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ORCIDLei Wei 0009
Person information
- affiliation: Tsinghua University, Beijing National Research Center for Information Science and Technology (BNRist), Beijing, China
- affiliation: Tsinghua University, Department of Automation, MOE Key Lab of Bioinformatics, Beijing, China
Other persons with the same name
- Lei Wei — disambiguation page
- Lei Wei 0001 — Nanyang Technological University, School of Physical & Mathematical Sciences, Singapore
- Lei Wei 0002
![[0000-0001-8267-0283]](https://dblp.org/img/orcid-mark.12x12.png "0000-0001-8267-0283")
— Deakin University, Institute for Intelligent Systems Research and Innovation, Geelong, VIC, Australia (and 1 more) - Lei Wei 0003 — University of Central Florida, Orlando, FL, USA (and 2 more)
- Lei Wei 0004 — Apple, Inc., Cupertino, CA, USA (and 1 more)
- Lei Wei 0005 — Renmin University of China, Information School, Beijing, China
- Lei Wei 0006 — Beijing Jiaotong University, Institute of Information Science, Beijing, China
- Lei Wei 0007 — Delft University of Technology, Faculty of Electrical Engineering, Mathematics and Computer Science, The Netherlands
- Lei Wei 0008 — Nanyang Technological University, School of Computer Engineering, Singapore
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2020 – today
- 2025
[j19]Xiaofei Zhao, Lei Wei, Xuegong Zhang:
Computational methods and data resources for predicting tumor neoantigens. Briefings Bioinform. 26(4) (2025)- [j18]Haiyang Bian, Yinxin Chen, Lei Wei, Xuegong Zhang:
uHAF: a unified hierarchical annotation framework for cell type standardization and harmonization. Bioinform. 41(4) (2025) - [j17]Wei Zhang, Xianglin Zhang, Qiao Liu, Lei Wei, Xu Qiao, Rui Gao, Zhiping Liu, Xiaowo Wang:
Deconer: An Evaluation Toolkit for Reference-based Deconvolution Methods Using Gene Expression Data. Genom. Proteom. Bioinform. 23(1) (2025) - [j16]Zhen-Bin Qiu, Jiaqi Li, Shihua Dou, Qiuchen Meng, Meng-Min Wang, Hong-Ji Li, Chao Zhang, Hongsheng Xie, Ben-Yuan Jiang, Jun-Tao Lin, Jia-Tao Zhang, Fang-Ping Xu, Jin-Hai Yan, Lei Wei, Yi-Long Wu, Haibo Wang, Lin Yang, Xuegong Zhang, Wen-Zhao Zhong:
Quantifying Early-Stage Lung Adenocarcinoma Progression with a Radiomic Trajectory. npj Digit. Medicine 8(1) (2025) - [i4]Erpai Luo, Jinmeng Jia, Yifan Xiong, Xiangyu Li, Xiaobo Guo, Baoqi Yu, Lei Wei, Xuegong Zhang:
Benchmarking AI scientists in omics data-driven biological research. CoRR abs/2505.08341 (2025) - [i3]Tianhong Zhou, Yin Xu, Yingtao Zhu, Chuxi Xiao, Haiyang Bian, Lei Wei, Xuegong Zhang:
DrVD-Bench: Do Vision-Language Models Reason Like Human Doctors in Medical Image Diagnosis? CoRR abs/2505.24173 (2025) - 2024
- [j15]Qiuchen Meng, Lei Wei, Kun Ma, Ming Shi, Xinyi Lin, Joshua W. K. Ho, Yinqing Li, Xuegong Zhang:
scDecouple: decoupling cellular response from infected proportion bias in scCRISPR-seq. Briefings Bioinform. 25(2) (2024) - [j14]Chuxi Xiao, Yixin Chen, Qiuchen Meng, Lei Wei, Xuegong Zhang:
Benchmarking multi-omics integration algorithms across single-cell RNA and ATAC data. Briefings Bioinform. 25(2) (2024) - [j13]Erpai Luo, Minsheng Hao, Lei Wei, Xuegong Zhang:
scDiffusion: conditional generation of high-quality single-cell data using diffusion model. Bioinform. 40(9) (2024) - [j12]Tianxing Ma, Zetong Zhao, Haochen Li, Lei Wei, Xuegong Zhang:
NeoHunter: Flexible software for systematically detecting neoantigens from sequencing data. Quant. Biol. 12(1): 70-84 (2024) - [j11]Minsheng Hao, Lei Wei, Fan Yang, Jianhua Yao, Christina V. Theodoris, Bo Wang, Xin Li, Ge Yang, Xuegong Zhang:
Current opinions on large cellular models. Quant. Biol. 12(4): 433-443 (2024) - [c2]Ziting Zhang, Wenxu Wu, Lei Wei, Xiaowo Wang:
Discovering and Overcoming the Bias in Neoantigen Identification by Unified Machine Learning Models. RECOMB 2024: 348-351 - [c1]Haiyang Bian, Yixin Chen, Xiaomin Dong, Chen Li, Minsheng Hao, Sijie Chen, Jinyi Hu, Maosong Sun, Lei Wei, Xuegong Zhang:
scMulan: A Multitask Generative Pre-Trained Language Model for Single-Cell Analysis. RECOMB 2024: 479-482 - [i2]Erpai Luo, Minsheng Hao, Lei Wei, Xuegong Zhang:
scDiffusion: conditional generation of high-quality single-cell data using diffusion model. CoRR abs/2401.03968 (2024) - [i1]Mo Chen, Minsheng Hao, Xuegong Zhang, Lei Wei:
QueST: Querying Functional and Structural Niches on Spatial Transcriptomics Data via Contrastive Subgraph Embedding. CoRR abs/2410.10652 (2024) - 2023
- [j10]Haochen Li, Tianxing Ma, Minsheng Hao, Wenbo Guo, Jin Gu, Xuegong Zhang, Lei Wei:
Decoding functional cell-cell communication events by multi-view graph learning on spatial transcriptomics. Briefings Bioinform. 24(6) (2023) - [j9]Jiaqi Li, Zhuofeng Li, Lei Wei, Xuegong Zhang:
Machine Learning in Lung Cancer Radiomics. Mach. Intell. Res. 20(6): 753-782 (2023) - [j8]Xuegong Zhang, Lei Wei, Rui Jiang, Xiaowo Wang, Jin Gu, Zhen Xie, Hairong Lv:
Building digital life systems for future biology and medicine. Quant. Biol. 11(3): 207-213 (2023) - 2022
- [j7]Wei Zhang, Hanwen Xu, Rong Qiao, Bixi Zhong, Xianglin Zhang, Jin Gu, Xuegong Zhang, Lei Wei, Xiaowo Wang:
ARIC: accurate and robust inference of cell type proportions from bulk gene expression or DNA methylation data. Briefings Bioinform. 23(1) (2022) - [j6]Xianglin Zhang, Xiaodong Jia, Bixi Zhong, Lei Wei, Jiaqi Li, Wei Zhang, Huan Fang, Yanda Li, Yinying Lu, Xiaowo Wang:
Evaluating methylation of human ribosomal DNA at each CpG site reveals its utility for cancer detection using cell-free DNA. Briefings Bioinform. 23(4) (2022) - 2021
- [j5]Jiaqi Li, Lei Wei, Xianglin Zhang, Wei Zhang, Haochen Wang, Bixi Zhong, Zhen Xie, Hairong Lv, Xiaowo Wang:
DISMIR: Deep learning-based noninvasive cancer detection by integrating DNA sequence and methylation information of individual cell-free DNA reads. Briefings Bioinform. 22(6) (2021) - [j4]Tao Hu, Shixiong Xu, Lei Wei, Xuegong Zhang, Xiaowo Wang:
CellTracker: an automated toolbox for single-cell segmentation and tracking of time-lapse microscopy images. Bioinform. 37(2): 285-287 (2021) - [j3]Wei Zhang, Lei Wei, Jiaqi Huang, Bixi Zhong, Jiaqi Li, Hanwen Xu, Shuying He, Yu Liu, Juhong Liu, Hairong Lv, Xiaowo Wang:
cfDNApipe: a comprehensive quality control and analysis pipeline for cell-free DNA high-throughput sequencing data. Bioinform. 37(22): 4251-4252 (2021) - [j2]Tao Hu, Lei Wei, Shuailin Li, Tianrun Cheng, Xuegong Zhang, Xiaowo Wang:
Single-cell Transcriptomes Reveal Characteristics of MicroRNAs in Gene Expression Noise Reduction. Genom. Proteom. Bioinform. 19(3): 394-407 (2021)
2010 – 2019
- 2019
- [j1]Lei Wei, Ye Yuan, Tao Hu, Shuailin Li, Tianrun Cheng, Jinzhi Lei, Zhen Xie, Michael Q. Zhang, Xiaowo Wang:
Regulation by competition: a hidden layer of gene regulatory network. Quant. Biol. 7(2): 110-121 (2019)
Coauthor Index
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