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ORCIDUdo Hahn
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- affiliation: University of Jena, Germany
- affiliation (former): University of Freiburg, Germany
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2020 – today
- 2023
[j40]Erik Faessler
, Udo Hahn, Sascha Schäuble:
GePI: large-scale text mining, customized retrieval and flexible filtering of gene/protein interactions. Nucleic Acids Res. 51(W1): 237-242 (2023)- [c241]Christina Lohr, Udo Hahn:
DOPA METER - A Tool Suite for Metrical Document Profiling and Aggregation. EMNLP (Demos) 2023: 218-228 - [c240]Udo Hahn, Luise Modersohn, Jakob Faller, Christina Lohr:
Final Report on the German Clinical Reference Corpus 3000PA. MedInfo 2023: 599-603 - [c239]Luise Modersohn, Udo Hahn:
Influence of Context in Transformer-Based Medication Relation Extraction. MedInfo 2023: 669-673 - [i24]Sven Buechel, Udo Hahn:
Emotion Embeddings - Learning Stable and Homogeneous Abstractions from Heterogeneous Affective Datasets. CoRR abs/2308.07871 (2023) - 2022
- [c238]Luise Modersohn, Stefan Schulz, Christina Lohr, Udo Hahn:
GRASCCO - The First Publicly Shareable, Multiply-Alienated German Clinical Text Corpus. GMDS 2022: 66-72 - [c237]Elisabeth Eder, Michael Wiegand, Ulrike Krieg-Holz, Udo Hahn:
"Beste Grüße, Maria Meyer" - Pseudonymization of Privacy-Sensitive Information in Emails. LREC 2022: 741-752 - [c236]Florian Borchert, Christina Lohr, Luise Modersohn, Jonas Witt, Thomas Langer, Markus Follmann, Matthias Gietzelt, Bert Arnrich, Udo Hahn, Matthieu-P. Schapranow:
GGPONC 2.0 - The German Clinical Guideline Corpus for Oncology: Curation Workflow, Annotation Policy, Baseline NER Taggers. LREC 2022: 3650-3660 - [i23]Sven Buechel, Udo Hahn:
EmoBank: Studying the Impact of Annotation Perspective and Representation Format on Dimensional Emotion Analysis. CoRR abs/2205.01996 (2022) - 2021
- [c235]Elisabeth Eder, Ulrike Krieg-Holz, Udo Hahn:
Acquiring a Formality-Informed Lexical Resource for Style Analysis. EACL 2021: 2028-2041 - [c234]Sven Buechel, Luise Modersohn, Udo Hahn:
Towards Label-Agnostic Emotion Embeddings. EMNLP (1) 2021: 9231-9249 - [c233]Christina Lohr, Elisabeth Eder, Udo Hahn:
Pseudonymization of PHI Items in German Clinical Reports. MIE 2021: 273-277 - 2020
- [c232]Sven Buechel, Susanna Rücker, Udo Hahn:
Learning and Evaluating Emotion Lexicons for 91 Languages. ACL 2020: 1202-1217 - [c231]Florian Borchert, Christina Lohr, Luise Modersohn, Thomas Langer, Markus Follmann, Jan-Philipp Sachs, Udo Hahn, Matthieu-P. Schapranow:
GGPONC: A Corpus of German Medical Text with Rich Metadata Based on Clinical Practice Guidelines. LOUHI@EMNLP 2020: 38-48 - [c230]Tinghui Duan, Sven Buechel, Udo Hahn:
"Romantik" im aktuellen parteipolitischen Diskurs auf Twitter. DHd 2020 - [c229]Tinghui Duan, Udo Hahn:
Diffusion and Change of the Romantic Concept in Historical Newspapers. DH 2020 - [c228]Bernd Kampe, Tinghui Duan, Udo Hahn:
Allgemeine Musikalische Zeitung as a Searchable Online Corpus. LREC 2020: 969-976 - [c227]Elisabeth Eder, Ulrike Krieg-Holz, Udo Hahn:
CodE Alltag 2.0 - A Pseudonymized German-Language Email Corpus. LREC 2020: 4466-4477 - [c226]Erik Faessler, Luise Modersohn, Christina Lohr, Udo Hahn:
ProGene - A Large-scale, High-Quality Protein-Gene Annotated Benchmark Corpus. LREC 2020: 4585-4596 - [c225]Christina Lohr, Luise Modersohn, Johannes Hellrich, Tobias Kolditz, Udo Hahn:
An Evolutionary Approach to the Annotation of Discharge Summaries. MIE 2020: 28-32 - [c224]Erik Faessler, Michel Oleynik, Udo Hahn:
What Makes a Top-Performing Precision Medicine Search Engine?: Tracing Main System Features in a Systematic Way. SIGIR 2020: 459-468 - [i22]Sven Buechel, Susanna Rücker, Udo Hahn:
Learning and Evaluating Emotion Lexicons for 91 Languages. CoRR abs/2005.05672 (2020) - [i21]Erik Faessler, Michel Oleynik, Udo Hahn:
What Makes a Top-Performing Precision Medicine Search Engine? Tracing Main System Features in a Systematic Way. CoRR abs/2006.02785 (2020) - [i20]Florian Borchert, Christina Lohr, Luise Modersohn, Thomas Langer, Markus Follmann, Jan-Philipp Sachs, Udo Hahn, Matthieu-P. Schapranow:
GGPONC: A Corpus of German Medical Text with Rich Metadata Based on Clinical Practice Guidelines. CoRR abs/2007.06400 (2020) - [i19]Sven Buechel, Luise Modersohn, Udo Hahn:
Towards a Unified Framework for Emotion Analysis. CoRR abs/2012.00190 (2020)
2010 – 2019
- 2019
- [c223]Christina Lohr, Johannes Kiesel, Stephanie Luther, Johannes Hellrich, Tobias Kolditz, Benno Stein, Udo Hahn:
Continuous Quality Control and Advanced Text Segment Annotation with WAT-SL 2.0. LAW@ACL 2019: 215-219 - [c222]Udo Hahn, Tinghui Duan:
Corpus Assembly as Text Data Integration from Digital Libraries and the Web. JCDL 2019: 25-28 - [c221]Johannes Hellrich, Sven Buechel, Udo Hahn:
Modeling Word Emotion in Historical Language: Quantity Beats Supposed Stability in Seed Word Selection. LaTeCH@NAACL-HLT 2019: 1-11 - [c220]Tobias Kolditz, Christina Lohr, Johannes Hellrich, Luise Modersohn, Boris Betz, Michael Kiehntopf, Udo Hahn:
Annotating German Clinical Documents for De-Identification. MedInfo 2019: 203-207 - [c219]Elisabeth Eder, Ulrike Krieg-Holz, Udo Hahn:
De-Identification of Emails: Pseudonymizing Privacy-Sensitive Data in a German Email Corpus. RANLP 2019: 259-269 - [c218]Erik Faessler, Udo Hahn, Michel Oleynik:
JULIE Lab & Med Uni Graz @ TREC 2019 Precision Medicine Track. TREC 2019 - [i18]Sven Buechel, Simon Junker, Thore Schlaak, Claus Michelsen, Udo Hahn:
A Time Series Analysis of Emotional Loading in Central Bank Statements. CoRR abs/1911.11522 (2019) - 2018
- [c217]Sebastian G. M. Händschke, Sven Buechel, Jan Goldenstein, Philipp Poschmann, Tinghui Duan, Peter Walgenbach, Udo Hahn:
A Corpus of Corporate Annual and Social Responsibility Reports: 280 Million Tokens of Balanced Organizational Writing. ECONLP@ACL 2018: 20-31 - [c216]Christina Lohr, Stephanie Luther, Franz Matthies, Udo Hahn:
CDA-compliant section annotation of German-language discharge summaries: Guideline development, annotation campaign, section classification. AMIA 2018 - [c215]Johannes Hellrich, Sven Buechel, Udo Hahn:
JeSemE: Interleaving Semantics and Emotions in a Web Service for the Exploration of Language Change Phenomena. COLING (Demos) 2018: 10-14 - [c214]Sven Buechel, Udo Hahn:
Emotion Representation Mapping for Automatic Lexicon Construction (Mostly) Performs on Human Level. COLING 2018: 2892-2904 - [c213]Johannes Hellrich, Alexander Stöger, Udo Hahn:
Wenn der Funke überspringt - Word Embeddings im Dienst der Wissenschaftsgeschichte. DHd 2018 - [c212]Erik Faessler, Udo Hahn:
Annotation Data Management with JeDIS. DocEng 2018: 42:1-42:4 - [c211]Sven Buechel, Udo Hahn:
Representation Mapping: A Novel Approach to Generate High-Quality Multi-Lingual Emotion Lexicons. LREC 2018 - [c210]Christina Lohr, Sven Buechel, Udo Hahn:
Sharing Copies of Synthetic Clinical Corpora without Physical Distribution - A Case Study to Get Around IPRs and Privacy Constraints Featuring the German JSYNCC Corpus. LREC 2018 - [c209]Udo Hahn, Franz Matthies, Christina Lohr, Markus Löffler:
3000PA - Towards a National Reference Corpus of German Clinical Language. MIE 2018: 26-30 - [c208]Sven Buechel, Udo Hahn:
Word Emotion Induction for Multiple Languages as a Deep Multi-Task Learning Problem. NAACL-HLT 2018: 1907-1918 - [e4]Udo Hahn, Véronique Hoste, Ming-Feng Tsai:
Proceedings of the First Workshop on Economics and Natural Language Processing, ECONLP@ACL 2018, Melbourne, Australia, July 20, 2018. Association for Computational Linguistics 2018, ISBN 978-1-948087-44-5 [contents] - [i17]Johannes Hellrich, Sven Buechel, Udo Hahn:
Inducing Affective Lexical Semantics in Historical Language. CoRR abs/1806.08115 (2018) - [i16]Sven Buechel, Udo Hahn:
Emotion Representation Mapping for Automatic Lexicon Construction (Mostly) Performs on Human Level. CoRR abs/1806.08890 (2018) - [i15]Sven Buechel, Udo Hahn:
Representation Mapping: A Novel Approach to Generate High-Quality Multi-Lingual Emotion Lexicons. CoRR abs/1807.00775 (2018) - [i14]Johannes Hellrich, Sven Buechel, Udo Hahn:
JeSemE: A Website for Exploring Diachronic Changes in Word Meaning and Emotion. CoRR abs/1807.04148 (2018) - [i13]Johannes Hellrich, Bernd Kampe, Udo Hahn:
Downsampling Strategies are Crucial for Word Embedding Reliability. CoRR abs/1808.06810 (2018) - 2017
- [c207]Johannes Hellrich, Udo Hahn:
Exploring Diachronic Lexical Semantics with JeSemE. ACL (System Demonstrations) 2017: 31-36 - [c206]Erik Faessler, Udo Hahn:
Semedico: A Comprehensive Semantic Search Engine for the Life Sciences. ACL (System Demonstrations) 2017: 91-96 - [c205]Sven Buechel, Udo Hahn:
Readers vs. Writers vs. Texts: Coping with Different Perspectives of Text Understanding in Emotion Annotation. LAW@ACL 2017: 1-12 - [c204]Sven Buechel, Udo Hahn:
A Flexible Mapping Scheme for Discrete and Dimensional Emotion Representations. CogSci 2017 - [c203]Johannes Hellrich, Franz Matthies, Udo Hahn:
UIMA als Plattform für die nachhaltige Software-Entwicklung in den Digital Humanities. DHd 2017 - [c202]Sven Buechel, Johannes Hellrich, Udo Hahn:
The Course of Emotion in Three Centuries of German Text-A Methodological Framework. DH 2017 - [c201]Johannes Hellrich, Udo Hahn:
Don't Get Fooled by Word Embeddings-Better Watch their Neighborhood. DH 2017 - [c200]Sven Buechel, Udo Hahn:
EmoBank: Studying the Impact of Annotation Perspective and Representation Format on Dimensional Emotion Analysis. EACL (2) 2017: 578-585 - [c199]Franz Matthies, Udo Hahn:
Scholarly Information Extraction Is Going to Make a Quantum Leap with PubMed Central (PMC)® - But Moving from Abstracts to Full Texts Seems Harder than Expected. MedInfo 2017: 521-525 - [c198]Friederike Klan, Erik Faessler, Alsayed Algergawy, Birgitta König-Ries, Udo Hahn:
Integrated Semantic Search on Structured and Unstructured Data in the ADOnIS System. S4BioDiv@ISWC 2017 - 2016
- [c197]Johannes Hellrich, Udo Hahn:
Bad Company - Neighborhoods in Neural Embedding Spaces Considered Harmful. COLING 2016: 2785-2796 - [c196]Johannes Hellrich, Udo Hahn:
Romantik im Wandel der Zeit - eine quantitative Untersuchung. DHd 2016 - [c195]Johannes Hellrich, Udo Hahn:
Measuring the Dynamics of Lexico-Semantic Change Since the German Romantic Period. DH 2016: 545-547 - [c194]Sven Buechel, Udo Hahn:
Emotion Analysis as a Regression Problem - Dimensional Models and Their Implications on Emotion Representation and Metrical Evaluation. ECAI 2016: 1114-1122 - [c193]Erik Faessler, Friederike Klan, Alsayed Algergawy, Birgitta König-Ries, Udo Hahn:
Selecting and Tailoring Ontologies with JOYCE. EKAW (Satellite Events) 2016: 114-118 - [c192]Johannes Hellrich, Udo Hahn:
An Assessment of Experimental Protocols for Tracing Changes in Word Semantics Relative to Accuracy and Reliability. LaTeCH@ACL 2016 - [c191]Udo Hahn, Franz Matthies, Erik Faessler, Johannes Hellrich:
UIMA-Based JCoRe 2.0 Goes GitHub and Maven Central ― State-of-the-Art Software Resource Engineering and Distribution of NLP Pipelines. LREC 2016 - [c190]Ulrike Krieg-Holz, Christian Schuschnig, Franz Matthies, Benjamin Redling, Udo Hahn:
CodE Alltag: A German-Language E-Mail Corpus. LREC 2016 - [c189]Sven Buechel, Johannes Hellrich, Udo Hahn:
Feelings from the Past - Adapting Affective Lexicons for Historical Emotion Analysis. LT4DH@COLING 2016: 54-61 - [c188]Sven Buechel, Udo Hahn, Jan Goldenstein, Sebastian G. M. Händschke, Peter Walgenbach:
Do Enterprises Have Emotions? WASSA@NAACL-HLT 2016: 147-153 - 2015
- [c187]Johannes Hellrich, Stefan Schulz, Sven Buechel, Udo Hahn:
JUFIT: A Configurable Rule Engine for Filtering and Generating New Multilingual UMLS Terms. AMIA 2015 - [c186]Ulrike Krieg-Holz, Udo Hahn:
Parameter zur Klassifizierung stilistischer Varianz bei E-Mails. DHd 2015 - [c185]Johannes Hellrich, Franz Matthies, Erik Faessler, Udo Hahn:
Sharing Models and Tools for Processing German Clinical Texts. MIE 2015: 734-738 - [c184]Johannes Hellrich, Udo Hahn:
Adding Multilingual Terminological Resources to Parallel Corpora for Statistical Machine Translation Deteriorates System Performance: A Negative Result from Experiments in the Biomedical Domain. TSD 2015: 506-514 - 2014
- [c183]Johannes Hellrich, Udo Hahn:
Fostering Multilinguality in the UMLS: A Computational Approach to Terminology Expansion for Multiple Languages. AMIA 2014 - [c182]Christine Engelmann, Udo Hahn:
An Empirically Grounded Approach to Extend the Linguistic Coverage and Lexical Diversity of Verbal Probabilities. CogSci 2014 - [c181]Johannes Hellrich, Simon Clematide, Udo Hahn, Dietrich Rebholz-Schuhmann:
Collaboratively Annotating Multilingual Parallel Corpora in the Biomedical Domain―some MANTRAs. LREC 2014: 4033-4040 - [c180]Erik Faessler, Johannes Hellrich, Udo Hahn:
Disclose Models, Hide the Data - How to Make Use of Confidential Corpora without Seeing Sensitive Raw Data. LREC 2014: 4230-4237 - [c179]Johannes Hellrich, Udo Hahn:
Exploiting Parallel Corpora to Scale Up Multilingual Biomedical Terminologies. MIE 2014: 575-578 - [c178]Johannes Hellrich, Udo Hahn:
Enhancing Multilingual Biomedical Terminologies via Machine Translation from Parallel Corpora. NLDB 2014: 9-20 - [c177]Udo Hahn, Christine Engelmann:
Grounding Epistemic Modality in Speakers' Judgments. PRICAI 2014: 654-667 - 2013
- [c176]Johannes Hellrich, Udo Hahn:
The JULIE LAB MANTRA System for the CLEF-ER 2013 Challenge. CLEF (Working Notes) 2013 - [c175]Dietrich Rebholz-Schuhmann, Simon Clematide, Fabio Rinaldi, Senay Kafkas, Erik M. van Mulligen, Quoc-Chinh Bui, Johannes Hellrich, Ian Lewin, David Milward, Michael Poprat, Antonio Jimeno-Yepes, Udo Hahn, Jan A. Kors:
Entity Recognition in Parallel Multi-lingual Biomedical Corpora: The CLEF-ER Laboratory Overview. CLEF 2013: 353-367 - [c174]Dietrich Rebholz-Schuhmann, Simon Clematide, Fabio Rinaldi, Senay Kafkas, Erik M. van Mulligen, Quoc-Chinh Bui, Johannes Hellrich, Ian Lewin, David Milward, Michael Poprat, Antonio Jimeno-Yepes, Udo Hahn, Jan A. Kors:
Multilingual Semantic Resources and Parallel Corpora in the Biomedical Domain: the CLEF-ER Challenge. CLEF (Working Notes) 2013 - [c173]Bente Maegaard, Udo Hahn, Søren Brunak, Stefan Schulz, Ulrich Andersen, Sebastian Welter:
Question Answering for Health Professionals and Laypersons. MedInfo 2013: 1244 - [c172]Graciela Gonzalez, Kevin Bretonnel Cohen, Casey S. Greene, Udo Hahn, Maricel G. Kann, Robert Leaman, Nigam Shah, Jieping Ye:
Session introduction. Pacific Symposium on Biocomputing 2013: 368-372 - 2012
- [j39]Udo Hahn, Kevin Bretonnel Cohen, Yael Garten, Nigam H. Shah:
Mining the pharmacogenomics literature - a survey of the state of the art. Briefings Bioinform. 13(4): 460-494 (2012) - [j38]Elena Beisswanger, Udo Hahn:
Towards valid and reusable reference alignments - ten basic quality checks for ontology alignments and their application to three different reference data sets. J. Biomed. Semant. 3(S-1): S4 (2012) - [c171]Udo Hahn, Elena Beisswanger, Ekaterina Buyko, Erik Faessler:
Active Learning-Based Corpus Annotation - The PathoJen Experience. AMIA 2012 - [c170]Senay Kafkas, Ian Lewin, David Milward, Erik M. van Mulligen, Jan A. Kors, Udo Hahn, Dietrich Rebholz-Schuhmann:
CALBC: Releasing the Final Corpora. LREC 2012: 2923-2926 - [c169]Udo Hahn, Elena Beisswanger, Ekaterina Buyko, Erik Faessler, Jenny Traumüller, Susann Schröder, Kerstin Hornbostel:
Iterative Refinement and Quality Checking of Annotation Guidelines - How to Deal Effectively with Semantically Sloppy Named Entity Types, such as Pathological Phenomena. LREC 2012: 3881-3885 - [c168]Kevin Bretonnel Cohen, Yael Garten, Nigam Shah, Udo Hahn:
Session introduction. Pacific Symposium on Biocomputing 2012: 375 - [c167]Ekaterina Buyko, Elena Beisswanger, Udo Hahn:
The Extraction of Pharmacogenetic and Pharmacogenomic Relations - A Case Study Using PharmGKB. Pacific Symposium on Biocomputing 2012: 376-387 - 2011
- [j37]Dietrich Rebholz-Schuhmann, Fabio Rinaldi, Sampo Pyysalo, Nigel Collier, Udo Hahn:
Towards mature use of semantic resources for biomedical analyses. J. Biomed. Semant. 2(S-5): I1 (2011) - [j36]Dietrich Rebholz-Schuhmann, Antonio Jimeno-Yepes, Chen Li, Senay Kafkas, Ian Lewin, Ning Kang, Peter T. Corbett, David Milward, Ekaterina Buyko, Elena Beisswanger, Kerstin Hornbostel, Alexandre Kouznetsov, René Witte, Jonas B. Laurila, Christopher J. O. Baker, Cheng-Ju Kuo, Simon Clematide, Fabio Rinaldi, Richárd Farkas, György Móra, Kazuo Hara, Laura Inés Furlong, Michael Rautschka, Mariana L. Neves, Alberto D. Pascual-Montano, Qi Wei, Nigel Collier, Md. Faisal Mahbub Chowdhury, Alberto Lavelli, Rafael Berlanga Llavori, Roser Morante, Vincent Van Asch, Walter Daelemans, José Luís Marina, Erik M. van Mulligen, Jan A. Kors, Udo Hahn:
Assessment of NER solutions against the first and second CALBC Silver Standard Corpus. J. Biomed. Semant. 2(S-5): S11 (2011) - [j35]Yoshinobu Kano, Jari Björne, Filip Ginter, Tapio Salakoski, Ekaterina Buyko, Udo Hahn, K. Bretonnel Cohen, Karin Verspoor, Christophe Roeder, Lawrence E. Hunter, Halil Kilicoglu, Sabine Bergler, Sofie Van Landeghem, Thomas Van Parys, Yves Van de Peer, Makoto Miwa, Sophia Ananiadou, Mariana L. Neves, Alberto D. Pascual-Montano, Arzucan Özgür, Dragomir R. Radev, Sebastian Riedel, Rune Sætre, Hong-Woo Chun, Jin-Dong Kim, Sampo Pyysalo, Tomoko Ohta, Jun'ichi Tsujii:
U-Compare bio-event meta-service: compatible BioNLP event extraction services. BMC Bioinform. 12: 481 (2011) - [j34]Ekaterina Buyko, Erik Faessler, Joachim Wermter, Udo Hahn:
Syntactic Simplification and Semantic Enrichment - Trimming Dependency Graphs for Event Extraction. Comput. Intell. 27(4): 610-644 (2011) - [c166]Ekaterina Buyko, Jörg Linde, Steffen Priebe, Udo Hahn:
Towards Automatic Pathway Generation from Biological Full-Text Publications. IDA 2011: 67-79 - [c165]Kevin Bretonnel Cohen, Yael Garten, Udo Hahn, Nigam H. Shah:
Workshop Introduction. Pacific Symposium on Biocomputing 2011: 362-363 - [c164]Ekaterina Buyko, Udo Hahn:
Generating Semantics for the Life Sciences via Text Analytics. ICSC 2011: 193-196 - [e3]Nigel Collier, Udo Hahn, Dietrich Rebholz-Schuhmann, Fabio Rinaldi, Sampo Pyysalo:
Proceedings of the Fourth International Symposium for Semantic Mining in Biomedicine, Cambridge, United Kingdom, October, 2010. CEUR Workshop Proceedings 714, CEUR-WS.org 2011 [contents] - 2010
- [j33]Udo Hahn:
Introduction to Linguistic Annotation and Text Analytics Graham Wilcock (University of Helsinki) Princeton, NJ: Morgan & Claypool (Synthesis Lectures on Human Language Technologies, edited by Graeme Hirst, volume 2, No. 1), 2009, x+149 pp; paperbound, ISBN 978-1-59829-738-6, $40.00; ebook, ISBN 978-1-59829-739-3, $30.00 or by subscription. Comput. Linguistics 36(4): 765-766 (2010) - [j32]Dietrich Rebholz-Schuhmann, Antonio Jimeno-Yepes, Erik M. van Mulligen, Ning Kang, Jan A. Kors, David Milward, Peter T. Corbett, Ekaterina Buyko, Elena Beisswanger, Udo Hahn:
Calbc Silver Standard Corpus. J. Bioinform. Comput. Biol. 8(1): 163-179 (2010) - [c163]Katrin Tomanek, Udo Hahn, Steffen Lohmann, Jürgen Ziegler:
A Cognitive Cost Model of Annotations Based on Eye-Tracking Data. ACL 2010: 1158-1167 - [c162]Udo Hahn, Katrin Tomanek, Elena Beisswanger, Erik Faessler:
A Proposal for a Configurable Silver Standard. Linguistic Annotation Workshop 2010: 235-242 - [c161]Katrin Tomanek, Udo Hahn:
A Comparison of Models for Cost-Sensitive Active Learning. COLING (Posters) 2010: 1247-1255 - [c160]Ekaterina Buyko, Udo Hahn:
Evaluating the Impact of Alternative Dependency Graph Encodings on Solving Event Extraction Tasks. EMNLP 2010: 982-992 - [c159]Ekaterina Buyko, Elena Beisswanger, Udo Hahn:
The GeneReg Corpus for Gene Expression Regulation Events - An Overview of the Corpus and its In-Domain and Out-of-Domain Interoperability. LREC 2010 - [c158]Dietrich Rebholz-Schuhmann, Antonio José Jimeno-Yepes, Erik M. van Mulligen, Ning Kang, Jan A. Kors, David Milward, Peter T. Corbett, Ekaterina Buyko, Katrin Tomanek, Elena Beisswanger, Udo Hahn:
The CALBC Silver Standard Corpus for Biomedical Named Entities - A Study in Harmonizing the Contributions from Four Independent Named Entity Taggers. LREC 2010 - [c157]Katrin Tomanek, Udo Hahn:
Annotation Time Stamps - Temporal Metadata from the Linguistic Annotation Process. LREC 2010 - [c156]Elena Beisswanger, Joachim Wermter, Udo Hahn:
Aligning UniProt and MeSH - A Case Study on Human Protein Terms. MedInfo 2010: 1030-1034 - [c155]Dietrich Rebholz-Schuhmann, Antonio Jimeno-Yepes, Chen Li, Senay Kafkas, Ian Lewin, Ning Kang, Peter T. Corbett, David Milward, Ekaterina Buyko, Elena Beisswanger, Kerstin Hornbostel, Alexandre Kouznetsov, René Witte, Jonas B. Laurila, Christopher J. O. Baker, Cheng-Ju Kuo, Simon Clematide, Fabio Rinaldi, Richárd Farkas, György Móra, Kazuo Hara, Laura Inés Furlong, Michael Rautschka, Mariana L. Neves, Alberto D. Pascual-Montano, Qi Wei, Nigel Collier, Md. Faisal Mahbub Chowdhury, Alberto Lavelli, Rafael Berlanga Llavori, Roser Morante, Vincent Van Asch, Walter Daelemans, José Luís Marina, Erik M. van Mulligen, Jan A. Kors, Udo Hahn:
Assessment of NER solutions against the first and second CALBC silver standard corpus. Semantic Mining in Biomedicine 2010
2000 – 2009
- 2009
- [j31]Joachim Wermter, Katrin Tomanek, Udo Hahn:
High-performance gene name normalization with GENO. Bioinform. 25(6): 815-821 (2009) - [j30]David S. DeLuca, Elena Beisswanger, Joachim Wermter, Peter A. Horn, Udo Hahn, Rainer Blasczyk:
MaHCO: an ontology of the major histocompatibility complex for immunoinformatic applications and text mining. Bioinform. 25(16): 2064-2070 (2009) - [c154]Katrin Tomanek, Udo Hahn:
Semi-Supervised Active Learning for Sequence Labeling. ACL/IJCNLP 2009: 1039-1047 - [c153]Katrin Tomanek, Udo Hahn:
Timed Annotations - Enhancing MUC7 Metadata by the Time It Takes to Annotate Named Entities. Linguistic Annotation Workshop 2009: 112-115 - [c152]Ekaterina Buyko, Erik Faessler, Joachim Wermter, Udo Hahn:
Event Extraction from Trimmed Dependency Graphs. BioNLP@HLT-NAACL (Shared Task) 2009: 19-27 - [c151]Udo Hahn, Katrin Tomanek, Ekaterina Buyko, Jung-Jae Kim, Dietrich Rebholz-Schuhmann:
How Feasible and Robust is the Automatic Extraction of Gene Regulation Events? A Cross-Method Evaluation under Lab and Real-Life Conditions. BioNLP@HLT-NAACL 2009: 37-45 - [c150]Katrin Tomanek, Udo Hahn:
Reducing class imbalance during active learning for named entity annotation. K-CAP 2009: 105-112 - [c149]Joachim Wermter, Udo Hahn, Rico Landefeld, Anne Schneider:
Do User Appreciate Novel Interface Features for Literature Search? - A User Study in the Life Sciences Domain. SMC 2009: 2062-2067 - 2008
- [j29]Elena Beisswanger, Stefan Schulz, Holger Stenzhorn, Udo Hahn:
BioTop: An upper domain ontology for the life sciencesA description of its current structure, contents and interfaces to OBO ontologies. Appl. Ontology 3(4): 205-212 (2008) - [c148]Michael Poprat, Elena Beisswanger, Udo Hahn