14 (2019) - [j21]Josep Arús-Pous
, Simon Johansson
, Oleksii Prykhodko, Esben Jannik Bjerrum, Christian Tyrchan, Jean-Louis Reymond
, Hongming Chen, Ola Engkvist
:
Randomized SMILES strings improve the quality of molecular generative models. J. Cheminformatics 11(1): 71:1-71:13 (2019) - [j20]Oleksii Prykhodko, Simon Johansson
, Panagiotis-Christos Kotsias, Josep Arús-Pous
, Esben Jannik Bjerrum, Ola Engkvist
, Hongming Chen:
A de novo molecular generation method using latent vector based generative adversarial network. J. Cheminformatics 11(1): 74 (2019) - [j19]Noé Sturm, Jiangming Sun
, Yves Vandriessche, Andreas Mayr, Günter Klambauer
, Lars Carlsson, Ola Engkvist
, Hongming Chen:
Application of Bioactivity Profile-Based Fingerprints for Building Machine Learning Models. J. Chem. Inf. Model. 59(3): 962-972 (2019) - [c12]Jiangming Sun, Nina Jeliazkova, Vladimir I. Chupakhin, José Felipe Golib Dzib, Lars Carlsson, Jörg K. Wegner, Hugo Ceulemans, Ivan Georgiev, Vedrin Jeliazkov, Nikolay T. Kochev, Thomas J. Ashby, Hongming Chen:
ExCAPE-DB: An Integrated Large Scale Dataset Facilitating Big Data Analysis in Chemogenomics. BNAIC/BENELEARN 2019 - [c11]Josep Arús-Pous
, Simon Johansson
, Oleksii Prykhodko
, Esben Jannik Bjerrum
, Christian Tyrchan
, Jean-Louis Reymond
, Hongming Chen
, Ola Engkvist
:
Improving Deep Generative Models with Randomized SMILES. ICANN (Workshop) 2019: 747-751 - [c10]Michael Withnall
, Edvard Lindelöf, Ola Engkvist
, Hongming Chen:
Attention and Edge Memory Convolution for Bioactivity Prediction. ICANN (Workshop) 2019: 752-757 - [c9]Philip T. G. Jackson, Yinhai Wang, Sinead Knight, Hongming Chen, Thierry Dorval, Martin Brown, Claus Bendtsen
, Boguslaw Obara:
Phenotypic Profiling of High Throughput Imaging Screens with Generic Deep Convolutional Features. MVA 2019: 1-4 - [i3]Philip T. G. Jackson
, Yinhai Wang, Sinead Knight, Hongming Chen, Thierry Dorval, Martin Brown, Claus Bendtsen, Boguslaw Obara:
Phenotypic Profiling of High Throughput Imaging Screens with Generic Deep Convolutional Features. CoRR abs/1903.06516 (2019) - 2017
- [j18]Jiangming Sun, Nina Jeliazkova
, Vladimir I. Chupakhin, José Felipe Golib Dzib, Ola Engkvist
, Lars Carlsson, Jörg K. Wegner
, Hugo Ceulemans, Ivan Georgiev, Vedrin Jeliazkov
, Nikolay T. Kochev
, Thomas J. Ashby, Hongming Chen:
ExCAPE-DB: an integrated large scale dataset facilitating Big Data analysis in chemogenomics. J. Cheminformatics 9(1): 17:1-17:9 (2017) - [j17]Jiangming Sun, Nina Jeliazkova, Vladimir I. Chupakhin, José Felipe Golib Dzib, Ola Engkvist
, Lars Carlsson, Jörg K. Wegner, Hugo Ceulemans, Ivan Georgiev, Vedrin Jeliazkov, Nikolay T. Kochev, Thomas J. Ashby, Hongming Chen:
Erratum to: ExCAPE-DB: an integrated large scale dataset facilitating Big Data analysis in chemogenomics. J. Cheminformatics 9(1): 41:1 (2017) - [j16]Marcus Olivecrona
, Thomas Blaschke, Ola Engkvist
, Hongming Chen:
Molecular de-novo design through deep reinforcement learning. J. Cheminformatics 9(1): 48:1-48:14 (2017) - [i2]Marcus Olivecrona, Thomas Blaschke, Ola Engkvist
, Hongming Chen:
Molecular De Novo Design through Deep Reinforcement Learning. CoRR abs/1704.07555 (2017) - [i1]Thomas Blaschke, Marcus Olivecrona, Ola Engkvist
, Jürgen Bajorath, Hongming Chen:
Application of generative autoencoder in de novo molecular design. CoRR abs/1711.07839 (2017) - 2016
- [j15]Long Zhao
, Chenxi Deng, Guan Wang, Hongming Chen, Yuhua Cheng:
A 1.1V 12μW 86dB DR Sigma-Delta Modulator for Health Monitoring System. J. Circuits Syst. Comput. 25(6): 1650059:1-1650059:17 (2016) - [c8]Hongming Chen, Yan Chen:
The Performance Appraisal of Port Logistics Informationization. IDCS 2016: 413-420 - 2015
- [c7]Long Zhao, Chenxi Deng, Hongming Chen, Guan Wang, Yuhua Cheng:
A 1-V 23-μW 88-dB DR Sigma-Delta ADC for high-accuracy and low-power applications. ASICON 2015: 1-4 - 2014
- [j14]Hongming Chen, Yuhua Cheng:
A leakage current suppression technique for cascade SRAM array in 55 nm CMOS technology. Sci. China Inf. Sci. 57(8): 1-8 (2014) - [j13]Hongming Chen, Song Ma, Liu Wang, Hao Zhang, Kenyi Pan, Yuhua Cheng:
A low-power, area-efficient all-digital delay-locked loop for DDR3 SDRAM controller. Sci. China Inf. Sci. 57(12): 1-8 (2014) - [j12]Mats Eriksson, Hongming Chen, Lars Carlsson, J. Willem M. Nissink
, John G. Cumming, Ingemar Nilsson:
Beyond the Scope of Free-Wilson Analysis. 2 Can Distance Encoded R-Group Fingerprints Provide Interpretable Nonlinear Models? J. Chem. Inf. Model. 54(4): 1117-1128 (2014) - 2013
- [j11]Hongming Chen, Lars Carlsson, Mats Eriksson, Péter L. Várkonyi, Ulf Norinder
, Ingemar Nilsson:
Beyond the Scope of Free-Wilson Analysis: Building Interpretable QSAR Models with Machine Learning Algorithms. J. Chem. Inf. Model. 53(6): 1324-1336 (2013) - [c6]Yiwu Yao, Kailiang Zhang, Hongming Chen, Yuhua Cheng:
The decimator with multiplier-free realizations for high precision ADC applications. ASICON 2013: 1-4 - 2012
- [j10]Hongming Chen, Yanan Shi:
Empirical Study on the Correlation between the Internal Control and Enterprise Value - Based on the Information System. J. Comput. 7(7): 1688-1695 (2012) - [j9]Hongming Chen, Xiaocan Xiao:
The Application of SPSS Factor Analysis in the Evaluation of Corporate Social Responsibility. J. Softw. 7(6): 1258-1264 (2012) - [c5]Hongming Chen, Yuhua Cheng:
VLSI implementation of color interpolation in color difference spaces. ISCAS 2012: 1680-1683 - [c4]Yiwu Yao, Hongming Chen, Yuhua Cheng:
A low power IC for efficient de-interlacing based on refined motion adaptive method. ISIE 2012: 1094-1099 - 2011
- [j8]Hongming Chen, Wenchuan Sun:
Study on Rational Application of eXtensible Business Reporting Language. J. Softw. 6(2): 257-264 (2011) - [c3]Hongming Chen, Xiaoyuan Chen, Tie Liu, Yuhua Cheng:
ASIC implementation of an OFDM baseband transceiver for HINOC. ASICON 2011: 167-170 - [c2]Hongming Chen, Xiaoyuan Chen, Yuhua Cheng:
A dual 12bit 80MSPS 3.3V Current-Steering DAC for HINOC. ASICON 2011: 488-491 - 2010
- [j7]Hongming Chen, Yidong Yang, Ola Engkvist
:
Molecular Topology Analysis of the Differences between Drugs, Clinical Candidate Compounds, and Bioactive Molecules. J. Chem. Inf. Model. 50(12): 2141-2150 (2010)
2000 – 2009
- 2009
- [j6]Hongming Chen, Ulf Borjesson, Ola Engkvist
, Thierry Kogej, Mats Svensson, Niklas Blomberg
, Dirk Weigelt, Jeremy N. Burrows, Tim Lange:
ProSAR: A New Methodology for Combinatorial Library Design. J. Chem. Inf. Model. 49(3): 603-614 (2009) - 2008
- [j5]Timothy Lovell, Hongming Chen, Paul D. Lyne, Fabrizio Giordanetto, Jin Li:
On Evaluating Molecular-Docking Methods for Pose Prediction and Enrichment Factors. [J. Chem. Inf. Model. 46, 401-415 (2006)]. J. Chem. Inf. Model. 48(1): 246 (2008) - 2006
- [j4]Hongming Chen, Paul D. Lyne, Fabrizio Giordanetto, Timothy Lovell, Jin Li:
On Evaluating Molecular-Docking Methods for Pose Prediction and Enrichment Factors. J. Chem. Inf. Model. 46(1): 401-415 (2006) - 2005
- [c1]Hongming Chen, Zhijun Liao, Xiaoqing Zeng:
The planning research on financial informationization of electrical power business. ICEC 2005: 41-44 - 2004
- [j3]Colin R. Gardner, Orn Almarsson, Hongming Chen, Sherry Morissette, Matt Peterson, Zhong Zhang, Szu Wang, Anthony Lemmo, Javier Gonzalez-Zugasti, Julie Monagle, Joseph Marchionna, Steve Ellis, Chris McNulty, Alasdair Johnson, Doug Levinson, Michael Cima:
Application of high throughput technologies to drug substance and drug product development. Comput. Chem. Eng. 28(6-7): 943-953 (2004) - 2000
- [j2]Salvatore Guccione
, Arthur M. Doweyko, Hongming Chen, Gloria Uccello Barretta, Federica Balzano
:
3D-QSAR using 'Multiconformer' alignment: The use of HASL in the analysis of 5-HT1A thienopyrimidinone ligands. J. Comput. Aided Mol. Des. 14(7): 647-657 (2000)
1990 – 1999
- 1998
- [j1]Hongming Chen, Jiaju Zhou, Guirong Xie:
PARM: A Genetic Evolved Algorithm To Predict Bioactivity. J. Chem. Inf. Comput. Sci. 38(2): 243-250 (1998)
Coauthor Index

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