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@article{DBLP:journals/biodatamining/AbbasiYHAM20,
  author    = {Wajid Arshad Abbasi and
               Adiba Yaseen and
               Fahad Ul Hassan and
               Saiqa Andleeb and
               Fayyaz ul Amir Afsar Minhas},
  title     = {{ISLAND:} in-silico proteins binding affinity prediction using sequence
               information},
  journal   = {BioData Min.},
  volume    = {13},
  number    = {1},
  pages     = {20},
  year      = {2020},
  url       = {https://doi.org/10.1186/s13040-020-00231-w},
  doi       = {10.1186/s13040-020-00231-w},
  timestamp = {Thu, 07 Jan 2021 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/AbbasiYHAM20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ChenHZTYF20,
  author    = {Dan Chen and
               Jun Hu and
               Mei Zhu and
               Niansheng Tang and
               Yang Yang and
               Yuran Feng},
  title     = {Diagnosis of thyroid nodules for ultrasonographic characteristics
               indicative of malignancy using random forest},
  journal   = {BioData Min.},
  volume    = {13},
  number    = {1},
  pages     = {14},
  year      = {2020},
  url       = {https://doi.org/10.1186/s13040-020-00223-w},
  doi       = {10.1186/s13040-020-00223-w},
  timestamp = {Thu, 07 Jan 2021 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ChenHZTYF20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/FajardaDSO20,
  author    = {Olga Fajarda and
               Sara Duarte{-}Pereira and
               Raquel M. Silva and
               Jos{\'{e}} Lu{\'{\i}}s Oliveira},
  title     = {Merging microarray studies to identify a common gene expression signature
               to several structural heart diseases},
  journal   = {BioData Min.},
  volume    = {13},
  number    = {1},
  pages     = {8},
  year      = {2020},
  url       = {https://doi.org/10.1186/s13040-020-00217-8},
  doi       = {10.1186/s13040-020-00217-8},
  timestamp = {Thu, 21 Jan 2021 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/FajardaDSO20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/GaoSS20,
  author    = {Kai Gao and
               Yan{-}Ping Song and
               Anna Song},
  title     = {Exploring active ingredients and function mechanisms of Ephedra-bitter
               almond for prevention and treatment of Corona virus disease 2019 {(COVID-19)}
               based on network pharmacology},
  journal   = {BioData Min.},
  volume    = {13},
  number    = {1},
  pages     = {19},
  year      = {2020},
  url       = {https://doi.org/10.1186/s13040-020-00229-4},
  doi       = {10.1186/s13040-020-00229-4},
  timestamp = {Thu, 07 Jan 2021 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/GaoSS20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/GuoWWZCL20,
  author    = {Long{-}Yi Guo and
               Ai{-}Hua Wu and
               Yong{-}xia Wang and
               Li{-}ping Zhang and
               Hua Chai and
               Xue{-}Fang Liang},
  title     = {Deep learning-based ovarian cancer subtypes identification using multi-omics
               data},
  journal   = {BioData Min.},
  volume    = {13},
  number    = {1},
  pages     = {10},
  year      = {2020},
  url       = {https://doi.org/10.1186/s13040-020-00222-x},
  doi       = {10.1186/s13040-020-00222-x},
  timestamp = {Thu, 07 Jan 2021 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/GuoWWZCL20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/HuWWZJQXZPM20,
  author    = {Qichao Hu and
               Shizhang Wei and
               Jianxia Wen and
               Wenwen Zhang and
               Yinxiao Jiang and
               Caiyan Qu and
               Junbao Xiang and
               Yanling Zhao and
               Xi Peng and
               Xiao Ma},
  title     = {Network pharmacology reveals the multiple mechanisms of Xiaochaihu
               decoction in the treatment of non-alcoholic fatty liver disease},
  journal   = {BioData Min.},
  volume    = {13},
  number    = {1},
  pages     = {11},
  year      = {2020},
  url       = {https://doi.org/10.1186/s13040-020-00224-9},
  doi       = {10.1186/s13040-020-00224-9},
  timestamp = {Thu, 07 Jan 2021 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/HuWWZJQXZPM20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/HuangZNLCLTL20,
  author    = {Ying Huang and
               Wen{-}jiang Zheng and
               Yong{-}shi Ni and
               Mian{-}sha Li and
               Jian{-}kun Chen and
               Xiao{-}hong Liu and
               Xinghua Tan and
               Ji{-}qiang Li},
  title     = {Therapeutic mechanism of Toujie Quwen granules in {COVID-19} based
               on network pharmacology},
  journal   = {BioData Min.},
  volume    = {13},
  number    = {1},
  pages     = {15},
  year      = {2020},
  url       = {https://doi.org/10.1186/s13040-020-00225-8},
  doi       = {10.1186/s13040-020-00225-8},
  timestamp = {Thu, 07 Jan 2021 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/HuangZNLCLTL20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/JianSZX20,
  author    = {Gong{-}hui Jian and
               Bing{-}zhu Su and
               Wen{-}jia Zhou and
               Hui Xiong},
  title     = {Application of network pharmacology and molecular docking to elucidate
               the potential mechanism of Eucommia ulmoides-Radix Achyranthis Bidentatae
               against osteoarthritis},
  journal   = {BioData Min.},
  volume    = {13},
  number    = {1},
  pages     = {12},
  year      = {2020},
  url       = {https://doi.org/10.1186/s13040-020-00221-y},
  doi       = {10.1186/s13040-020-00221-y},
  timestamp = {Thu, 07 Jan 2021 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/JianSZX20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LeeIGDBAD20,
  author    = {Hao{-}Chih Lee and
               Osamu Ichikawa and
               Benjamin S. Glicksberg and
               Aparna A. Divaraniya and
               Christine E. Becker and
               Pankaj Agarwal and
               Joel T. Dudley},
  title     = {Identification of therapeutic targets from genetic association studies
               using hierarchical component analysis},
  journal   = {BioData Min.},
  volume    = {13},
  number    = {1},
  pages     = {6},
  year      = {2020},
  url       = {https://doi.org/10.1186/s13040-020-00216-9},
  doi       = {10.1186/s13040-020-00216-9},
  timestamp = {Thu, 21 Jan 2021 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LeeIGDBAD20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LiLBSLW20,
  author    = {Shiyan Li and
               Hongxin Liu and
               Shiyu Bian and
               Xianzheng Sha and
               Yixue Li and
               Yin Wang},
  title     = {The accelerated aging model reveals critical mechanisms of late-onset
               Parkinson's disease},
  journal   = {BioData Min.},
  volume    = {13},
  number    = {1},
  pages     = {4},
  year      = {2020},
  url       = {https://doi.org/10.1186/s13040-020-00215-w},
  doi       = {10.1186/s13040-020-00215-w},
  timestamp = {Thu, 07 Jan 2021 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LiLBSLW20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LiuSL20,
  author    = {Tao Liu and
               Kaiwen Shi and
               Wuju Li},
  title     = {Deep learning methods improve linear B-cell epitope prediction},
  journal   = {BioData Min.},
  volume    = {13},
  number    = {1},
  pages     = {1},
  year      = {2020},
  url       = {https://doi.org/10.1186/s13040-020-00211-0},
  doi       = {10.1186/s13040-020-00211-0},
  timestamp = {Fri, 08 Jan 2021 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LiuSL20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MaganaCKRGZMESL20,
  author    = {J. Maga{\~{n}}a and
               M. G. Contreras and
               Kevin L. Keys and
               O. Risse{-}Adams and
               P. C. Goddard and
               A. M. Zeiger and
               Angel C. Y. Mak and
               J. R. Elhawary and
               L. A. Samedy{-}Bates and
               E. Lee and
               N. Thakur and
               D. Hu and
               C. Eng and
               S. Salazar and
               S. Huntsman and
               T. Hu and
               Esteban Gonz{\`{a}}lez Burchard and
               M. J. White},
  title     = {An epistatic interaction between pre-natal smoke exposure and socioeconomic
               status has a significant impact on bronchodilator drug response in
               African American youth with asthma},
  journal   = {BioData Min.},
  volume    = {13},
  number    = {1},
  pages     = {7},
  year      = {2020},
  url       = {https://doi.org/10.1186/s13040-020-00218-7},
  doi       = {10.1186/s13040-020-00218-7},
  timestamp = {Thu, 07 Jan 2021 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MaganaCKRGZMESL20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MalinkaZK20,
  author    = {Frantisek Malinka and
               Filip Zelezn{\'{y}} and
               Jir{\'{\i}} Kl{\'{e}}ma},
  title     = {Finding semantic patterns in omics data using concept rule learning
               with an ontology-based refinement operator},
  journal   = {BioData Min.},
  volume    = {13},
  number    = {1},
  pages     = {13},
  year      = {2020},
  url       = {https://doi.org/10.1186/s13040-020-00219-6},
  doi       = {10.1186/s13040-020-00219-6},
  timestamp = {Thu, 07 Jan 2021 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MalinkaZK20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Moore20,
  author    = {Jason H. Moore},
  title     = {Ten important roles for academic leaders in data science},
  journal   = {BioData Min.},
  volume    = {13},
  number    = {1},
  pages     = {18},
  year      = {2020},
  url       = {https://doi.org/10.1186/s13040-020-00228-5},
  doi       = {10.1186/s13040-020-00228-5},
  timestamp = {Thu, 07 Jan 2021 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Moore20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MooreBBCDGHHHKM20,
  author    = {Jason H. Moore and
               Ian Barnett and
               Mary Regina Boland and
               Yong Chen and
               George Demiris and
               Graciela Gonzalez{-}Hernandez and
               Daniel S. Herman and
               Blanca E. Himes and
               Rebecca A. Hubbard and
               Dokyoon Kim and
               Jeffrey S. Morris and
               Danielle L. Mowery and
               Marylyn D. Ritchie and
               Li Shen and
               Ryan J. Urbanowicz and
               John H. Holmes},
  title     = {Ideas for how informaticians can get involved with {COVID-19} research},
  journal   = {BioData Min.},
  volume    = {13},
  number    = {1},
  pages     = {3},
  year      = {2020},
  url       = {https://doi.org/10.1186/s13040-020-00213-y},
  doi       = {10.1186/s13040-020-00213-y},
  timestamp = {Thu, 21 Jan 2021 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MooreBBCDGHHHKM20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/SipperM20,
  author    = {Moshe Sipper and
               Jason H. Moore},
  title     = {Conservation machine learning},
  journal   = {BioData Min.},
  volume    = {13},
  number    = {1},
  pages     = {9},
  year      = {2020},
  url       = {https://doi.org/10.1186/s13040-020-00220-z},
  doi       = {10.1186/s13040-020-00220-z},
  timestamp = {Thu, 07 Jan 2021 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/SipperM20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ThangarajKLET20,
  author    = {Phyllis M. Thangaraj and
               Benjamin Kummer and
               Tal Lorberbaum and
               Mitchell S. V. Elkind and
               Nicholas P. Tatonetti},
  title     = {Comparative analysis, applications, and interpretation of electronic
               health record-based stroke phenotyping methods},
  journal   = {BioData Min.},
  volume    = {13},
  number    = {1},
  pages     = {21},
  year      = {2020},
  url       = {https://doi.org/10.1186/s13040-020-00230-x},
  doi       = {10.1186/s13040-020-00230-x},
  timestamp = {Thu, 21 Jan 2021 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ThangarajKLET20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/YeganehRSLM20,
  author    = {Pourya Naderi Yeganeh and
               Chrsitine Richardson and
               Erik Saule and
               Ann Loraine and
               M. Taghi Mostafavi},
  title     = {Revisiting the use of graph centrality models in biological pathway
               analysis},
  journal   = {BioData Min.},
  volume    = {13},
  number    = {1},
  pages     = {5},
  year      = {2020},
  url       = {https://doi.org/10.1186/s13040-020-00214-x},
  doi       = {10.1186/s13040-020-00214-x},
  timestamp = {Thu, 07 Jan 2021 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/YeganehRSLM20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/YouLCWHLGZLQ20,
  author    = {Jie{-}shu You and
               Chen{-}yue Li and
               Wei Chen and
               Xia{-}lin Wu and
               Li{-}jie Huang and
               Ren{-}kai Li and
               Fei Gao and
               Ming{-}yue Zhang and
               Huan{-}lan Liu and
               Wei{-}ling Qu},
  title     = {A network pharmacology-based study on Alzheimer disease prevention
               and treatment of Qiong Yu Gao},
  journal   = {BioData Min.},
  volume    = {13},
  number    = {1},
  pages     = {2},
  year      = {2020},
  url       = {https://doi.org/10.1186/s13040-020-00212-z},
  doi       = {10.1186/s13040-020-00212-z},
  timestamp = {Thu, 07 Jan 2021 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/YouLCWHLGZLQ20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ZhengYNZYZLJ20,
  author    = {Wen{-}jiang Zheng and
               Qian Yan and
               Yongzhi Ni and
               Shao{-}feng Zhan and
               Liu{-}liu Yang and
               Hong{-}fa Zhuang and
               Xiao{-}hong Liu and
               Yong Jiang},
  title     = {Examining the effector mechanisms of Xuebijing injection on {COVID-19}
               based on network pharmacology},
  journal   = {BioData Min.},
  volume    = {13},
  number    = {1},
  pages     = {17},
  year      = {2020},
  url       = {https://doi.org/10.1186/s13040-020-00227-6},
  doi       = {10.1186/s13040-020-00227-6},
  timestamp = {Thu, 07 Jan 2021 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ZhengYNZYZLJ20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ZhouVLLMKGH20,
  author    = {Jie Zhou and
               Weston D. Viles and
               Boran Lu and
               Zhigang Li and
               Juliette C. Madan and
               Margaret R. Karagas and
               Jiang Gui and
               Anne Gatewood Hoen},
  title     = {Identification of microbial interaction network: zero-inflated latent
               Ising model based approach},
  journal   = {BioData Min.},
  volume    = {13},
  number    = {1},
  pages     = {16},
  year      = {2020},
  url       = {https://doi.org/10.1186/s13040-020-00226-7},
  doi       = {10.1186/s13040-020-00226-7},
  timestamp = {Thu, 07 Jan 2021 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ZhouVLLMKGH20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/BiTQYMGS19,
  author    = {Jia{-}Hao Bi and
               Yi{-}Fan Tong and
               Zhe{-}Wei Qiu and
               Xing{-}Feng Yang and
               John D. Minna and
               Adi F. Gazdar and
               Kai Song},
  title     = {ClickGene: an open cloud-based platform for big pan-cancer data genome-wide
               association study, visualization and exploration},
  journal   = {BioData Min.},
  volume    = {12},
  number    = {1},
  pages     = {12:1--12:15},
  year      = {2019},
  url       = {https://doi.org/10.1186/s13040-019-0202-3},
  doi       = {10.1186/s13040-019-0202-3},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/BiTQYMGS19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/BittrichKLKVL19,
  author    = {Sebastian Bittrich and
               Marika Kaden and
               Christoph Leberecht and
               Florian Kaiser and
               Thomas Villmann and
               Dirk Labudde},
  title     = {Application of an interpretable classification model on Early Folding
               Residues during protein folding},
  journal   = {BioData Min.},
  volume    = {12},
  number    = {1},
  pages     = {1:1--1:16},
  year      = {2019},
  url       = {https://doi.org/10.1186/s13040-018-0188-2},
  doi       = {10.1186/s13040-018-0188-2},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/BittrichKLKVL19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/BolandALGG19,
  author    = {Mary Regina Boland and
               Snigdha Alur{-}Gupta and
               Lisa Levine and
               Peter Gabriel and
               Graciela Gonzalez{-}Hernandez},
  title     = {Disease associations depend on visit type: results from a visit-wide
               association study},
  journal   = {BioData Min.},
  volume    = {12},
  number    = {1},
  pages     = {15:1--15:10},
  year      = {2019},
  url       = {https://doi.org/10.1186/s13040-019-0203-2},
  doi       = {10.1186/s13040-019-0203-2},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/BolandALGG19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/BrionneJH19,
  author    = {Aur{\'{e}}lien Brionne and
               Am{\'{e}}lie Juanchich and
               Christelle Hennequet{-}Antier},
  title     = {ViSEAGO: a Bioconductor package for clustering biological functions
               using Gene Ontology and semantic similarity},
  journal   = {BioData Min.},
  volume    = {12},
  number    = {1},
  pages     = {16:1--16:13},
  year      = {2019},
  url       = {https://doi.org/10.1186/s13040-019-0204-1},
  doi       = {10.1186/s13040-019-0204-1},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/BrionneJH19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/EllisWGM19,
  author    = {Randall J. Ellis and
               Zichen Wang and
               Nicholas Genes and
               Avi Ma'ayan},
  title     = {Predicting opioid dependence from electronic health records with machine
               learning},
  journal   = {BioData Min.},
  volume    = {12},
  number    = {1},
  pages     = {3:1--3:19},
  year      = {2019},
  url       = {https://doi.org/10.1186/s13040-019-0193-0},
  doi       = {10.1186/s13040-019-0193-0},
  timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/EllisWGM19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/JeanquartierJH19,
  author    = {Fleur Jeanquartier and
               Claire Jean{-}Quartier and
               Andreas Holzinger},
  title     = {Use case driven evaluation of open databases for pediatric cancer
               research},
  journal   = {BioData Min.},
  volume    = {12},
  number    = {1},
  pages     = {2:1--2:20},
  year      = {2019},
  url       = {https://doi.org/10.1186/s13040-018-0190-8},
  doi       = {10.1186/s13040-018-0190-8},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/JeanquartierJH19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/JoiretJGS19,
  author    = {Marc Joiret and
               Jestinah M. Mahachie John and
               Elena S. Gusareva and
               Kristel Van Steen},
  title     = {Confounding of linkage disequilibrium patterns in large scale {DNA}
               based gene-gene interaction studies},
  journal   = {BioData Min.},
  volume    = {12},
  number    = {1},
  pages     = {11:1--11:23},
  year      = {2019},
  url       = {https://doi.org/10.1186/s13040-019-0199-7},
  doi       = {10.1186/s13040-019-0199-7},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/JoiretJGS19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LeiZ19,
  author    = {Xiujuan Lei and
               Cheng Zhang},
  title     = {Predicting metabolite-disease associations based on {KATZ} model},
  journal   = {BioData Min.},
  volume    = {12},
  number    = {1},
  pages     = {19:1--19:14},
  year      = {2019},
  url       = {https://doi.org/10.1186/s13040-019-0206-z},
  doi       = {10.1186/s13040-019-0206-z},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LeiZ19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MaHWZZW19,
  author    = {Bidong Ma and
               Zhiyou Huang and
               Qian Wang and
               Jizhou Zhang and
               Bin Zhou and
               Jiaohong Wu},
  title     = {Integrative analysis of genetic and epigenetic profiling of lung squamous
               cell carcinoma {(LSCC)} patients to identify smoking level relevant
               biomarkers},
  journal   = {BioData Min.},
  volume    = {12},
  number    = {1},
  pages     = {18:1--18:18},
  year      = {2019},
  url       = {https://doi.org/10.1186/s13040-019-0207-y},
  doi       = {10.1186/s13040-019-0207-y},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MaHWZZW19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ManduchiORM19,
  author    = {Elisabetta Manduchi and
               Patryk Orzechowski and
               Marylyn D. Ritchie and
               Jason H. Moore},
  title     = {Exploration of a diversity of computational and statistical measures
               of association for genome-wide genetic studies},
  journal   = {BioData Min.},
  volume    = {12},
  number    = {1},
  pages     = {14:1--14:16},
  year      = {2019},
  url       = {https://doi.org/10.1186/s13040-019-0201-4},
  doi       = {10.1186/s13040-019-0201-4},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ManduchiORM19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MillerVR19,
  author    = {Jason E. Miller and
               Yogasudha Veturi and
               Marylyn D. Ritchie},
  title     = {Innovative strategies for annotating the "relationSNP" between variants
               and molecular phenotypes},
  journal   = {BioData Min.},
  volume    = {12},
  number    = {1},
  pages     = {10:1--10:22},
  year      = {2019},
  url       = {https://doi.org/10.1186/s13040-019-0197-9},
  doi       = {10.1186/s13040-019-0197-9},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MillerVR19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/NetoTRAFC19,
  author    = {Habib Asseiss Neto and
               Wanessa L. F. Tavares and
               Daniela C. S. Z. Ribeiro and
               Ronnie C. O. Alves and
               Leorges M. Fonseca and
               S{\'{e}}rgio V. A. Campos},
  title     = {On the utilization of deep and ensemble learning to detect milk adulteration},
  journal   = {BioData Min.},
  volume    = {12},
  number    = {1},
  pages     = {13:1--13:13},
  year      = {2019},
  url       = {https://doi.org/10.1186/s13040-019-0200-5},
  doi       = {10.1186/s13040-019-0200-5},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/NetoTRAFC19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ParkKRJL19,
  author    = {Youngja Park and
               Taewoon Kong and
               James R. Roede and
               Dean P. Jones and
               Kichun Lee},
  title     = {A biplot correlation range for group-wise metabolite selection in
               mass spectrometry},
  journal   = {BioData Min.},
  volume    = {12},
  number    = {1},
  pages     = {4:1--4:24},
  year      = {2019},
  url       = {https://doi.org/10.1186/s13040-019-0191-2},
  doi       = {10.1186/s13040-019-0191-2},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ParkKRJL19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/RubanovZSSZL19,
  author    = {Lev I. Rubanov and
               Andrey G. Zaraisky and
               Gregory A. Shilovsky and
               Alexander V. Seliverstov and
               Oleg A. Zverkov and
               Vassily A. Lyubetsky},
  title     = {Screening for mouse genes lost in mammals with long lifespans},
  journal   = {BioData Min.},
  volume    = {12},
  number    = {1},
  pages     = {20:1--20:18},
  year      = {2019},
  url       = {https://doi.org/10.1186/s13040-019-0208-x},
  doi       = {10.1186/s13040-019-0208-x},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/RubanovZSSZL19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/SavelK19,
  author    = {Daniel M. Savel and
               Mehmet Koyut{\"{u}}rk},
  title     = {Characterizing human genomic coevolution in locus-gene regulatory
               interactions},
  journal   = {BioData Min.},
  volume    = {12},
  number    = {1},
  pages     = {8:1--8:15},
  year      = {2019},
  url       = {https://doi.org/10.1186/s13040-019-0195-y},
  doi       = {10.1186/s13040-019-0195-y},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/SavelK19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/SipperFAM19,
  author    = {Moshe Sipper and
               Weixuan Fu and
               Karuna Ahuja and
               Jason H. Moore},
  title     = {Correction to: Investigating the parameter space of evolutionary algorithms},
  journal   = {BioData Min.},
  volume    = {12},
  number    = {1},
  pages     = {22:1},
  year      = {2019},
  url       = {https://doi.org/10.1186/s13040-019-0210-3},
  doi       = {10.1186/s13040-019-0210-3},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/SipperFAM19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/SpanigH19,
  author    = {Sebastian Sp{\"{a}}nig and
               Dominik Heider},
  title     = {Encodings and models for antimicrobial peptide classification for
               multi-resistant pathogens},
  journal   = {BioData Min.},
  volume    = {12},
  number    = {1},
  pages     = {7:1--7:29},
  year      = {2019},
  url       = {https://doi.org/10.1186/s13040-019-0196-x},
  doi       = {10.1186/s13040-019-0196-x},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/SpanigH19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/SunS19,
  author    = {Lillian Sun and
               Shuying Sun},
  title     = {Within-sample co-methylation patterns in normal tissues},
  journal   = {BioData Min.},
  volume    = {12},
  number    = {1},
  pages     = {9:1--9:22},
  year      = {2019},
  url       = {https://doi.org/10.1186/s13040-019-0198-8},
  doi       = {10.1186/s13040-019-0198-8},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/SunS19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ZhangLZZM19,
  author    = {Yunkui Zhang and
               Yaochen Li and
               Rongsheng Zhang and
               Yujie Zhang and
               Haitao Ma},
  title     = {{RNSCLC-PRSP} software to predict the prognostic risk and survival
               in patients with resected {T1-3N0-2} {M0} non-small cell lung cancer},
  journal   = {BioData Min.},
  volume    = {12},
  number    = {1},
  pages     = {17:1--17:14},
  year      = {2019},
  url       = {https://doi.org/10.1186/s13040-019-0205-0},
  doi       = {10.1186/s13040-019-0205-0},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ZhangLZZM19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ZhouLZLHLCLHT19,
  author    = {Yanqiu Zhou and
               Chen Liu and
               Rongfang Zhou and
               Anzhi Lu and
               Biao Huang and
               Liling Liu and
               Ling Chen and
               Bei Luo and
               Jin Huang and
               Zhijian Tian},
  title     = {SEQdata-BEACON: a comprehensive database of sequencing performance
               and statistical tools for performance evaluation and yield simulation
               in {BGISEQ-500}},
  journal   = {BioData Min.},
  volume    = {12},
  number    = {1},
  pages     = {21:1--21:14},
  year      = {2019},
  url       = {https://doi.org/10.1186/s13040-019-0209-9},
  doi       = {10.1186/s13040-019-0209-9},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ZhouLZLHLCLHT19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Al-AjlanA18,
  author    = {Amani Al{-}Ajlan and
               Achraf El Allali},
  title     = {Feature selection for gene prediction in metagenomic fragments},
  journal   = {BioData Min.},
  volume    = {11},
  number    = {1},
  pages     = {9:1--9:12},
  year      = {2018},
  url       = {https://doi.org/10.1186/s13040-018-0170-z},
  doi       = {10.1186/s13040-018-0170-z},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Al-AjlanA18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ArabnejadDBWHM18,
  author    = {M. Arabnejad and
               Bryan A. Dawkins and
               William S. Bush and
               Bill C. White and
               A. R. Harkness and
               Brett A. McKinney},
  title     = {Transition-transversion encoding and genetic relationship metric in
               ReliefF feature selection improves pathway enrichment in {GWAS}},
  journal   = {BioData Min.},
  volume    = {11},
  number    = {1},
  pages     = {23:1--23:17},
  year      = {2018},
  url       = {https://doi.org/10.1186/s13040-018-0186-4},
  doi       = {10.1186/s13040-018-0186-4},
  timestamp = {Tue, 13 Oct 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ArabnejadDBWHM18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/BouzagloCT18,
  author    = {David Bouzaglo and
               Israel Chasida and
               Elishai Ezra Tsur},
  title     = {Distributed retrieval engine for the development of cloud-deployed
               biological databases},
  journal   = {BioData Min.},
  volume    = {11},
  number    = {1},
  pages     = {26:1--26:10},
  year      = {2018},
  url       = {https://doi.org/10.1186/s13040-018-0185-5},
  doi       = {10.1186/s13040-018-0185-5},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/BouzagloCT18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/BresterKTVRRSK18,
  author    = {Christina Brester and
               Jussi Kauhanen and
               Tomi{-}Pekka Tuomainen and
               Sari Voutilainen and
               Mauno R{\"{o}}nkk{\"{o}} and
               Kimmo Ronkainen and
               Eugene Semenkin and
               Mikko Kolehmainen},
  title     = {Evolutionary methods for variable selection in the epidemiological
               modeling of cardiovascular diseases},
  journal   = {BioData Min.},
  volume    = {11},
  number    = {1},
  pages     = {18:1--18:14},
  year      = {2018},
  url       = {https://doi.org/10.1186/s13040-018-0180-x},
  doi       = {10.1186/s13040-018-0180-x},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/BresterKTVRRSK18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/CappelliFW18,
  author    = {Eleonora Cappelli and
               Giovanni Felici and
               Emanuel Weitschek},
  title     = {Combining {DNA} methylation and {RNA} sequencing data of cancer for
               supervised knowledge extraction},
  journal   = {BioData Min.},
  volume    = {11},
  number    = {1},
  pages     = {22:1--22:23},
  year      = {2018},
  url       = {https://doi.org/10.1186/s13040-018-0184-6},
  doi       = {10.1186/s13040-018-0184-6},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/CappelliFW18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/CarrasquinhaVLV18,
  author    = {Eunice Carrasquinha and
               Andr{\'{e}} Ver{\'{\i}}ssimo and
               Marta B. Lopes and
               Susana Vinga},
  title     = {Identification of influential observations in high-dimensional cancer
               survival data through the rank product test},
  journal   = {BioData Min.},
  volume    = {11},
  number    = {1},
  pages     = {1:1--1:14},
  year      = {2018},
  url       = {https://doi.org/10.1186/s13040-018-0162-z},
  doi       = {10.1186/s13040-018-0162-z},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/CarrasquinhaVLV18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ChenTWDHG18,
  author    = {Kathleen M. Chen and
               Jie Tan and
               Gregory P. Way and
               Georgia Doing and
               Deborah A. Hogan and
               Casey S. Greene},
  title     = {PathCORE-T: identifying and visualizing globally co-occurring pathways
               in large transcriptomic compendia},
  journal   = {BioData Min.},
  volume    = {11},
  number    = {1},
  pages     = {14:1--14:20},
  year      = {2018},
  url       = {https://doi.org/10.1186/s13040-018-0175-7},
  doi       = {10.1186/s13040-018-0175-7},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ChenTWDHG18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/DorpinghausSJ18,
  author    = {Jens D{\"{o}}rpinghaus and
               Sebastian Schaaf and
               Marc Jacobs},
  title     = {Soft document clustering using a novel graph covering approach},
  journal   = {BioData Min.},
  volume    = {11},
  number    = {1},
  pages     = {11:1--11:20},
  year      = {2018},
  url       = {https://doi.org/10.1186/s13040-018-0172-x},
  doi       = {10.1186/s13040-018-0172-x},
  timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/DorpinghausSJ18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/EfimovaTPVADOKL18,
  author    = {Daria Efimova and
               Alexander V. Tyakht and
               Anna S. Popenko and
               Anatoly Vasilyev and
               Ilya A. Altukhov and
               Nikita V. Dovidchenko and
               Vera Odintsova and
               Natalya Klimenko and
               Robert Loshkarev and
               Maria Pashkova and
               Anna Elizarova and
               Viktoriya Voroshilova and
               Sergei Slavskii and
               Yury Pekov and
               Ekaterina Filippova and
               Tatiana Shashkova and
               Evgenii Levin and
               Dmitry Alexeev},
  title     = {Knomics-Biota - a system for exploratory analysis of human gut microbiota
               data},
  journal   = {BioData Min.},
  volume    = {11},
  number    = {1},
  pages     = {25:1--25:7},
  year      = {2018},
  url       = {https://doi.org/10.1186/s13040-018-0187-3},
  doi       = {10.1186/s13040-018-0187-3},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/EfimovaTPVADOKL18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/FerreroA18,
  author    = {Enrico Ferrero and
               Pankaj Agarwal},
  title     = {Connecting genetics and gene expression data for target prioritisation
               and drug repositioning},
  journal   = {BioData Min.},
  volume    = {11},
  number    = {1},
  pages     = {7:1--7:9},
  year      = {2018},
  url       = {https://doi.org/10.1186/s13040-018-0171-y},
  doi       = {10.1186/s13040-018-0171-y},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/FerreroA18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Gutierrez-Aviles18,
  author    = {David Guti{\'{e}}rrez{-}Avil{\'{e}}s and
               Ra{\'{u}}l Gir{\'{a}}ldez and
               Francisco Javier Gil{-}Cumbreras and
               Cristina Rubio{-}Escudero},
  title     = {{TRIQ:} a new method to evaluate triclusters},
  journal   = {BioData Min.},
  volume    = {11},
  number    = {1},
  pages     = {15:1--15:29},
  year      = {2018},
  url       = {https://doi.org/10.1186/s13040-018-0177-5},
  doi       = {10.1186/s13040-018-0177-5},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Gutierrez-Aviles18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LeeSKYP18,
  author    = {Seungyeoun Lee and
               Donghee Son and
               Yongkang Kim and
               Wenbao Yu and
               Taesung Park},
  title     = {Unified Cox model based multifactor dimensionality reduction method
               for gene-gene interaction analysis of the survival phenotype},
  journal   = {BioData Min.},
  volume    = {11},
  number    = {1},
  pages     = {27:1--27:13},
  year      = {2018},
  url       = {https://doi.org/10.1186/s13040-018-0189-1},
  doi       = {10.1186/s13040-018-0189-1},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LeeSKYP18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LiLDS18,
  author    = {Catherine Li and
               Juyon Lee and
               Jessica Ding and
               Shuying Sun},
  title     = {Integrative analysis of gene expression and methylation data for breast
               cancer cell lines},
  journal   = {BioData Min.},
  volume    = {11},
  number    = {1},
  pages     = {13:1--13:16},
  year      = {2018},
  url       = {https://doi.org/10.1186/s13040-018-0174-8},
  doi       = {10.1186/s13040-018-0174-8},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LiLDS18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LiLXDXH18,
  author    = {Weifu Li and
               Jing Liu and
               Chi Xiao and
               Hao Deng and
               Qiwei Xie and
               Hua Han},
  title     = {A fast forward 3D connection algorithm for mitochondria and synapse
               segmentations from serial {EM} images},
  journal   = {BioData Min.},
  volume    = {11},
  number    = {1},
  pages     = {24:1--24:15},
  year      = {2018},
  url       = {https://doi.org/10.1186/s13040-018-0183-7},
  doi       = {10.1186/s13040-018-0183-7},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LiLXDXH18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MathurRMSM18,
  author    = {Ravi Mathur and
               Daniel M. Rotroff and
               Jun Ma and
               Ali Shojaie and
               Alison A. Motsinger{-}Reif},
  title     = {Gene set analysis methods: a systematic comparison},
  journal   = {BioData Min.},
  volume    = {11},
  number    = {1},
  pages     = {8:1--8:19},
  year      = {2018},
  url       = {https://doi.org/10.1186/s13040-018-0166-8},
  doi       = {10.1186/s13040-018-0166-8},
  timestamp = {Wed, 08 Jul 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MathurRMSM18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MrzicMBMCGL18,
  author    = {Aida Mrzic and
               Pieter Meysman and
               Wout Bittremieux and
               Pieter Moris and
               Boris Cule and
               Bart Goethals and
               Kris Laukens},
  title     = {Grasping frequent subgraph mining for bioinformatics applications},
  journal   = {BioData Min.},
  volume    = {11},
  number    = {1},
  pages     = {20:1--20:24},
  year      = {2018},
  url       = {https://doi.org/10.1186/s13040-018-0181-9},
  doi       = {10.1186/s13040-018-0181-9},
  timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MrzicMBMCGL18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/NepomucenoTNA18,
  author    = {Juan A. Nepomuceno and
               Alicia Troncoso and
               Isabel A. Nepomuceno{-}Chamorro and
               Jes{\'{u}}s S. Aguilar{-}Ruiz},
  title     = {Pairwise gene GO-based measures for biclustering of high-dimensional
               expression data},
  journal   = {BioData Min.},
  volume    = {11},
  number    = {1},
  pages     = {4:1--4:19},
  year      = {2018},
  url       = {https://doi.org/10.1186/s13040-018-0165-9},
  doi       = {10.1186/s13040-018-0165-9},
  timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/NepomucenoTNA18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Parraga-AlavaDI18,
  author    = {Jorge Parraga{-}Alava and
               M{\'{a}}rcio Dorn and
               Mario Inostroza{-}Ponta},
  title     = {A multi-objective gene clustering algorithm guided by apriori biological
               knowledge with intensification and diversification strategies},
  journal   = {BioData Min.},
  volume    = {11},
  number    = {1},
  pages     = {16:1--16:22},
  year      = {2018},
  url       = {https://doi.org/10.1186/s13040-018-0178-4},
  doi       = {10.1186/s13040-018-0178-4},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Parraga-AlavaDI18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/PietteM18,
  author    = {Elizabeth R. Piette and
               Jason H. Moore},
  title     = {Improving machine learning reproducibility in genetic association
               studies with proportional instance cross validation {(PICV)}},
  journal   = {BioData Min.},
  volume    = {11},
  number    = {1},
  pages     = {6:1--6:11},
  year      = {2018},
  url       = {https://doi.org/10.1186/s13040-018-0167-7},
  doi       = {10.1186/s13040-018-0167-7},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/PietteM18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/QinL18,
  author    = {Wenyi Qin and
               Hui Lu},
  title     = {A novel joint analysis framework improves identification of differentially
               expressed genes in cross disease transcriptomic analysis},
  journal   = {BioData Min.},
  volume    = {11},
  number    = {1},
  pages     = {3:1--3:17},
  year      = {2018},
  url       = {https://doi.org/10.1186/s13040-018-0163-y},
  doi       = {10.1186/s13040-018-0163-y},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/QinL18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/SipperFAM18,
  author    = {Moshe Sipper and
               Weixuan Fu and
               Karuna Ahuja and
               Jason H. Moore},
  title     = {Investigating the parameter space of evolutionary algorithms},
  journal   = {BioData Min.},
  volume    = {11},
  number    = {1},
  pages     = {2:1--2:14},
  year      = {2018},
  url       = {https://doi.org/10.1186/s13040-018-0164-x},
  doi       = {10.1186/s13040-018-0164-x},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/SipperFAM18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/SipperUM18,
  author    = {Moshe Sipper and
               Ryan J. Urbanowicz and
               Jason H. Moore},
  title     = {To know the objective is not (necessarily) to know the objective function},
  journal   = {BioData Min.},
  volume    = {11},
  number    = {1},
  pages     = {21:1--21:3},
  year      = {2018},
  url       = {https://doi.org/10.1186/s13040-018-0182-8},
  doi       = {10.1186/s13040-018-0182-8},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/SipperUM18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/TiptonCHGKSDDMG18,
  author    = {Laura Tipton and
               Karen T. Cuenco and
               Laurence Huang and
               Ruth M. Greenblatt and
               Eric Kleerup and
               Frank Sciurba and
               Steven R. Duncan and
               Michael P. Donahoe and
               Alison Morris and
               Elodie Ghedin},
  title     = {Measuring associations between the microbiota and repeated measures
               of continuous clinical variables using a lasso-penalized generalized
               linear mixed model},
  journal   = {BioData Min.},
  volume    = {11},
  number    = {1},
  pages     = {12:1--12:20},
  year      = {2018},
  url       = {https://doi.org/10.1186/s13040-018-0173-9},
  doi       = {10.1186/s13040-018-0173-9},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/TiptonCHGKSDDMG18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ToFR18,
  author    = {Kimberly To and
               Rebecca C. Fry and
               David M. Reif},
  title     = {Characterizing the effects of missing data and evaluating imputation
               methods for chemical prioritization applications using ToxPi},
  journal   = {BioData Min.},
  volume    = {11},
  number    = {1},
  pages     = {10:1--10:12},
  year      = {2018},
  url       = {https://doi.org/10.1186/s13040-018-0169-5},
  doi       = {10.1186/s13040-018-0169-5},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ToFR18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/VermaLZVDLLUMKR18,
  author    = {Shefali S. Verma and
               Anastasia Lucas and
               Xinyuan Zhang and
               Yogasudha Veturi and
               Scott M. Dudek and
               Binglan Li and
               Ruowang Li and
               Ryan J. Urbanowicz and
               Jason H. Moore and
               Dokyoon Kim and
               Marylyn D. Ritchie},
  title     = {Collective feature selection to identify crucial epistatic variants},
  journal   = {BioData Min.},
  volume    = {11},
  number    = {1},
  pages     = {5:1--5:22},
  year      = {2018},
  url       = {https://doi.org/10.1186/s13040-018-0168-6},
  doi       = {10.1186/s13040-018-0168-6},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/VermaLZVDLLUMKR18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/YangWLCC18,
  author    = {Cheng{-}Hong Yang and
               Kuo{-}Chuan Wu and
               Yu{-}Shiun Lin and
               Li{-}Yeh Chuang and
               Hsueh{-}Wei Chang},
  title     = {Protein folding prediction in the {HP} model using ions motion optimization
               with a greedy algorithm},
  journal   = {BioData Min.},
  volume    = {11},
  number    = {1},
  pages     = {17:1--17:14},
  year      = {2018},
  url       = {https://doi.org/10.1186/s13040-018-0176-6},
  doi       = {10.1186/s13040-018-0176-6},
  timestamp = {Thu, 15 Oct 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/YangWLCC18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ZhangWDX18,
  author    = {Jing Zhang and
               Dan Wu and
               Yiqin Dai and
               Jianjiang Xu},
  title     = {Functional relevance for central cornea thickness-associated genetic
               variants by using integrative analyses},
  journal   = {BioData Min.},
  volume    = {11},
  number    = {1},
  pages     = {19:1--19:13},
  year      = {2018},
  url       = {https://doi.org/10.1186/s13040-018-0179-3},
  doi       = {10.1186/s13040-018-0179-3},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ZhangWDX18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/AhmedSGMHL17,
  author    = {Musaddeque Ahmed and
               Richard C. Sallari and
               Haiyang Guo and
               Jason H. Moore and
               Housheng H. He and
               Mathieu Lupien},
  title     = {Variant Set Enrichment: an {R} package to identify disease-associated
               functional genomic regions},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {9:1--9:5},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0129-5},
  doi       = {10.1186/s13040-017-0129-5},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/AhmedSGMHL17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Al-HusainH17,
  author    = {Luluah Al{-}Husain and
               Alaaeldin M. Hafez},
  title     = {Cluster ensemble based on Random Forests for genetic data},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {37:1--37:25},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0156-2},
  doi       = {10.1186/s13040-017-0156-2},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Al-HusainH17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/BattogtokhMM17,
  author    = {Bilguunzaya Battogtokh and
               Majid Mojirsheibani and
               James Malley},
  title     = {The optimal crowd learning machine},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {16:1--16:12},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0135-7},
  doi       = {10.1186/s13040-017-0135-7},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/BattogtokhMM17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/BerghoffKKWG17,
  author    = {Bork A. Berghoff and
               Torgny Karlsson and
               Thomas K{\"{a}}llman and
               E. Gerhart H. Wagner and
               Manfred G. Grabherr},
  title     = {RNA-sequence data normalization through in silico prediction of reference
               genes: the bacterial response to {DNA} damage as case study},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {30:1--30:20},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0150-8},
  doi       = {10.1186/s13040-017-0150-8},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/BerghoffKKWG17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/BragaADNBT17,
  author    = {Lucas P. P. Braga and
               Rafael F. Alves and
               Marina T. F. Dellias and
               Acacio A. Navarrete and
               Thiago O. Basso and
               Siu M. Tsai},
  title     = {Vinasse fertirrigation alters soil resistome dynamics: an analysis
               based on metagenomic profiles},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {17:1--17:7},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0138-4},
  doi       = {10.1186/s13040-017-0138-4},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/BragaADNBT17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Chicco17,
  author    = {Davide Chicco},
  title     = {Ten quick tips for machine learning in computational biology},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {35:1--35:17},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0155-3},
  doi       = {10.1186/s13040-017-0155-3},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Chicco17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/CoparZZ17,
  author    = {Andrej Copar and
               Marinka Zitnik and
               Blaz Zupan},
  title     = {Scalable non-negative matrix tri-factorization},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {41:1--41:16},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0160-6},
  doi       = {10.1186/s13040-017-0160-6},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/CoparZZ17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/CrabtreeMBG17,
  author    = {Nathaniel Crabtree and
               Jason H. Moore and
               John F. Bowyer and
               Nysia I. George},
  title     = {Multi-class computational evolution: development, benchmark evaluation
               and application to RNA-Seq biomarker discovery},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {13:1--13:18},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0134-8},
  doi       = {10.1186/s13040-017-0134-8},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/CrabtreeMBG17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/DenaxasDGPCMHS17,
  author    = {Spiros C. Denaxas and
               Kenan Direk and
               Arturo Gonzalez{-}Izquierdo and
               Maria Pikoula and
               Sera Aylin Cakiroglu and
               Jason Moore and
               Harry Hemingway and
               Liam Smeeth},
  title     = {Methods for enhancing the reproducibility of biomedical research findings
               using electronic health records},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {31:1--31:19},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0151-7},
  doi       = {10.1186/s13040-017-0151-7},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/DenaxasDGPCMHS17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/DuCSLL17,
  author    = {Wei Du and
               Zhongbo Cao and
               Tianci Song and
               Ying Li and
               Yanchun Liang},
  title     = {A feature selection method based on multiple kernel learning with
               expression profiles of different types},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {4:1--4:16},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0124-x},
  doi       = {10.1186/s13040-017-0124-x},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/DuCSLL17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/FiannacaRPRU17,
  author    = {Antonino Fiannaca and
               Massimo La Rosa and
               Laura La Paglia and
               Riccardo Rizzo and
               Alfonso Urso},
  title     = {nRC: non-coding {RNA} Classifier based on structural features},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {27:1--27:18},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0148-2},
  doi       = {10.1186/s13040-017-0148-2},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/FiannacaRPRU17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Gonzalez-Valbuena17,
  author    = {Elpidio{-}Emmanuel Gonzalez{-}Valbuena and
               Victor Trevino},
  title     = {Metrics to estimate differential co-expression networks},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {32:1--32:15},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0152-6},
  doi       = {10.1186/s13040-017-0152-6},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Gonzalez-Valbuena17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/HolzingerVMHDGL17,
  author    = {Emily Rose Holzinger and
               Shefali S. Verma and
               Carrie Colleen Buchanan Moore and
               Molly A. Hall and
               Rishika De and
               Diane Gilbert{-}Diamond and
               Matthew B. Lanktree and
               Nathan Pankratz and
               Antoinette Amuzu and
               Amber Burt and
               Caroline Dale and
               Scott M. Dudek and
               Clement E. Furlong and
               Tom R. Gaunt and
               Daniel Seung Kim and
               Helene Riess and
               Suthesh Sivapalaratnam and
               Vinicius Tragante and
               Erik P. A. van Iperen and
               Ariel Brautbar and
               David S. Carrell and
               David R. Crosslin and
               Gail P. Jarvik and
               Helena Kuivaniemi and
               Iftikhar J. Kullo and
               Eric B. Larson and
               Laura J. Rasmussen{-}Torvik and
               Gerard Tromp and
               Jens Baumert and
               Karen J. Cruickshanks and
               Martin Farrall and
               Aroon D. Hingorani and
               G. K. Hovingh and
               Marcus E. Kleber and
               Barbara E. Klein and
               Ronald Klein and
               Wolfgang Koenig and
               Leslie A. Lange and
               Winfried M{\"{a}}rz and
               Kari E. North and
               N. Charlotte Onland{-}Moret and
               Alex P. Reiner and
               Philippa J. Talmud and
               Yvonne T. van der Schouw and
               James G. Wilson and
               Mika Kivim{\"{a}}ki and
               Meena Kumari and
               Jason H. Moore and
               Fotios Drenos and
               Folkert W. Asselbergs and
               Brendan J. Keating and
               Marylyn D. Ritchie},
  title     = {Discovery and replication of {SNP-SNP} interactions for quantitative
               lipid traits in over 60,000 individuals},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {25:1--25:20},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0145-5},
  doi       = {10.1186/s13040-017-0145-5},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/HolzingerVMHDGL17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/KimJLK17,
  author    = {Sunghwan Kim and
               Jae{-}Hwan Jhong and
               Jung{-}Jun Lee and
               Ja{-}Yong Koo},
  title     = {Meta-analytic support vector machine for integrating multiple omics
               data},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {2:1--2:14},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0126-8},
  doi       = {10.1186/s13040-017-0126-8},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/KimJLK17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/KimJLK17a,
  author    = {Sunghwan Kim and
               Jae{-}Hwan Jhong and
               Jung{-}Jun Lee and
               Ja{-}Yong Koo},
  title     = {Erratum to: Meta-analytic support vector machine for integrating multiple
               omics data},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {8:1--8:2},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0128-6},
  doi       = {10.1186/s13040-017-0128-6},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/KimJLK17a.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/KordmahallehSHH17,
  author    = {Mina Moradi Kordmahalleh and
               Mohammad Gorji Sefidmazgi and
               Scott H. Harrison and
               Abdollah Homaifar},
  title     = {Identifying time-delayed gene regulatory networks via an evolvable
               hierarchical recurrent neural network},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {29:1--29:25},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0146-4},
  doi       = {10.1186/s13040-017-0146-4},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/KordmahallehSHH17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LangdonL17,
  author    = {William B. Langdon and
               Brian Yee Hong Lam},
  title     = {Genetically improved BarraCUDA},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {28:1--28:11},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0149-1},
  doi       = {10.1186/s13040-017-0149-1},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LangdonL17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LeeS17,
  author    = {Hyeonjeong Lee and
               Miyoung Shin},
  title     = {Mining pathway associations for disease-related pathway activity analysis
               based on gene expression and methylation data},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {3:1--3:13},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0127-7},
  doi       = {10.1186/s13040-017-0127-7},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LeeS17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LiangK17,
  author    = {Yulan Liang and
               Arpad Kelemen},
  title     = {Computational dynamic approaches for temporal omics data with applications
               to systems medicine},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {20:1--20:20},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0140-x},
  doi       = {10.1186/s13040-017-0140-x},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LiangK17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LiuSM17,
  author    = {Zhenqiu Liu and
               Fengzhu Sun and
               Dermot P. B. McGovern},
  title     = {Sparse generalized linear model with {L} 0 approximation for feature
               selection and prediction with big omics data},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {39:1--39:12},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0159-z},
  doi       = {10.1186/s13040-017-0159-z},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LiuSM17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LokhovMKBA17,
  author    = {Petr G. Lokhov and
               Dmitri L. Maslov and
               Oleg N. Kharibin and
               Elena Balashova and
               Alexander I. Archakov},
  title     = {Label-free data standardization for clinical metabolomics},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {10:1--10:12},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0132-x},
  doi       = {10.1186/s13040-017-0132-x},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LokhovMKBA17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LysenkoBT17,
  author    = {Artem Lysenko and
               Keith A. Boroevich and
               Tatsuhiko Tsunoda},
  title     = {Arete - candidate gene prioritization using biological network topology
               with additional evidence types},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {22:1--22:12},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0141-9},
  doi       = {10.1186/s13040-017-0141-9},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LysenkoBT17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Mohammadhassanzadeh17,
  author    = {Hossein Mohammadhassanzadeh and
               William Van Woensel and
               Samina Raza Abidi and
               Syed Sibte Raza Abidi},
  title     = {Semantics-based plausible reasoning to extend the knowledge coverage
               of medical knowledge bases for improved clinical decision support},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {7:1--7:31},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0123-y},
  doi       = {10.1186/s13040-017-0123-y},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Mohammadhassanzadeh17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MonroeATMLMWM17,
  author    = {J. Grey Monroe and
               Zachariah A. Allen and
               Paul Tanger and
               Jack L. Mullen and
               John T. Lovell and
               Brook T. Moyers and
               L. Darrell Whitley and
               John K. McKay},
  title     = {TSPmap, a tool making use of traveling salesperson problem solvers
               in the efficient and accurate construction of high-density genetic
               linkage maps},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {38:1--38:15},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0158-0},
  doi       = {10.1186/s13040-017-0158-0},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MonroeATMLMWM17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MooreAOCLBOGA17,
  author    = {Jason H. Moore and
               Peter C. Andrews and
               Randal S. Olson and
               Sarah E. Carlson and
               Curt Larock and
               Mario J. Bulhoes and
               James P. O'Connor and
               Ellen M. Greytak and
               Steven Armentrout},
  title     = {Grid-based stochastic search for hierarchical gene-gene interactions
               in population-based genetic studies of common human diseases},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {19:1--19:16},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0139-3},
  doi       = {10.1186/s13040-017-0139-3},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MooreAOCLBOGA17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/NeumannGH17,
  author    = {Ursula Neumann and
               Nikita Genze and
               Dominik Heider},
  title     = {{EFS:} an ensemble feature selection tool implemented as R-package
               and web-application},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {21:1--21:9},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0142-8},
  doi       = {10.1186/s13040-017-0142-8},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/NeumannGH17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/OlsonCOUM17,
  author    = {Randal S. Olson and
               William G. La Cava and
               Patryk Orzechowski and
               Ryan J. Urbanowicz and
               Jason H. Moore},
  title     = {{PMLB:} a large benchmark suite for machine learning evaluation and
               comparison},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {36:1--36:13},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0154-4},
  doi       = {10.1186/s13040-017-0154-4},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/OlsonCOUM17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/PerdigaoRO17,
  author    = {Nelson Perdigao and
               Agostinho C. Rosa and
               Se{\'{a}}n I. O'Donoghue},
  title     = {The Dark Proteome Database},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {24:1--24:11},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0144-6},
  doi       = {10.1186/s13040-017-0144-6},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/PerdigaoRO17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/PhamHBBM17,
  author    = {Ngoc Cam Pham and
               Benjamin Haibe{-}Kains and
               Pau Bellot and
               Gianluca Bontempi and
               Patrick E. Meyer},
  title     = {Study of Meta-analysis strategies for network inference using information-theoretic
               approaches},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {15:1--15:14},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0136-6},
  doi       = {10.1186/s13040-017-0136-6},
  timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/PhamHBBM17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/RayBD17,
  author    = {Indrani Ray and
               Anindya Bhattacharya and
               Rajat K. De},
  title     = {{OCDD:} an obesity and co-morbid disease database},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {33:1--33:11},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0153-5},
  doi       = {10.1186/s13040-017-0153-5},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/RayBD17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/RenHLWM17,
  author    = {Xing Ren and
               Qiang Hu and
               Song Liu and
               Jianmin Wang and
               Jeffrey C. Miecznikowski},
  title     = {Gene set analysis controlling for length bias in RNA-seq experiments},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {5:1--5:18},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0125-9},
  doi       = {10.1186/s13040-017-0125-9},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/RenHLWM17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/RodriguezG17,
  author    = {Nestor Rodriguez and
               Sergio Rojas Galeano},
  title     = {Discovering feature relevancy and dependency by kernel-guided probabilistic
               model-building evolution},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {12:1--12:19},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0131-y},
  doi       = {10.1186/s13040-017-0131-y},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/RodriguezG17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/SigdelDSDPA17,
  author    = {Madhav Sigdel and
               Imren Din{\c{c}} and
               Madhu S. Sigdel and
               Semih Din{\c{c}} and
               Marc L. Pusey and
               Ramazan Savas Ayg{\"{u}}n},
  title     = {Feature analysis for classification of trace fluorescent labeled protein
               crystallization images},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {14:1--14:35},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0133-9},
  doi       = {10.1186/s13040-017-0133-9},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/SigdelDSDPA17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/SipperM17,
  author    = {Moshe Sipper and
               Jason H. Moore},
  title     = {Artificial intelligence: more human with human},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {34:1--34:2},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0157-1},
  doi       = {10.1186/s13040-017-0157-1},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/SipperM17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/SipperOM17,
  author    = {Moshe Sipper and
               Randal S. Olson and
               Jason H. Moore},
  title     = {Evolutionary computation: the next major transition of artificial
               intelligence?},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {26:1--26:3},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0147-3},
  doi       = {10.1186/s13040-017-0147-3},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/SipperOM17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/SunSLLZ17,
  author    = {Yingxia Sun and
               Junliang Shang and
               Jin{-}Xing Liu and
               Shengjun Li and
               Chun{-}Hou Zheng},
  title     = {epiACO - a method for identifying epistasis based on ant Colony optimization
               algorithm},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {23:1--23:17},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0143-7},
  doi       = {10.1186/s13040-017-0143-7},
  timestamp = {Sat, 13 Jun 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/SunSLLZ17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/TraganteGFVSVPH17,
  author    = {Vinicius Tragante and
               Johannes M. I. H. Gho and
               Janine F. Felix and
               Ramachandran S. Vasan and
               Nicholas L. Smith and
               Benjamin F. Voight and
               Colin Palmer and
               Pim van der Harst and
               Jason H. Moore and
               Folkert W. Asselbergs},
  title     = {Gene Set Enrichment Analyses: lessons learned from the heart failure
               phenotype},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {18:1--18:11},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0137-5},
  doi       = {10.1186/s13040-017-0137-5},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/TraganteGFVSVPH17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Tsur17,
  author    = {Elishai Ezra Tsur},
  title     = {Rapid development of entity-based data models for bioinformatics with
               persistence object-oriented design and structured interfaces},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {11:1--11:12},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0130-z},
  doi       = {10.1186/s13040-017-0130-z},
  timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Tsur17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/WuWCL17,
  author    = {Wei Wu and
               Zhiheng Wang and
               Peisheng Cong and
               Tonghua Li},
  title     = {Accurate prediction of protein relative solvent accessibility using
               a balanced model},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {1:1--1:14},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-016-0121-5},
  doi       = {10.1186/s13040-016-0121-5},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/WuWCL17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/XieCDLSZYH17,
  author    = {Qiwei Xie and
               Xi Chen and
               Hao Deng and
               Danqian Liu and
               Yingyu Sun and
               Xiaojuan Zhou and
               Yang Yang and
               Hua Han},
  title     = {An automated pipeline for bouton, spine, and synapse detection of
               in vivo two-photon images},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {40:1--40:23},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-017-0161-5},
  doi       = {10.1186/s13040-017-0161-5},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/XieCDLSZYH17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ZhangLZZHZCC17,
  author    = {Fan Zhang and
               Jie{-}Diao Lin and
               Xiao{-}Yu Zuo and
               Yi{-}Xuan Zhuang and
               Chao{-}Qun Hong and
               Guo{-}Jun Zhang and
               Xiao{-}Jiang Cui and
               Yu{-}Kun Cui},
  title     = {Elevated transcriptional levels of aldolase {A} {(ALDOA)} associates
               with cell cycle-related genes in patients with {NSCLC} and several
               solid tumors},
  journal   = {BioData Min.},
  volume    = {10},
  number    = {1},
  pages     = {6:1--6:20},
  year      = {2017},
  url       = {https://doi.org/10.1186/s13040-016-0122-4},
  doi       = {10.1186/s13040-016-0122-4},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ZhangLZZHZCC17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ChangCC16,
  author    = {Jennifer Chang and
               Hyejin Cho and
               Hui{-}Hsien Chou},
  title     = {Mango: combining and analyzing heterogeneous biological networks},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {25},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0105-5},
  doi       = {10.1186/s13040-016-0105-5},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ChangCC16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ChengAAM16,
  author    = {Samantha Cheng and
               Angeline S. Andrew and
               Peter C. Andrews and
               Jason H. Moore},
  title     = {Complex systems analysis of bladder cancer susceptibility reveals
               a role for decarboxylase activity in two genome-wide association studies},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {40:1--40:6},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0119-z},
  doi       = {10.1186/s13040-016-0119-z},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ChengAAM16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/DenaxasAM16,
  author    = {Spiros C. Denaxas and
               Folkert W. Asselbergs and
               Jason H. Moore},
  title     = {The tip of the iceberg: challenges of accessing hospital electronic
               health record data for biological data mining},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {29},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0109-1},
  doi       = {10.1186/s13040-016-0109-1},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/DenaxasAM16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/DhifliD16,
  author    = {Wajdi Dhifli and
               Abdoulaye Banir{\'{e}} Diallo},
  title     = {ProtNN: fast and accurate protein 3D-structure classification in structural
               and topological space},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {30},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0108-2},
  doi       = {10.1186/s13040-016-0108-2},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/DhifliD16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/FinkelmanFK16,
  author    = {Brian S. Finkelman and
               Benjamin French and
               Stephen E. Kimmel},
  title     = {The prediction accuracy of dynamic mixed-effects models in clustered
               data},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {5},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0084-6},
  doi       = {10.1186/s13040-016-0084-6},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/FinkelmanFK16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/FisconWCPGBCCPB16,
  author    = {Giulia Fiscon and
               Emanuel Weitschek and
               Eleonora Cella and
               Alessandra Lo Presti and
               Marta Giovanetti and
               Muhammed Babakir{-}Mina and
               Marco Ciotti and
               Massimo Ciccozzi and
               Alessandra Pierangeli and
               Paola Bertolazzi and
               Giovanni Felici},
  title     = {{MISSEL:} a method to identify a large number of small species-specific
               genomic subsequences and its application to viruses classification},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {38:1--38:24},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0116-2},
  doi       = {10.1186/s13040-016-0116-2},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/FisconWCPGBCCPB16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ForeroM16,
  author    = {Diego A. Forero and
               Jason H. Moore},
  title     = {Considerations for higher efficiency and productivity in research
               activities},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {35:1--35:4},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0115-3},
  doi       = {10.1186/s13040-016-0115-3},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ForeroM16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/HeinkeBKL16,
  author    = {Florian Heinke and
               Sebastian Bittrich and
               Florian Kaiser and
               Dirk Labudde},
  title     = {SequenceCEROSENE: a computational method and web server to visualize
               spatial residue neighborhoods at the sequence level},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {6},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0083-7},
  doi       = {10.1186/s13040-016-0083-7},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/HeinkeBKL16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/HimmelsteinGM16,
  author    = {Daniel S. Himmelstein and
               Casey S. Greene and
               Jason H. Moore},
  title     = {Erratum to: Evolving hard problems: generating human genetics datasets
               with a complex etiology},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {9},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0085-5},
  doi       = {10.1186/s13040-016-0085-5},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/HimmelsteinGM16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/HongPCJ16,
  author    = {Na Hong and
               Jyotishman Pathak and
               Christopher G. Chute and
               Guoqian Jiang},
  title     = {Developing a modular architecture for creation of rule-based clinical
               diagnostic criteria},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {33},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0113-5},
  doi       = {10.1186/s13040-016-0113-5},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/HongPCJ16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/HuangGZHKMMW16,
  author    = {Minjun Huang and
               Britney E. Graham and
               Ge Zhang and
               Reed Harder and
               Nuri Kodaman and
               Jason H. Moore and
               Louis J. Muglia and
               Scott M. Williams},
  title     = {Evolutionary triangulation: informing genetic association studies
               with evolutionary evidence},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {12},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0091-7},
  doi       = {10.1186/s13040-016-0091-7},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/HuangGZHKMMW16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/IcayCCRLH16,
  author    = {Katherine Icay and
               Ping Chen and
               Alejandra Cervera and
               Ville Rantanen and
               Rainer Lehtonen and
               Sampsa Hautaniemi},
  title     = {SePIA: {RNA} and small {RNA} sequence processing, integration, and
               analysis},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {20},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0099-z},
  doi       = {10.1186/s13040-016-0099-z},
  timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/IcayCCRLH16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/KarbhalSK16,
  author    = {Rajiv Karbhal and
               Sangeeta Sawant and
               Urmila Kulkarni{-}Kale},
  title     = {Erratum to: BioDB extractor: customized data extraction system for
               commonly used bioinformatics databases},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {8},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0081-9},
  doi       = {10.1186/s13040-016-0081-9},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/KarbhalSK16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LazzariniWWHKB16,
  author    = {Nicola Lazzarini and
               Pawel Widera and
               Stuart Williamson and
               Rakesh Heer and
               Natalio Krasnogor and
               Jaume Bacardit},
  title     = {Functional networks inference from rule-based machine learning models},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {28},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0106-4},
  doi       = {10.1186/s13040-016-0106-4},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LazzariniWWHKB16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LeeYKAYCKK16,
  author    = {Jun Hwa Lee and
               Byong Chul Yoo and
               Yun Hwan Kim and
               Sun{-}A. Ahn and
               Seung{-}Gu Yeo and
               Jae Youl Cho and
               Kyung{-}Hee Kim and
               Seung Cheol Kim},
  title     = {Low-mass-ion discriminant equation {(LOME)} for ovarian cancer screening},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {32},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0111-7},
  doi       = {10.1186/s13040-016-0111-7},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LeeYKAYCKK16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LiDKHBPBLMBR16,
  author    = {Ruowang Li and
               Scott M. Dudek and
               Dokyoon Kim and
               Molly A. Hall and
               Yukiko Bradford and
               Peggy L. Peissig and
               Murray H. Brilliant and
               James G. Linneman and
               Catherine A. McCarty and
               Le Bao and
               Marylyn D. Ritchie},
  title     = {Identification of genetic interaction networks via an evolutionary
               algorithm evolved Bayesian network},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {18},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0094-4},
  doi       = {10.1186/s13040-016-0094-4},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LiDKHBPBLMBR16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LiFSCWW16,
  author    = {Jinyan Li and
               Simon Fong and
               Yunsick Sung and
               Kyungeun Cho and
               Raymond K. Wong and
               Kelvin Kian Loong Wong},
  title     = {Adaptive swarm cluster-based dynamic multi-objective synthetic minority
               oversampling technique algorithm for tackling binary imbalanced datasets
               in biomedical data classification},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {37:1--37:15},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0117-1},
  doi       = {10.1186/s13040-016-0117-1},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LiFSCWW16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LiMAKM16,
  author    = {Jing Li and
               James D. Malley and
               Angeline S. Andrew and
               Margaret R. Karagas and
               Jason H. Moore},
  title     = {Detecting gene-gene interactions using a permutation-based random
               forest method},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {14},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0093-5},
  doi       = {10.1186/s13040-016-0093-5},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LiMAKM16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LiangRZKGSSCSJS16,
  author    = {Ma Liang and
               Castle Raley and
               Xin Zheng and
               Geetha Kutty and
               Emile Gogineni and
               Brad T. Sherman and
               Qiang Sun and
               Xiongfong Chen and
               Thomas Skelly and
               Kristine Jones and
               Robert M. Stephens and
               Bin Zhou and
               William W. Lau and
               Calvin A. Johnson and
               Tomozumi Imamichi and
               Minkang Jiang},
  title     = {Distinguishing highly similar gene isoforms with a clustering-based
               bioinformatics analysis of PacBio single-molecule long reads},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {13},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0090-8},
  doi       = {10.1186/s13040-016-0090-8},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LiangRZKGSSCSJS16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LouhimoLBKLH16,
  author    = {Riku Louhimo and
               Marko Laakso and
               Denis Belitskin and
               Juha Klefstr{\"{o}}m and
               Rainer Lehtonen and
               Sampsa Hautaniemi},
  title     = {Data integration to prioritize drugs using genomics and curated data},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {21},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0097-1},
  doi       = {10.1186/s13040-016-0097-1},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LouhimoLBKLH16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LynchM16,
  author    = {Shannon M. Lynch and
               Jason H. Moore},
  title     = {A call for biological data mining approaches in epidemiology},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {1},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-015-0079-8},
  doi       = {10.1186/s13040-015-0079-8},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LynchM16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LysenkoRSMRA16,
  author    = {Artem Lysenko and
               Irina A. Roznovat and
               Mansoor Saqi and
               Alexander Mazein and
               Christopher J. Rawlings and
               Charles Auffray},
  title     = {Representing and querying disease networks using graph databases},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {23},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0102-8},
  doi       = {10.1186/s13040-016-0102-8},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LysenkoRSMRA16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MeherSR16,
  author    = {Prabina Kumar Meher and
               Tanmaya Kumar Sahu and
               Atmakuri Rao},
  title     = {Prediction of donor splice sites using random forest with a new sequence
               encoding approach},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {4},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0086-4},
  doi       = {10.1186/s13040-016-0086-4},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MeherSR16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MilicchioRBMP16,
  author    = {Franco Milicchio and
               Rebecca Rose and
               Jiang Bian and
               Jae Min and
               Mattia C. F. Prosperi},
  title     = {Visual programming for next-generation sequencing data analytics},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {16},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0095-3},
  doi       = {10.1186/s13040-016-0095-3},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MilicchioRBMP16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MilioliVTRBM16,
  author    = {Heloisa H. Milioli and
               Renato Vimieiro and
               Inna Tishchenko and
               Carlos Riveros and
               Regina Berretta and
               Pablo Moscato},
  title     = {Iteratively refining breast cancer intrinsic subtypes in the {METABRIC}
               dataset},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {2},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-015-0078-9},
  doi       = {10.1186/s13040-015-0078-9},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MilioliVTRBM16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MooreBWFR16,
  author    = {Carrie Colleen Buchanan Moore and
               Anna Okula Basile and
               John R. Wallace and
               Alex Thomas Frase and
               Marylyn DeRiggi Ritchie},
  title     = {A biologically informed method for detecting rare variant associations},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {27},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0107-3},
  doi       = {10.1186/s13040-016-0107-3},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MooreBWFR16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MooreH16,
  author    = {Jason H. Moore and
               John H. Holmes},
  title     = {The golden era of biomedical informatics has begun},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {15},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0092-6},
  doi       = {10.1186/s13040-016-0092-6},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MooreH16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MoreMP16,
  author    = {Ravi Prabhakar More and
               Rupali Chandrashekhar Mane and
               Hemant J. Purohit},
  title     = {matK-QR classifier: a patterns based approach for plant species identification},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {39:1--39:15},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0120-6},
  doi       = {10.1186/s13040-016-0120-6},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MoreMP16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Munoz-TorresRBG16,
  author    = {Pau M. Mu{\~{n}}oz{-}Torres and
               Filip Rokc and
               Robert Beluzic and
               Ivana Grbesa and
               Oliver Vugrek},
  title     = {msBiodat analysis tool, big data analysis for high-throughput experiments},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {26},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0104-6},
  doi       = {10.1186/s13040-016-0104-6},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Munoz-TorresRBG16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/NeumannRSBKCH16,
  author    = {Ursula Neumann and
               Mona Riemenschneider and
               Jan{-}Peter Sowa and
               Theodor Baars and
               Julia K{\"{a}}lsch and
               Ali Canbay and
               Dominik Heider},
  title     = {Compensation of feature selection biases accompanied with improved
               predictive performance for binary classification by using a novel
               ensemble feature selection approach},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {36:1--36:14},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0114-4},
  doi       = {10.1186/s13040-016-0114-4},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/NeumannRSBKCH16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/OkimotoZWLNFTHC16,
  author    = {Gordon Okimoto and
               Ashkan Zeinalzadeh and
               Tom Wenska and
               Michael Loomis and
               James B. Nation and
               Tiphaine Fabre and
               Maarit Tiirikainen and
               Brenda Hernandez and
               Owen Chan and
               Linda Wong and
               Sandi Kwee},
  title     = {Joint analysis of multiple high-dimensional data types using sparse
               matrix approximations of rank-1 with applications to ovarian and liver
               cancer},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {24},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0103-7},
  doi       = {10.1186/s13040-016-0103-7},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/OkimotoZWLNFTHC16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/OzgurHH16,
  author    = {Arzucan {\"{O}}zg{\"{u}}r and
               Junguk Hur and
               Yongqun He},
  title     = {The Interaction Network Ontology-supported modeling and mining of
               complex interactions represented with multiple keywords in biomedical
               literature},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {41:1--41:17},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0118-0},
  doi       = {10.1186/s13040-016-0118-0},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/OzgurHH16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/RazaLSENR16,
  author    = {Shan{-}e{-}Ahmed Raza and
               Daniel Langenk{\"{a}}mper and
               Korsuk Sirinukunwattana and
               David B. A. Epstein and
               Tim W. Nattkemper and
               Nasir M. Rajpoot},
  title     = {Robust normalization protocols for multiplexed fluorescence bioimage
               analysis},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {11},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0088-2},
  doi       = {10.1186/s13040-016-0088-2},
  timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/RazaLSENR16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Riemenschneider16,
  author    = {Mona Riemenschneider and
               Robin Senge and
               Ursula Neumann and
               Eyke H{\"{u}}llermeier and
               Dominik Heider},
  title     = {Exploiting {HIV-1} protease and reverse transcriptase cross-resistance
               information for improved drug resistance prediction by means of multi-label
               classification},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {10},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0089-1},
  doi       = {10.1186/s13040-016-0089-1},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Riemenschneider16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/SolimanNC16,
  author    = {Maha Soliman and
               Olfa Nasraoui and
               Nigel G. F. Cooper},
  title     = {Building a glaucoma interaction network using a text mining approach},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {17},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0096-2},
  doi       = {10.1186/s13040-016-0096-2},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/SolimanNC16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/SongYKRWSSG16,
  author    = {Ailin Song and
               Jingwen Yan and
               Sungeun Kim and
               Shannon L. Risacher and
               Aaron K. Wong and
               Andrew J. Saykin and
               Li Shen and
               Casey S. Greene},
  title     = {Network-based analysis of genetic variants associated with hippocampal
               volume in Alzheimer's disease: a study of {ADNI} cohorts},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {3},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0082-8},
  doi       = {10.1186/s13040-016-0082-8},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/SongYKRWSSG16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/SzymczakHDMMMBS16,
  author    = {Silke Szymczak and
               Emily Rose Holzinger and
               Abhijit Dasgupta and
               James D. Malley and
               Anne M. Molloy and
               James L. Mills and
               Lawrence C. Brody and
               Dwight Stambolian and
               Joan E. Bailey{-}Wilson},
  title     = {r2VIM: {A} new variable selection method for random forests in genome-wide
               association studies},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {7},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0087-3},
  doi       = {10.1186/s13040-016-0087-3},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/SzymczakHDMMMBS16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Taguchi16,
  author    = {Y{-}h. Taguchi},
  title     = {Principal component analysis based unsupervised feature extraction
               applied to budding yeast temporally periodic gene expression},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {22},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0101-9},
  doi       = {10.1186/s13040-016-0101-9},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Taguchi16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/XingZC16,
  author    = {Guangming Xing and
               Guo{-}Qiang Zhang and
               Licong Cui},
  title     = {{FEDRR:} fast, exhaustive detection of redundant hierarchical relations
               for quality improvement of large biomedical ontologies},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {31},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0110-8},
  doi       = {10.1186/s13040-016-0110-8},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/XingZC16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ZhangWDAGZHJ16,
  author    = {Yile Zhang and
               Yau Shu Wong and
               Jian Deng and
               Cristina Anton and
               Stephan Gabos and
               Weiping Zhang and
               Dorothy Yu Huang and
               Can Jin},
  title     = {Machine learning algorithms for mode-of-action classification in toxicity
               assessment},
  journal   = {BioData Min.},
  volume    = {9},
  pages     = {19},
  year      = {2016},
  url       = {https://doi.org/10.1186/s13040-016-0098-0},
  doi       = {10.1186/s13040-016-0098-0},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ZhangWDAGZHJ16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/AlexeevBKMTG15,
  author    = {Dmitry G. Alexeev and
               Tanya Bibikova and
               Boris Kovarsky and
               Damir Melnikov and
               Alexander V. Tyakht and
               Vadim Govorun},
  title     = {Bacterial rose garden for metagenomic SNP-based phylogeny visualization},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {10},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0045-5},
  doi       = {10.1186/s13040-015-0045-5},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/AlexeevBKMTG15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/BeamMD15,
  author    = {Andrew L. Beam and
               Alison A. Motsinger{-}Reif and
               Jon Doyle},
  title     = {An investigation of gene-gene interactions in dose-response studies
               with Bayesian nonparametrics},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {6},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0039-3},
  doi       = {10.1186/s13040-015-0039-3},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/BeamMD15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/BeckF15,
  author    = {Daniel Beck and
               James A. Foster},
  title     = {Machine learning classifiers provide insight into the relationship
               between microbial communities and bacterial vaginosis},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {23},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0055-3},
  doi       = {10.1186/s13040-015-0055-3},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/BeckF15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/BosseHHNDLTM15,
  author    = {Magnus Bosse and
               Alexander Heuwieser and
               Andreas Heinzel and
               Ivan Nancucheo and
               Hivana Melo Barbosa Dall'Agnol and
               Arno Lukas and
               George Tzotzos and
               Bernd Mayer},
  title     = {Interaction networks for identifying coupled molecular processes in
               microbial communities},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {21},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0054-4},
  doi       = {10.1186/s13040-015-0054-4},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/BosseHHNDLTM15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ChingMWG15,
  author    = {Travers Ching and
               Jayson Masaki and
               Jason Weirather and
               Lana X. Garmire},
  title     = {Non-coding yet non-trivial: a review on the computational genomics
               of lincRNAs},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {44},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0075-z},
  doi       = {10.1186/s13040-015-0075-z},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ChingMWG15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/CieslikB15,
  author    = {Marcin Cieslik and
               Stefan Bekiranov},
  title     = {Genome-wide predictors of NF-{\(\kappa\)}B recruitment and transcriptional
               activity},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {37},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0071-3},
  doi       = {10.1186/s13040-015-0071-3},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/CieslikB15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/DeHMG15,
  author    = {Rishika De and
               Ting Hu and
               Jason H. Moore and
               Diane Gilbert{-}Diamond},
  title     = {Characterizing gene-gene interactions in a statistical epistasis network
               of twelve candidate genes for obesity},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {45},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0077-x},
  doi       = {10.1186/s13040-015-0077-x},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/DeHMG15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/DeVDHHHCCHJLPRM15,
  author    = {Rishika De and
               Shefali S. Verma and
               Fotios Drenos and
               Emily Rose Holzinger and
               Michael Holmes and
               Molly A. Hall and
               David R. Crosslin and
               David Carrell and
               Hakon Hakonarson and
               Gail P. Jarvik and
               Eric B. Larson and
               Jennifer A. Pacheco and
               Laura Rasmussen{-}Torvik and
               Carrie Moore and
               Folkert W. Asselbergs and
               Jason H. Moore and
               Marylyn D. Ritchie and
               Brendan Keating and
               Diane Gilbert{-}Diamond},
  title     = {Identifying gene-gene interactions that are highly associated with
               Body Mass Index using Quantitative Multifactor Dimensionality Reduction
               {(QMDR)}},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {41},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0074-0},
  doi       = {10.1186/s13040-015-0074-0},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/DeVDHHHCCHJLPRM15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Demidenko15,
  author    = {Eugene Demidenko},
  title     = {Microarray enriched gene rank},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {2},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-014-0033-1},
  doi       = {10.1186/s13040-014-0033-1},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Demidenko15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/DumitrescuGBFBC15,
  author    = {Logan Dumitrescu and
               Robert J. Goodloe and
               Yukiko Bradford and
               Eric Farber{-}Eger and
               Jonathan Boston and
               Dana C. Crawford},
  title     = {The effects of electronic medical record phenotyping details on genetic
               association studies: {HDL-C} as a case study},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {15},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0048-2},
  doi       = {10.1186/s13040-015-0048-2},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/DumitrescuGBFBC15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/DumitrescuRGBFP15,
  author    = {Logan Dumitrescu and
               Nicole A. Restrepo and
               Robert J. Goodloe and
               Jonathan Boston and
               Eric Farber{-}Eger and
               Sarah A. Pendergrass and
               William S. Bush and
               Dana C. Crawford},
  title     = {Towards a phenome-wide catalog of human clinical traits impacted by
               genetic ancestry},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {35},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0068-y},
  doi       = {10.1186/s13040-015-0068-y},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/DumitrescuRGBFP15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/FrostLM15,
  author    = {H. Robert Frost and
               Zhigang Li and
               Jason H. Moore},
  title     = {Principal component gene set enrichment {(PCGSE)}},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {25},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0059-z},
  doi       = {10.1186/s13040-015-0059-z},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/FrostLM15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Gardner-LubbeD15,
  author    = {Sugnet Gardner{-}Lubbe and
               Felix S. Dube},
  title     = {Visualisation of quadratic discriminant analysis and its application
               in exploration of microbial interactions},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {8},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0041-9},
  doi       = {10.1186/s13040-015-0041-9},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Gardner-LubbeD15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Gomez-RuedaMMPT15,
  author    = {Hugo G{\'{o}}mez{-}Rueda and
               Emmanuel Mart{\'{\i}}nez{-}Ledesma and
               Antonio Mart{\'{\i}}nez{-}Torteya and
               Rebeca Palacios{-}Corona and
               Victor Trevino},
  title     = {Integration and comparison of different genomic data for outcome prediction
               in cancer},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {32},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0065-1},
  doi       = {10.1186/s13040-015-0065-1},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Gomez-RuedaMMPT15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/GuiGSTMK15,
  author    = {Jiang Gui and
               Casey S. Greene and
               Con Sullivan and
               Walter Taylor and
               Jason H. Moore and
               Carol Kim},
  title     = {Testing multiple hypotheses through {IMP} weighted {FDR} based on
               a genetic functional network with application to a new zebrafish transcriptome
               study},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {17},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0050-8},
  doi       = {10.1186/s13040-015-0050-8},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/GuiGSTMK15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/HaiderLPLDKLG15,
  author    = {Syed Haider and
               Zoltan Lipinszki and
               Marcin Przewloka and
               Yaseen Ladak and
               Pier D'Avino and
               Yuu Kimata and
               Pietro Li{\`{o}} and
               David Glover},
  title     = {{DAPPER:} a data-mining resource for protein-protein interactions},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {30},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0063-3},
  doi       = {10.1186/s13040-015-0063-3},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/HaiderLPLDKLG15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/HuAKM15,
  author    = {Ting Hu and
               Angeline S. Andrew and
               Margaret R. Karagas and
               Jason H. Moore},
  title     = {Functional dyadicity and heterophilicity of gene-gene interactions
               in statistical epistasis networks},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {43},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0062-4},
  doi       = {10.1186/s13040-015-0062-4},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/HuAKM15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/HuangJBBCCCGHJL15,
  author    = {Xiuzhen Huang and
               Steven F. Jennings and
               Barry Bruce and
               Alison Buchan and
               Liming Cai and
               Pengyin Chen and
               Carole L. Cramer and
               Weihua Guan and
               Uwe Hilgert and
               Hongmei Jiang and
               Zenglu Li and
               Gail McClure and
               Donald F. McMullen and
               Bindu Nanduri and
               Andy D. Perkins and
               Bhanu Rekepalli and
               Saeed Salem and
               Jennifer Specker and
               Karl Walker and
               Donald C. Wunsch and
               Donghai Xiong and
               Shuzhong Zhang and
               Yu Zhang and
               Zhongming Zhao and
               Jason H. Moore},
  title     = {Big data - a 21st century science Maginot Line? No-boundary thinking:
               shifting from the big data paradigm},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {7},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0037-5},
  doi       = {10.1186/s13040-015-0037-5},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/HuangJBBCCCGHJL15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/JiangLSC15,
  author    = {Guoqian Jiang and
               Hongfang Liu and
               Harold R. Solbrig and
               Christopher G. Chute},
  title     = {Mining severe drug-drug interaction adverse events using Semantic
               Web technologies: a case study},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {12},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0044-6},
  doi       = {10.1186/s13040-015-0044-6},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/JiangLSC15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/KarbhalSK15,
  author    = {Rajiv Karbhal and
               Sangeeta Sawant and
               Urmila Kulkarni{-}Kale},
  title     = {BioDB extractor: customized data extraction system for commonly used
               bioinformatics databases},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {31},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0067-z},
  doi       = {10.1186/s13040-015-0067-z},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/KarbhalSK15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Langdon15,
  author    = {William B. Langdon},
  title     = {Performance of genetic programming optimised Bowtie2 on genome comparison
               and analytic testing {(GCAT)} benchmarks},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {1},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-014-0034-0},
  doi       = {10.1186/s13040-014-0034-0},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Langdon15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LareauWOM15,
  author    = {Caleb A. Lareau and
               Bill C. White and
               Ann L. Oberg and
               Brett A. McKinney},
  title     = {Differential co-expression network centrality and machine learning
               feature selection for identifying susceptibility hubs in networks
               with scale-free structure},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {5},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0040-x},
  doi       = {10.1186/s13040-015-0040-x},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LareauWOM15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LekmanKGHK15,
  author    = {Magnus Lekman and
               Robert Karlsson and
               Lisette Graae and
               Ola H{\"{o}}ssjer and
               Ingrid Kockum},
  title     = {A significant risk locus on 19q13 for bipolar disorder identified
               using a combined genome-wide linkage and copy number variation analysis},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {42},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0076-y},
  doi       = {10.1186/s13040-015-0076-y},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LekmanKGHK15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LiOLL15,
  author    = {Dingcheng Li and
               Janet Okamoto and
               Hongfang Liu and
               Scott Leischow},
  title     = {A bibliometric analysis on tobacco regulation investigators},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {11},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0043-7},
  doi       = {10.1186/s13040-015-0043-7},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LiOLL15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LishoutGMWS15,
  author    = {Fran{\c{c}}ois Van Lishout and
               Francesco Gadaleta and
               Jason H. Moore and
               Louis Wehenkel and
               Kristel Van Steen},
  title     = {gammaMAXT: a fast multiple-testing correction algorithm},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {36},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0069-x},
  doi       = {10.1186/s13040-015-0069-x},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LishoutGMWS15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LiuLP15,
  author    = {Zhenqiu Liu and
               Shili Lin and
               Steven T. Piantadosi},
  title     = {Network construction and structure detection with metagenomic count
               data},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {40},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0072-2},
  doi       = {10.1186/s13040-015-0072-2},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LiuLP15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LuAMHHCB15,
  author    = {Pinyi Lu and
               Vida Abedi and
               Yongguo Mei and
               Raquel Hontecillas and
               Stefan Hoops and
               Adria Carbo and
               Josep Bassaganya{-}Riera},
  title     = {Supervised learning methods in modeling of {CD4+} {T} cell heterogeneity},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {27},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0060-6},
  doi       = {10.1186/s13040-015-0060-6},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LuAMHHCB15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MadrigalK15,
  author    = {Pedro Madrigal and
               Pawel Krajewski},
  title     = {Uncovering correlated variabilityin epigenomic datasets usingthe Karhunen-Loeve
               transform},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {20},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0051-7},
  doi       = {10.1186/s13040-015-0051-7},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MadrigalK15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MeysmanZCGL15,
  author    = {Pieter Meysman and
               Cheng Zhou and
               Boris Cule and
               Bart Goethals and
               Kris Laukens},
  title     = {Mining the entire Protein DataBank for frequent spatially cohesive
               amino acid patterns},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {4},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0038-4},
  doi       = {10.1186/s13040-015-0038-4},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MeysmanZCGL15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MuruganSAVPVK15,
  author    = {Kasi Murugan and
               Sangeetha Shanmugasamy and
               Saleh Al{-}Sohaibani and
               Naga Vignesh and
               Kandavel Palanikannan and
               Antonydhason Vimala and
               Gopal Kumar},
  title     = {TaxKB: a knowledge base for new taxane-related drug discovery},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {19},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0053-5},
  doi       = {10.1186/s13040-015-0053-5},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MuruganSAVPVK15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Reyes-GibbyWYS15,
  author    = {Cielito Reyes{-}Gibby and
               Jian Wang and
               Sai{-}Ching Yeung and
               Sanjay Shete},
  title     = {Informative gene network for chemotherapy-induced peripheral neuropathy},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {24},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0058-0},
  doi       = {10.1186/s13040-015-0058-0},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Reyes-GibbyWYS15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/SaberE15,
  author    = {Haifa Ben Saber and
               Mourad Elloumi},
  title     = {A novel biclustering algorithm of binary microarray data: BiBinCons
               and BiBinAlter},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {38},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0070-4},
  doi       = {10.1186/s13040-015-0070-4},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/SaberE15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ShenCCZYZGLZ15,
  author    = {Weike Shen and
               Yuan Cao and
               Lei Cha and
               Xufei Zhang and
               Xiaomin Ying and
               Wei Zhang and
               Kun Ge and
               Wuju Li and
               Li Zhong},
  title     = {Predicting linear B-cell epitopes using amino acid anchoring pair
               composition},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {14},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0047-3},
  doi       = {10.1186/s13040-015-0047-3},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ShenCCZYZGLZ15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ThompsonMM15,
  author    = {Paul Thompson and
               Juliette Madan and
               Jason H. Moore},
  title     = {Prediction of relevant biomedical documents: a human microbiome case
               study},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {28},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0061-5},
  doi       = {10.1186/s13040-015-0061-5},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ThompsonMM15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ValbaNSSKV15,
  author    = {Olga Valba and
               Sergei Nechaev and
               Mark G. Sterken and
               L. Basten Snoek and
               Jan E. Kammenga and
               Olga Vasieva},
  title     = {On predicting regulatory genes by analysis of functional networks
               in C. elegans},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {33},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0066-0},
  doi       = {10.1186/s13040-015-0066-0},
  timestamp = {Wed, 15 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ValbaNSSKV15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/WallerGSPJ15,
  author    = {Tomasz Waller and
               Tomasz Gubala and
               Krzysztof Sarapata and
               Monika Piwowar and
               Wiktor Jurkowski},
  title     = {{DNA} microarray integromics analysis platform},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {18},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0052-6},
  doi       = {10.1186/s13040-015-0052-6},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/WallerGSPJ15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Wang15,
  author    = {Limin Wang},
  title     = {Mining causal relationships among clinical variables for cancer diagnosis
               based on Bayesian analysis},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {13},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0046-4},
  doi       = {10.1186/s13040-015-0046-4},
  timestamp = {Tue, 09 Feb 2021 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Wang15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/WangLCZ15,
  author    = {Liwei Wang and
               Hongfang Liu and
               Christopher G. Chute and
               Qian Zhu},
  title     = {Cancer based pharmacogenomics network supported with scientific evidences:
               from the view of drug repurposing},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {9},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0042-8},
  doi       = {10.1186/s13040-015-0042-8},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/WangLCZ15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/WeissZHDSSM15,
  author    = {Talia Weiss and
               Amanda L. Zieselman and
               Douglas P. Hill and
               Solomon Gilbert Diamond and
               Li Shen and
               Andrew J. Saykin and
               Jason H. Moore},
  title     = {The role of visualization and 3-D printing in biological data mining},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {22},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0056-2},
  doi       = {10.1186/s13040-015-0056-2},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/WeissZHDSSM15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/WeitschekCF15,
  author    = {Emanuel Weitschek and
               Fabio Cunial and
               Giovanni Felici},
  title     = {{LAF:} Logic Alignment Free and its application to bacterial genomes
               classification},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {39},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0073-1},
  doi       = {10.1186/s13040-015-0073-1},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/WeitschekCF15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/WilliamsM15,
  author    = {Scott M. Williams and
               Jason H. Moore},
  title     = {Lumping versus splitting: the need for biological data mining in precision
               medicine},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {16},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0049-1},
  doi       = {10.1186/s13040-015-0049-1},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/WilliamsM15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Zhang15,
  author    = {Yuji Zhang},
  title     = {Network analysis reveals stage-specific changes in zebrafish embryo
               development using time course whole transcriptome profiling and prior
               biological knowledge},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {26},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0057-1},
  doi       = {10.1186/s13040-015-0057-1},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Zhang15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ZhangCSZM15,
  author    = {Jian Zhang and
               Wenhan Chen and
               Pingping Sun and
               Xiaowei Zhao and
               Zhiqiang Ma},
  title     = {Prediction of protein solvent accessibility using {PSO-SVR} with multiple
               sequence-derived features and weighted sliding window scheme},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {3},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-014-0031-3},
  doi       = {10.1186/s13040-014-0031-3},
  timestamp = {Fri, 15 Jan 2021 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ZhangCSZM15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ZhangX15,
  author    = {Qiang Zhang and
               Yuan Xu},
  title     = {Motif mining based on network space compression},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {29},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-014-0029-x},
  doi       = {10.1186/s13040-014-0029-x},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ZhangX15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ZhangZL15,
  author    = {Yuji Zhang and
               Qian Zhu and
               Hongfang Liu},
  title     = {Next generation informatics for big data in precision medicine era},
  journal   = {BioData Min.},
  volume    = {8},
  pages     = {34},
  year      = {2015},
  url       = {https://doi.org/10.1186/s13040-015-0064-2},
  doi       = {10.1186/s13040-015-0064-2},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ZhangZL15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Aguilar-BonavidesSL14,
  author    = {Clemente Aguilar{-}Bonavides and
               Reinaldo Sanchez{-}Arias and
               Cristina Lanzas},
  title     = {Accurate prediction of major histocompatibility complex class {II}
               epitopes by sparse representation via l1-minimization},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {23},
  year      = {2014},
  url       = {https://doi.org/10.1186/1756-0381-7-23},
  doi       = {10.1186/1756-0381-7-23},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Aguilar-BonavidesSL14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/CheJMB14,
  author    = {Ronglin Che and
               John R. Jack and
               Alison A. Motsinger{-}Reif and
               Chad C. Brown},
  title     = {An adaptive permutation approach for genome-wide association study:
               evaluation and recommendations for use},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {9},
  year      = {2014},
  url       = {https://doi.org/10.1186/1756-0381-7-9},
  doi       = {10.1186/1756-0381-7-9},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/CheJMB14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/CiesielskiPWKSHBLPGSARMW14,
  author    = {Timothy H. Ciesielski and
               Sarah A. Pendergrass and
               Marquitta J. White and
               Nuri Kodaman and
               Rafal S. Sobota and
               Minjun Huang and
               Jacquelaine Bartlett and
               Jing Li and
               Qinxin Pan and
               Jiang Gui and
               Scott B. Selleck and
               Christopher I. Amos and
               Marylyn D. Ritchie and
               Jason H. Moore and
               Scott M. Williams},
  title     = {Diverse convergent evidence in the genetic analysis of complex disease:
               coordinating omic, informatic, and experimental evidence to better
               identify and validate risk factors},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {10},
  year      = {2014},
  url       = {https://doi.org/10.1186/1756-0381-7-10},
  doi       = {10.1186/1756-0381-7-10},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/CiesielskiPWKSHBLPGSARMW14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/DarabosWGLWM14,
  author    = {Christian Darabos and
               Marquitta J. White and
               Britney E. Graham and
               Derek N. Leung and
               Scott M. Williams and
               Jason H. Moore},
  title     = {The multiscale backbone of the human phenotype network based on biological
               pathways},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {1},
  year      = {2014},
  url       = {https://doi.org/10.1186/1756-0381-7-1},
  doi       = {10.1186/1756-0381-7-1},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/DarabosWGLWM14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/DasguptaSMBM14,
  author    = {Abhijit Dasgupta and
               Silke Szymczak and
               Jason H. Moore and
               Joan E. Bailey{-}Wilson and
               James D. Malley},
  title     = {Risk estimation using probability machines},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {2},
  year      = {2014},
  url       = {https://doi.org/10.1186/1756-0381-7-2},
  doi       = {10.1186/1756-0381-7-2},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/DasguptaSMBM14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/FloudasUKBV14,
  author    = {Charalampos S. Floudas and
               Nara Um and
               M. Kamboh and
               M. Michael Barmada and
               Shyam Visweswaran},
  title     = {Identifying genetic interactions associated with late-onset Alzheimer's
               disease},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {35},
  year      = {2014},
  url       = {https://doi.org/10.1186/s13040-014-0035-z},
  doi       = {10.1186/s13040-014-0035-z},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/FloudasUKBV14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/HeiderDWH14,
  author    = {Dominik Heider and
               Jan Dybowski and
               Christoph Wilms and
               Daniel Hoffmann},
  title     = {A simple structure-based model for the prediction of {HIV-1} co-receptor
               tropism},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {14},
  year      = {2014},
  url       = {https://doi.org/10.1186/1756-0381-7-14},
  doi       = {10.1186/1756-0381-7-14},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/HeiderDWH14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/HuPALCTKM14,
  author    = {Ting Hu and
               Qinxin Pan and
               Angeline S. Andrew and
               Jillian M. Langer and
               Michael D. Cole and
               Craig R. Tomlinson and
               Margaret R. Karagas and
               Jason H. Moore},
  title     = {Functional genomics annotation of a statistical epistasis network
               associated with bladder cancer susceptibility},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {5},
  year      = {2014},
  url       = {https://doi.org/10.1186/1756-0381-7-5},
  doi       = {10.1186/1756-0381-7-5},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/HuPALCTKM14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/IshwaranM14,
  author    = {Hemant Ishwaran and
               James D. Malley},
  title     = {Synthetic learning machines},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {28},
  year      = {2014},
  url       = {https://doi.org/10.1186/s13040-014-0028-y},
  doi       = {10.1186/s13040-014-0028-y},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/IshwaranM14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/KimLDFPR14,
  author    = {Do Kyoon Kim and
               Ruowang Li and
               Scott M. Dudek and
               Alex T. Frase and
               Sarah A. Pendergrass and
               Marylyn D. Ritchie},
  title     = {Knowledge-driven genomic interactions: an application in ovarian cancer},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {20},
  year      = {2014},
  url       = {https://doi.org/10.1186/1756-0381-7-20},
  doi       = {10.1186/1756-0381-7-20},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/KimLDFPR14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Langdon14,
  author    = {William B. Langdon},
  title     = {Mycoplasma contamination in the 1000 Genomes Project},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {3},
  year      = {2014},
  url       = {https://doi.org/10.1186/1756-0381-7-3},
  doi       = {10.1186/1756-0381-7-3},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Langdon14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LaurilaAKNHOLL14,
  author    = {Kirsti Laurila and
               Reija Autio and
               Lingjia Kong and
               Elisa N{\"{a}}rv{\"{a}} and
               Samer Hussein and
               Timo Otonkoski and
               Riitta Lahesmaa and
               Harri L{\"{a}}hdesm{\"{a}}ki},
  title     = {Integrative genomics and transcriptomics analysis of human embryonic
               and induced pluripotent stem cells},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {32},
  year      = {2014},
  url       = {https://doi.org/10.1186/s13040-014-0032-2},
  doi       = {10.1186/s13040-014-0032-2},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LaurilaAKNHOLL14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LekmanHAKUCMRMMK14,
  author    = {Magnus Lekman and
               Ola H{\"{o}}ssjer and
               Peter C. Andrews and
               Henrik K{\"{a}}llberg and
               Daniel Uvehag and
               Dennis S. Charney and
               Husseini K. Manji and
               John A. Rush and
               Francis J. McMahon and
               Jason H. Moore and
               Ingrid Kockum},
  title     = {The genetic interacting landscape of 63 candidate genes in Major Depressive
               Disorder: an explorative study},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {19},
  year      = {2014},
  url       = {https://doi.org/10.1186/1756-0381-7-19},
  doi       = {10.1186/1756-0381-7-19},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LekmanHAKUCMRMMK14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MalleyM14,
  author    = {James D. Malley and
               Jason H. Moore},
  title     = {Innovation is often unnerving: the door into summer},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {12},
  year      = {2014},
  url       = {https://doi.org/10.1186/1756-0381-7-12},
  doi       = {10.1186/1756-0381-7-12},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MalleyM14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MalleyM14a,
  author    = {James D. Malley and
               Jason H. Moore},
  title     = {First complex, then simple},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {13},
  year      = {2014},
  url       = {https://doi.org/10.1186/1756-0381-7-13},
  doi       = {10.1186/1756-0381-7-13},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MalleyM14a.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MalleyMM14,
  author    = {James D. Malley and
               Karen G. Malley and
               Jason H. Moore},
  title     = {O brave new world that has such machines in it},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {26},
  year      = {2014},
  url       = {https://doi.org/10.1186/1756-0381-7-26},
  doi       = {10.1186/1756-0381-7-26},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MalleyMM14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MitchellHGBFPBC14,
  author    = {Sabrina L. Mitchell and
               Jacob B. Hall and
               Robert J. Goodloe and
               Jonathan Boston and
               Eric Farber{-}Eger and
               Sarah A. Pendergrass and
               William S. Bush and
               Dana C. Crawford},
  title     = {Investigating the relationship between mitochondrial genetic variation
               and cardiovascular-related traits to develop a framework for mitochondrial
               phenome-wide association studies},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {6},
  year      = {2014},
  url       = {https://doi.org/10.1186/1756-0381-7-6},
  doi       = {10.1186/1756-0381-7-6},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MitchellHGBFPBC14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MohammedFN14,
  author    = {Emad A. Mohammed and
               Behrouz Homayoun Far and
               Christopher Naugler},
  title     = {Applications of the MapReduce programming framework to clinical big
               data analysis: current landscape and future trends},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {22},
  year      = {2014},
  url       = {https://doi.org/10.1186/1756-0381-7-22},
  doi       = {10.1186/1756-0381-7-22},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MohammedFN14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ParkerCB14,
  author    = {Douglas Stott Parker and
               Eliza Congdon and
               Robert M. Bilder},
  title     = {Hypothesis exploration with visualization of variance},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {11},
  year      = {2014},
  url       = {https://doi.org/10.1186/1756-0381-7-11},
  doi       = {10.1186/1756-0381-7-11},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ParkerCB14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ParnellBDNCMLHLRO14,
  author    = {Laurence D. Parnell and
               Britt A. Blokker and
               Hassan S. Dashti and
               Paula{-}Dene Nesbeth and
               Brittany Cooper and
               Yiyi Ma and
               Yu{-}Chi Lee and
               Ruixue Hou and
               Chao{-}Qiang Lai and
               Kris Richardson and
               Jos{\'{e}} M. Ordov{\'{a}}s},
  title     = {CardioGxE, a catalog of gene-environment interactions for cardiometabolic
               traits},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {21},
  year      = {2014},
  url       = {https://doi.org/10.1186/1756-0381-7-21},
  doi       = {10.1186/1756-0381-7-21},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ParnellBDNCMLHLRO14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/PouladiCM14,
  author    = {Nima Pouladi and
               Richard Cowper{-}Sallari and
               Jason H. Moore},
  title     = {Combining functional genomics strategies identifies modular heterogeneity
               of breast cancer intrinsic subtypes},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {27},
  year      = {2014},
  url       = {https://doi.org/10.1186/1756-0381-7-27},
  doi       = {10.1186/1756-0381-7-27},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/PouladiCM14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/RotroffJCCM14,
  author    = {Daniel M. Rotroff and
               John R. Jack and
               Nathan Campbell and
               Scott Clark and
               Alison A. Motsinger{-}Reif},
  title     = {PGxClean: a quality control {GUI} for the Affymetrix {DMET} chip and
               other candidate gene studies with non-biallelic alleles},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {24},
  year      = {2014},
  url       = {https://doi.org/10.1186/1756-0381-7-24},
  doi       = {10.1186/1756-0381-7-24},
  timestamp = {Wed, 08 Jul 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/RotroffJCCM14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/SalemO14,
  author    = {Saeed Salem and
               Cagri Ozcaglar},
  title     = {Hybrid coexpression link similarity graph clustering for mining biological
               modules from multiple gene expression datasets},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {16},
  year      = {2014},
  url       = {https://doi.org/10.1186/1756-0381-7-16},
  doi       = {10.1186/1756-0381-7-16},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/SalemO14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/TaeKBG14,
  author    = {Hongseok Tae and
               Enusha Karunasena and
               Jasmin H. Bavarva and
               Harold R. Garner},
  title     = {Updating microbial genomic sequences: improving accuracy {\&}
               innovation},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {25},
  year      = {2014},
  url       = {https://doi.org/10.1186/1756-0381-7-25},
  doi       = {10.1186/1756-0381-7-25},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/TaeKBG14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/TaoWLZ14,
  author    = {Cui Tao and
               Puqiang Wu and
               Yi Luo and
               Yuji Zhang},
  title     = {Linked vaccine adverse event data from {VAERS} for biomedical data
               analysis and longitudinal studies},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {36},
  year      = {2014},
  url       = {https://doi.org/10.1186/s13040-014-0036-y},
  doi       = {10.1186/s13040-014-0036-y},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/TaoWLZ14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/UrbanowiczGKM14,
  author    = {Ryan J. Urbanowicz and
               Ambrose Granizo{-}Mackenzie and
               Jeff Kiralis and
               Jason H. Moore},
  title     = {A Classification and Characterization of Two-Locus, Pure, Strict,
               Epistatic Models for Simulation and Detection},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {8},
  year      = {2014},
  url       = {https://doi.org/10.1186/1756-0381-7-8},
  doi       = {10.1186/1756-0381-7-8},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/UrbanowiczGKM14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/WangP14,
  author    = {Yunli Wang and
               Youlian Pan},
  title     = {Semi-supervised consensus clustering for gene expression data analysis},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {7},
  year      = {2014},
  url       = {https://doi.org/10.1186/1756-0381-7-7},
  doi       = {10.1186/1756-0381-7-7},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/WangP14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/WeitschekFF14,
  author    = {Emanuel Weitschek and
               Giulia Fiscon and
               Giovanni Felici},
  title     = {Supervised {DNA} Barcodes species classification: analysis, comparisons
               and results},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {4},
  year      = {2014},
  url       = {https://doi.org/10.1186/1756-0381-7-4},
  doi       = {10.1186/1756-0381-7-4},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/WeitschekFF14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ZhouLZ14,
  author    = {Yan Zhou and
               Nan Lin and
               Baoxue Zhang},
  title     = {Erratum: An iteration normalization and test method for differential
               expression analysis of RNA-seq data},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {30},
  year      = {2014},
  url       = {https://doi.org/10.1186/s13040-014-0030-4},
  doi       = {10.1186/s13040-014-0030-4},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ZhouLZ14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ZhouLZZ14,
  author    = {Yan Zhou and
               Nan Lin and
               Yang Zhang and
               Baoxue Zhang},
  title     = {An iteration normalization and test method for differential expression
               analysis of RNA-seq data},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {15},
  year      = {2014},
  url       = {https://doi.org/10.1186/1756-0381-7-15},
  doi       = {10.1186/1756-0381-7-15},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ZhouLZZ14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ZieselmanFHAGSSMa14,
  author    = {Amanda L. Zieselman and
               Jonathan M. Fisher and
               Ting Hu and
               Peter C. Andrews and
               Casey S. Greene and
               Li Shen and
               Andrew J. Saykin and
               Jason H. Moore},
  title     = {Computational genetics analysis of grey matter density in Alzheimer's
               disease},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {17},
  year      = {2014},
  url       = {https://doi.org/10.1186/1756-0381-7-17},
  doi       = {10.1186/1756-0381-7-17},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ZieselmanFHAGSSMa14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ZimmermannBLMICOLWHG14,
  author    = {Philip Zimmermann and
               Stefan Bleuler and
               Oliver Laule and
               Florian Martin and
               Nikolai V. Ivanov and
               Prisca Campanoni and
               Karen Oishi and
               Nicolas Lugon{-}Moulin and
               Markus Wyss and
               Tomas Hruz and
               Wilhelm Gruissem},
  title     = {ExpressionData - {A} public resource of high quality curated datasets
               representing gene expression across anatomy, development and experimental
               conditions},
  journal   = {BioData Min.},
  volume    = {7},
  pages     = {18},
  year      = {2014},
  url       = {https://doi.org/10.1186/1756-0381-7-18},
  doi       = {10.1186/1756-0381-7-18},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ZimmermannBLMICOLWHG14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/CamioloP13,
  author    = {Salvatore Camiolo and
               Andrea Porceddu},
  title     = {gff2Sequence, a new user friendly tool for the generation of genomic
               sequences},
  journal   = {BioData Min.},
  volume    = {6},
  pages     = {15},
  year      = {2013},
  url       = {https://doi.org/10.1186/1756-0381-6-15},
  doi       = {10.1186/1756-0381-6-15},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/CamioloP13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/CollinsHWSWM13,
  author    = {Ryan L. Collins and
               Ting Hu and
               Christian Wejse and
               Giorgio Sirugo and
               Scott M. Williams and
               Jason H. Moore},
  title     = {Multifactor dimensionality reduction reveals a three-locus epistatic
               interaction associated with susceptibility to pulmonary tuberculosis},
  journal   = {BioData Min.},
  volume    = {6},
  pages     = {4},
  year      = {2013},
  url       = {https://doi.org/10.1186/1756-0381-6-4},
  doi       = {10.1186/1756-0381-6-4},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/CollinsHWSWM13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/DaiCBLM13,
  author    = {Hongying Dai and
               Richard J. Charnigo and
               Mara Becker and
               J. Steven Leeder and
               Alison A. Motsinger{-}Reif},
  title     = {Risk score modeling of multiple gene to gene interactions using aggregated-multifactor
               dimensionality reduction},
  journal   = {BioData Min.},
  volume    = {6},
  pages     = {1},
  year      = {2013},
  url       = {https://doi.org/10.1186/1756-0381-6-1},
  doi       = {10.1186/1756-0381-6-1},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/DaiCBLM13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/FleurenTVFHRSVA13,
  author    = {Wilco W. M. Fleuren and
               Erik J. M. Toonen and
               Stefan Verhoeven and
               Raoul Frijters and
               Tim Hulsen and
               Ton Rullmann and
               Ren{\'{e}} C. van Schaik and
               Jacob de Vlieg and
               Wynand Alkema},
  title     = {Identification of new biomarker candidates for glucocorticoid induced
               insulin resistance using literature mining},
  journal   = {BioData Min.},
  volume    = {6},
  pages     = {2},
  year      = {2013},
  url       = {https://doi.org/10.1186/1756-0381-6-2},
  doi       = {10.1186/1756-0381-6-2},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/FleurenTVFHRSVA13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/GrunertL13,
  author    = {Steffen Grunert and
               Dirk Labudde},
  title     = {Graph representation of high-dimensional alpha-helical membrane protein
               data},
  journal   = {BioData Min.},
  volume    = {6},
  pages     = {21},
  year      = {2013},
  url       = {https://doi.org/10.1186/1756-0381-6-21},
  doi       = {10.1186/1756-0381-6-21},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/GrunertL13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/HoenGM13,
  author    = {Anne Gatewood Hoen and
               Shea N. Gardner and
               Jason H. Moore},
  title     = {Identification of SNPs associated with variola virus virulence},
  journal   = {BioData Min.},
  volume    = {6},
  pages     = {3},
  year      = {2013},
  url       = {https://doi.org/10.1186/1756-0381-6-3},
  doi       = {10.1186/1756-0381-6-3},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/HoenGM13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/HuangBBCCJJLMMMNPPPRSSWXZZ13,
  author    = {Xiuzhen Huang and
               Barry Bruce and
               Alison Buchan and
               Clare Bates Congdon and
               Carole L. Cramer and
               Steven F. Jennings and
               Hongmei Jiang and
               Zenglu Li and
               Gail McClure and
               Rick McMullen and
               Jason H. Moore and
               Bindu Nanduri and
               Joan Peckham and
               Andy D. Perkins and
               Shawn W. Polson and
               Bhanu Rekepalli and
               Saeed Salem and
               Jennifer Specker and
               Donald C. Wunsch and
               Donghai Xiong and
               Shuzhong Zhang and
               Zhongming Zhao},
  title     = {No-boundary thinking in bioinformatics research},
  journal   = {BioData Min.},
  volume    = {6},
  pages     = {19},
  year      = {2013},
  url       = {https://doi.org/10.1186/1756-0381-6-19},
  doi       = {10.1186/1756-0381-6-19},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/HuangBBCCJJLMMMNPPPRSSWXZZ13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/JohnLGS13,
  author    = {Jestinah M. Mahachie John and
               Fran{\c{c}}ois Van Lishout and
               Elena S. Gusareva and
               Kristel Van Steen},
  title     = {A robustness study of parametric and non-parametric tests in model-based
               multifactor dimensionality reduction for epistasis detection},
  journal   = {BioData Min.},
  volume    = {6},
  pages     = {9},
  year      = {2013},
  url       = {https://doi.org/10.1186/1756-0381-6-9},
  doi       = {10.1186/1756-0381-6-9},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/JohnLGS13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/KimLDR13,
  author    = {Dokyoon Kim and
               Ruowang Li and
               Scott M. Dudek and
               Marylyn D. Ritchie},
  title     = {{ATHENA:} Identifying interactions between different levels of genomic
               data associated with cancer clinical outcomes using grammatical evolution
               neural network},
  journal   = {BioData Min.},
  volume    = {6},
  pages     = {23},
  year      = {2013},
  url       = {https://doi.org/10.1186/1756-0381-6-23},
  doi       = {10.1186/1756-0381-6-23},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/KimLDR13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MalleyDM13,
  author    = {James D. Malley and
               Abhijit Dasgupta and
               Jason H. Moore},
  title     = {The limits of p-values for biological data mining},
  journal   = {BioData Min.},
  volume    = {6},
  pages     = {10},
  year      = {2013},
  url       = {https://doi.org/10.1186/1756-0381-6-10},
  doi       = {10.1186/1756-0381-6-10},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MalleyDM13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MalleyM13,
  author    = {James D. Malley and
               Jason H. Moore},
  title     = {The disconnect between classical biostatistics and the biological
               data mining community},
  journal   = {BioData Min.},
  volume    = {6},
  pages     = {12},
  year      = {2013},
  url       = {https://doi.org/10.1186/1756-0381-6-12},
  doi       = {10.1186/1756-0381-6-12},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MalleyM13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MitsakakisREW13,
  author    = {Nicholas Mitsakakis and
               Zak Razak and
               Michael D. Escobar and
               J. Tim Westwood},
  title     = {Prediction of Drosophila melanogaster gene function using Support
               Vector Machines},
  journal   = {BioData Min.},
  volume    = {6},
  pages     = {8},
  year      = {2013},
  url       = {https://doi.org/10.1186/1756-0381-6-8},
  doi       = {10.1186/1756-0381-6-8},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MitsakakisREW13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MooreR13,
  author    = {Jason H. Moore and
               Marylyn D. Ritchie},
  title     = {The central role of biological data mining in connecting diverse disciplines},
  journal   = {BioData Min.},
  volume    = {6},
  pages     = {14},
  year      = {2013},
  url       = {http://www.biodatamining.org/content/6/1/14},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MooreR13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MuttRS13,
  author    = {Eshita Mutt and
               Sudha Rani and
               Ramanathan Sowdhamini},
  title     = {Structural updates of alignment of protein domains and consequences
               on evolutionary models of domain superfamilies},
  journal   = {BioData Min.},
  volume    = {6},
  pages     = {20},
  year      = {2013},
  url       = {https://doi.org/10.1186/1756-0381-6-20},
  doi       = {10.1186/1756-0381-6-20},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MuttRS13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/NakamuraKOK13,
  author    = {Munehiro Nakamura and
               Yusuke Kajiwara and
               Atsushi Otsuka and
               Haruhiko Kimura},
  title     = {{LVQ-SMOTE} - Learning Vector Quantization based Synthetic Minority
               Over-sampling Technique for biomedical data},
  journal   = {BioData Min.},
  volume    = {6},
  pages     = {16},
  year      = {2013},
  url       = {https://doi.org/10.1186/1756-0381-6-16},
  doi       = {10.1186/1756-0381-6-16},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/NakamuraKOK13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/OkserPA13,
  author    = {Sebastian Okser and
               Tapio Pahikkala and
               Tero Aittokallio},
  title     = {Genetic variants and their interactions in disease risk prediction
               - machine learning and network perspectives},
  journal   = {BioData Min.},
  volume    = {6},
  pages     = {5},
  year      = {2013},
  url       = {https://doi.org/10.1186/1756-0381-6-5},
  doi       = {10.1186/1756-0381-6-5},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/OkserPA13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/PavlopoulosOISM0AI13,
  author    = {Georgios A. Pavlopoulos and
               Anastasis Oulas and
               Ernesto Iacucci and
               Alejandro Sifrim and
               Yves Moreau and
               Reinhard Schneider and
               Jan Aerts and
               Ioannis Iliopoulos},
  title     = {Unraveling genomic variation from next generation sequencing data},
  journal   = {BioData Min.},
  volume    = {6},
  pages     = {13},
  year      = {2013},
  url       = {https://doi.org/10.1186/1756-0381-6-13},
  doi       = {10.1186/1756-0381-6-13},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/PavlopoulosOISM0AI13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/PendergrassFWWKMR13,
  author    = {Sarah A. Pendergrass and
               Alex T. Frase and
               John R. Wallace and
               Daniel Wolfe and
               Neerja Katiyar and
               Carrie Moore and
               Marylyn D. Ritchie},
  title     = {Genomic analyses with biofilter 2.0: knowledge driven filtering, annotation,
               and model development},
  journal   = {BioData Min.},
  volume    = {6},
  pages     = {25},
  year      = {2013},
  url       = {https://doi.org/10.1186/1756-0381-6-25},
  doi       = {10.1186/1756-0381-6-25},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/PendergrassFWWKMR13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/PetrochilosSGA13,
  author    = {Deanna Petrochilos and
               Ali Shojaie and
               John H. Gennari and
               Neil F. Abernethy},
  title     = {Using random walks to identify cancer-associated modules in expression
               data},
  journal   = {BioData Min.},
  volume    = {6},
  pages     = {17},
  year      = {2013},
  url       = {https://doi.org/10.1186/1756-0381-6-17},
  doi       = {10.1186/1756-0381-6-17},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/PetrochilosSGA13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/PreepremG13,
  author    = {Thanawadee Preeprem and
               Greg Gibson},
  title     = {An association-adjusted consensus deleterious scheme to classify homozygous
               Mis-sense mutations for personal genome interpretation},
  journal   = {BioData Min.},
  volume    = {6},
  pages     = {24},
  year      = {2013},
  url       = {https://doi.org/10.1186/1756-0381-6-24},
  doi       = {10.1186/1756-0381-6-24},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/PreepremG13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/RosenbaumJDZ13,
  author    = {Lars Rosenbaum and
               Andreas Jahn and
               Alexander D{\"{o}}rr and
               Andreas Zell},
  title     = {Optimization and visualization of the edge weights in optimal assignment
               methods for virtual screening},
  journal   = {BioData Min.},
  volume    = {6},
  pages     = {7},
  year      = {2013},
  url       = {https://doi.org/10.1186/1756-0381-6-7},
  doi       = {10.1186/1756-0381-6-7},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/RosenbaumJDZ13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/SuAKB13,
  author    = {Chengwei Su and
               Angeline S. Andrew and
               Margaret R. Karagas and
               Mark E. Borsuk},
  title     = {Using Bayesian networks to discover relations between genes, environment,
               and disease},
  journal   = {BioData Min.},
  volume    = {6},
  pages     = {6},
  year      = {2013},
  url       = {https://doi.org/10.1186/1756-0381-6-6},
  doi       = {10.1186/1756-0381-6-6},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/SuAKB13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Taguchi13,
  author    = {Y{-}h. Taguchi},
  title     = {MicroRNA-mediated regulation of target genes in several brain regions
               is correlated to both microRNA-targeting-specific promoter methylation
               and differential microRNA expression},
  journal   = {BioData Min.},
  volume    = {6},
  pages     = {11},
  year      = {2013},
  url       = {https://doi.org/10.1186/1756-0381-6-11},
  doi       = {10.1186/1756-0381-6-11},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Taguchi13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/WilliamsM13,
  author    = {Scott M. Williams and
               Jason H. Moore},
  title     = {Big Data analysis on autopilot?},
  journal   = {BioData Min.},
  volume    = {6},
  pages     = {22},
  year      = {2013},
  url       = {https://doi.org/10.1186/1756-0381-6-22},
  doi       = {10.1186/1756-0381-6-22},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/WilliamsM13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/WolfeDRP13,
  author    = {Daniel Wolfe and
               Scott M. Dudek and
               Marylyn D. Ritchie and
               Sarah A. Pendergrass},
  title     = {Visualizing genomic information across chromosomes with PhenoGram},
  journal   = {BioData Min.},
  volume    = {6},
  pages     = {18},
  year      = {2013},
  url       = {https://doi.org/10.1186/1756-0381-6-18},
  doi       = {10.1186/1756-0381-6-18},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/WolfeDRP13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/AbediZYF12,
  author    = {Vida Abedi and
               Ramin Zand and
               Mohammed Yeasin and
               Fazle Faisal},
  title     = {An automated framework for hypotheses generation using literature},
  journal   = {BioData Min.},
  volume    = {5},
  pages     = {13},
  year      = {2012},
  url       = {https://doi.org/10.1186/1756-0381-5-13},
  doi       = {10.1186/1756-0381-5-13},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/AbediZYF12.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Andrade-NavarroPP12,
  author    = {Miguel A. Andrade{-}Navarro and
               Gareth A. Palidwor and
               Carolina Perez{-}Iratxeta},
  title     = {Peer2ref: a peer-reviewer finding web tool that uses author disambiguation},
  journal   = {BioData Min.},
  volume    = {5},
  pages     = {14},
  year      = {2012},
  url       = {https://doi.org/10.1186/1756-0381-5-14},
  doi       = {10.1186/1756-0381-5-14},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Andrade-NavarroPP12.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/BrownHMKMM12,
  author    = {Chad C. Brown and
               Tammy M. Havener and
               Marisa Wong Medina and
               Ronald M. Krauss and
               Howard L. McLeod and
               Alison A. Motsinger{-}Reif},
  title     = {Multivariate methods and software for association mapping in dose-response
               genome-wide association studies},
  journal   = {BioData Min.},
  volume    = {5},
  pages     = {21},
  year      = {2012},
  url       = {https://doi.org/10.1186/1756-0381-5-21},
  doi       = {10.1186/1756-0381-5-21},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/BrownHMKMM12.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/BulowBRBH12,
  author    = {Lorenz B{\"{u}}low and
               Julio C. Bol{\'{\i}}var and
               Jonas Ruhe and
               Yuri Brill and
               Reinhard Hehl},
  title     = {'MicroRNA Targets', a new AthaMap web-tool for genome-wide identification
               of miRNA targets in Arabidopsis thaliana},
  journal   = {BioData Min.},
  volume    = {5},
  pages     = {7},
  year      = {2012},
  url       = {https://doi.org/10.1186/1756-0381-5-7},
  doi       = {10.1186/1756-0381-5-7},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/BulowBRBH12.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Cruz-CanoLL12,
  author    = {Raul Cruz{-}Cano and
               Mei{-}Ling Ting Lee and
               Ming{-}Ying Leung},
  title     = {Logic minimization and rule extraction for identification of functional
               sites in molecular sequences},
  journal   = {BioData Min.},
  volume    = {5},
  pages     = {10},
  year      = {2012},
  url       = {https://doi.org/10.1186/1756-0381-5-10},
  doi       = {10.1186/1756-0381-5-10},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Cruz-CanoLL12.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/DaiBBLGM12,
  author    = {Hongying Dai and
               Madhusudan Bhandary and
               Mara Becker and
               J. Steven Leeder and
               Roger Gaedigk and
               Alison A. Motsinger{-}Reif},
  title     = {Global tests of P-values for multifactor dimensionality reduction
               models in selection of optimal number of target genes},
  journal   = {BioData Min.},
  volume    = {5},
  pages     = {3},
  year      = {2012},
  url       = {https://doi.org/10.1186/1756-0381-5-3},
  doi       = {10.1186/1756-0381-5-3},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/DaiBBLGM12.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/GonzalezCDD12,
  author    = {Ignacio Gonz{\'{a}}lez and
               Kim{-}Anh L{\^{e}} Cao and
               Melissa J. Davis and
               S{\'{e}}bastien D{\'{e}}jean},
  title     = {Visualising associations between paired 'omics' data sets},
  journal   = {BioData Min.},
  volume    = {5},
  pages     = {19},
  year      = {2012},
  url       = {https://doi.org/10.1186/1756-0381-5-19},
  doi       = {10.1186/1756-0381-5-19},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/GonzalezCDD12.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/GuiTB12,
  author    = {Jiang Gui and
               Tor D. Tosteson and
               Mark E. Borsuk},
  title     = {Weighted multiple testing procedures for genomic studies},
  journal   = {BioData Min.},
  volume    = {5},
  pages     = {4},
  year      = {2012},
  url       = {https://doi.org/10.1186/1756-0381-5-4},
  doi       = {10.1186/1756-0381-5-4},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/GuiTB12.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/KimAAFWHRAM12,
  author    = {Nora Kim and
               Peter C. Andrews and
               Folkert W. Asselbergs and
               H. Robert Frost and
               Scott M. Williams and
               Brent T. Harris and
               Cynthia Read and
               Kathleen D. Askland and
               Jason H. Moore},
  title     = {Gene ontology analysis of pairwise genetic associations in two genome-wide
               studies of sporadic {ALS}},
  journal   = {BioData Min.},
  volume    = {5},
  pages     = {9},
  year      = {2012},
  url       = {https://doi.org/10.1186/1756-0381-5-9},
  doi       = {10.1186/1756-0381-5-9},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/KimAAFWHRAM12.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LiGWSCT12,
  author    = {Li Li and
               Yang Guo and
               Wenwu Wu and
               Youyi Shi and
               Jian Cheng and
               Shiheng Tao},
  title     = {A comparison and evaluation of five biclustering algorithms by quantifying
               goodness of biclusters for gene expression data},
  journal   = {BioData Min.},
  volume    = {5},
  pages     = {8},
  year      = {2012},
  url       = {https://doi.org/10.1186/1756-0381-5-8},
  doi       = {10.1186/1756-0381-5-8},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LiGWSCT12.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MagdeldinYLMYEZXFYSY12,
  author    = {Sameh Magdeldin and
               Yutaka Yoshida and
               Huiping Li and
               Yoshitaka Maeda and
               Munesuke Yokoyama and
               Shymaa Enany and
               Ying Zhang and
               Bo Xu and
               Hidehiko Fujinaka and
               Eishin Yaoita and
               Sei Sasaki and
               Tadashi Yamamoto},
  title     = {Murine colon proteome and characterization of the protein pathways},
  journal   = {BioData Min.},
  volume    = {5},
  pages     = {11},
  year      = {2012},
  url       = {https://doi.org/10.1186/1756-0381-5-11},
  doi       = {10.1186/1756-0381-5-11},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MagdeldinYLMYEZXFYSY12.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/PendergrassDCR12,
  author    = {Sarah A. Pendergrass and
               Scott M. Dudek and
               Dana C. Crawford and
               Marylyn D. Ritchie},
  title     = {Visually integrating and exploring high throughput Phenome-Wide Association
               Study (PheWAS) results using PheWAS-View},
  journal   = {BioData Min.},
  volume    = {5},
  pages     = {5},
  year      = {2012},
  url       = {https://doi.org/10.1186/1756-0381-5-5},
  doi       = {10.1186/1756-0381-5-5},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/PendergrassDCR12.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Satoh12,
  author    = {Jun{-}ichi Satoh},
  title     = {Molecular network analysis of human microRNA targetome: from cancers
               to Alzheimer's disease},
  journal   = {BioData Min.},
  volume    = {5},
  pages     = {17},
  year      = {2012},
  url       = {https://doi.org/10.1186/1756-0381-5-17},
  doi       = {10.1186/1756-0381-5-17},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Satoh12.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/SoldatosOSBPWSS12,
  author    = {Theodoros G. Soldatos and
               Se{\'{a}}n I. O'Donoghue and
               Venkata P. Satagopam and
               Adriano Barbosa{-}Silva and
               Georgios A. Pavlopoulos and
               Ana Carolina Wanderley{-}Nogueira and
               Nina da Mota Soares{-}Cavalcanti and
               Reinhard Schneider},
  title     = {Caipirini: using gene sets to rank literature},
  journal   = {BioData Min.},
  volume    = {5},
  pages     = {1},
  year      = {2012},
  url       = {https://doi.org/10.1186/1756-0381-5-1},
  doi       = {10.1186/1756-0381-5-1},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/SoldatosOSBPWSS12.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/StokesV12,
  author    = {Matthew E. Stokes and
               Shyam Visweswaran},
  title     = {Application of a spatially-weighted Relief algorithm for ranking genetic
               predictors of disease},
  journal   = {BioData Min.},
  volume    = {5},
  pages     = {20},
  year      = {2012},
  url       = {https://doi.org/10.1186/1756-0381-5-20},
  doi       = {10.1186/1756-0381-5-20},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/StokesV12.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/TuikkalaVSNA12,
  author    = {Johannes Tuikkala and
               Heidi V{\"{a}}h{\"{a}}maa and
               Pekka Salmela and
               Olli Nevalainen and
               Tero Aittokallio},
  title     = {A multilevel layout algorithm for visualizing physical and genetic
               interaction networks, with emphasis on their modular organization},
  journal   = {BioData Min.},
  volume    = {5},
  pages     = {2},
  year      = {2012},
  url       = {https://doi.org/10.1186/1756-0381-5-2},
  doi       = {10.1186/1756-0381-5-2},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/TuikkalaVSNA12.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/TurenneTIYIVDH12,
  author    = {Nicolas Turenne and
               Evgeny S. Tiys and
               Vladimir A. Ivanisenko and
               Nikolay Yudin and
               Elena Ignatieva and
               Damien Valour and
               S{\'{e}}verine A. Degrelle and
               Isabelle Hue},
  title     = {Finding biomarkers in non-model species: literature mining of transcription
               factors involved in bovine embryo development},
  journal   = {BioData Min.},
  volume    = {5},
  pages     = {12},
  year      = {2012},
  url       = {https://doi.org/10.1186/1756-0381-5-12},
  doi       = {10.1186/1756-0381-5-12},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/TurenneTIYIVDH12.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/UrbanowiczKFM12,
  author    = {Ryan J. Urbanowicz and
               Jeff Kiralis and
               Jonathan M. Fisher and
               Jason H. Moore},
  title     = {Predicting the difficulty of pure, strict, epistatic models: metrics
               for simulated model selection},
  journal   = {BioData Min.},
  volume    = {5},
  pages     = {15},
  year      = {2012},
  url       = {https://doi.org/10.1186/1756-0381-5-15},
  doi       = {10.1186/1756-0381-5-15},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/UrbanowiczKFM12.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/UrbanowiczKSHFM12,
  author    = {Ryan J. Urbanowicz and
               Jeff Kiralis and
               Nicholas A. Sinnott{-}Armstrong and
               Tamra Heberling and
               Jonathan M. Fisher and
               Jason H. Moore},
  title     = {{GAMETES:} a fast, direct algorithm for generating pure, strict, epistatic
               models with random architectures},
  journal   = {BioData Min.},
  volume    = {5},
  pages     = {16},
  year      = {2012},
  url       = {https://doi.org/10.1186/1756-0381-5-16},
  doi       = {10.1186/1756-0381-5-16},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/UrbanowiczKSHFM12.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/WirthBB12,
  author    = {Henry Wirth and
               Martin von Bergen and
               Hans Binder},
  title     = {Mining {SOM} expression portraits: feature selection and integrating
               concepts of molecular function},
  journal   = {BioData Min.},
  volume    = {5},
  pages     = {18},
  year      = {2012},
  url       = {https://doi.org/10.1186/1756-0381-5-18},
  doi       = {10.1186/1756-0381-5-18},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/WirthBB12.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/YuGWVWMAS12,
  author    = {Xiaoqing Yu and
               Kishore Guda and
               Joseph Willis and
               Martina Veigl and
               Zhenghe Wang and
               Sanford Markowitz and
               Mark D. Adams and
               Shuying Sun},
  title     = {How do alignment programs perform on sequencing data with varying
               qualities and from repetitive regions?},
  journal   = {BioData Min.},
  volume    = {5},
  pages     = {6},
  year      = {2012},
  url       = {https://doi.org/10.1186/1756-0381-5-6},
  doi       = {10.1186/1756-0381-5-6},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/YuGWVWMAS12.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/CeruttiBGG11,
  author    = {Francesco Cerutti and
               Luigi Bertolotti and
               Tony L. Goldberg and
               Mario Giacobini},
  title     = {Taxon ordering in phylogenetic trees by means of evolutionary algorithms},
  journal   = {BioData Min.},
  volume    = {4},
  pages     = {20},
  year      = {2011},
  url       = {https://doi.org/10.1186/1756-0381-4-20},
  doi       = {10.1186/1756-0381-4-20},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/CeruttiBGG11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ChiraHD11,
  author    = {Camelia Chira and
               Dragos Horvath and
               D. Dumitrescu},
  title     = {Hill-Climbing search and diversification within an evolutionary approach
               to protein structure prediction},
  journal   = {BioData Min.},
  volume    = {4},
  pages     = {23},
  year      = {2011},
  url       = {https://doi.org/10.1186/1756-0381-4-23},
  doi       = {10.1186/1756-0381-4-23},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ChiraHD11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/DybowskiRHPVHH11,
  author    = {Jan Nikolaj Dybowski and
               Mona Riemenschneider and
               Sascha Hauke and
               Martin Pyka and
               Jens Verheyen and
               Daniel Hoffmann and
               Dominik Heider},
  title     = {Improved Bevirimat resistance prediction by combination of structural
               and sequence-based classifiers},
  journal   = {BioData Min.},
  volume    = {4},
  pages     = {26},
  year      = {2011},
  url       = {https://doi.org/10.1186/1756-0381-4-26},
  doi       = {10.1186/1756-0381-4-26},
  timestamp = {Mon, 28 Dec 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/DybowskiRHPVHH11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/EcheverriaFPMP11,
  author    = {Pablo C. Echeverr{\'{\i}}a and
               Fedor Forafonov and
               Deo P. Pandey and
               Guillaume M{\"{u}}hlebach and
               Didier Picard},
  title     = {Detection of changes in gene regulatory patterns, elicited by perturbations
               of the Hsp90 molecular chaperone complex, by visualizing multiple
               experiments with an animation},
  journal   = {BioData Min.},
  volume    = {4},
  pages     = {15},
  year      = {2011},
  url       = {https://doi.org/10.1186/1756-0381-4-15},
  doi       = {10.1186/1756-0381-4-15},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/EcheverriaFPMP11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ErtenBEK11,
  author    = {Sinan Erten and
               G{\"{u}}rkan Bebek and
               Rob M. Ewing and
               Mehmet Koyut{\"{u}}rk},
  title     = {{DADA:} Degree-Aware Algorithms for Network-Based Disease Gene Prioritization},
  journal   = {BioData Min.},
  volume    = {4},
  pages     = {19},
  year      = {2011},
  url       = {https://doi.org/10.1186/1756-0381-4-19},
  doi       = {10.1186/1756-0381-4-19},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ErtenBEK11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/GradyTR11,
  author    = {Benjamin J. Grady and
               Eric Torstenson and
               Marylyn D. Ritchie},
  title     = {The effects of linkage disequilibrium in large scale {SNP} datasets
               for {MDR}},
  journal   = {BioData Min.},
  volume    = {4},
  pages     = {11},
  year      = {2011},
  url       = {https://doi.org/10.1186/1756-0381-4-11},
  doi       = {10.1186/1756-0381-4-11},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/GradyTR11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/GraysonA11,
  author    = {Britney L. Grayson and
               Thomas M. Aune},
  title     = {A comparison of genomic copy number calls by Partek Genomics Suite,
               Genotyping Console and Birdsuite algorithms to quantitative {PCR}},
  journal   = {BioData Min.},
  volume    = {4},
  pages     = {8},
  year      = {2011},
  url       = {https://doi.org/10.1186/1756-0381-4-8},
  doi       = {10.1186/1756-0381-4-8},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/GraysonA11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/HeiderH11,
  author    = {Dominik Heider and
               Daniel Hoffmann},
  title     = {Interpol: An {R} package for preprocessing of protein sequences},
  journal   = {BioData Min.},
  volume    = {4},
  pages     = {16},
  year      = {2011},
  url       = {https://doi.org/10.1186/1756-0381-4-16},
  doi       = {10.1186/1756-0381-4-16},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/HeiderH11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/HimmelsteinGM11,
  author    = {Daniel S. Himmelstein and
               Casey S. Greene and
               Jason H. Moore},
  title     = {Evolving hard problems: Generating human genetics datasets with a
               complex etiology},
  journal   = {BioData Min.},
  volume    = {4},
  pages     = {21},
  year      = {2011},
  url       = {https://doi.org/10.1186/1756-0381-4-21},
  doi       = {10.1186/1756-0381-4-21},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/HimmelsteinGM11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/KilpinenOK11,
  author    = {Sami Kilpinen and
               Kalle A. Ojala and
               Olli{-}P. Kallioniemi},
  title     = {Alignment of gene expression profiles from test samples against a
               reference database: New method for context-specific interpretation
               of microarray data},
  journal   = {BioData Min.},
  volume    = {4},
  pages     = {5},
  year      = {2011},
  url       = {https://doi.org/10.1186/1756-0381-4-5},
  doi       = {10.1186/1756-0381-4-5},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/KilpinenOK11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LehrYZJR11,
  author    = {Thorsten Lehr and
               Jing Yuan and
               Dirk Zeumer and
               Supriya Jayadev and
               Marylyn D. Ritchie},
  title     = {Rule based classifier for the analysis of gene-gene and gene-environment
               interactions in genetic association studies},
  journal   = {BioData Min.},
  volume    = {4},
  pages     = {4},
  year      = {2011},
  url       = {https://doi.org/10.1186/1756-0381-4-4},
  doi       = {10.1186/1756-0381-4-4},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LehrYZJR11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MartinTBN11,
  author    = {Christian W. Martin and
               Anika Tauchen and
               Anke Becker and
               Tim W. Nattkemper},
  title     = {A Normalized Tree Index for identification of correlated clinical
               parameters in microarray experiments},
  journal   = {BioData Min.},
  volume    = {4},
  pages     = {2},
  year      = {2011},
  url       = {https://doi.org/10.1186/1756-0381-4-2},
  doi       = {10.1186/1756-0381-4-2},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MartinTBN11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/NepomucenoLA11,
  author    = {Juan A. Nepomuceno and
               Alicia Troncoso Lora and
               Jes{\'{u}}s S. Aguilar{-}Ruiz},
  title     = {Biclustering of Gene Expression Data by Correlation-Based Scatter
               Search},
  journal   = {BioData Min.},
  volume    = {4},
  pages     = {3},
  year      = {2011},
  url       = {https://doi.org/10.1186/1756-0381-4-3},
  doi       = {10.1186/1756-0381-4-3},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/NepomucenoLA11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Nicolas11,
  author    = {Guillaume G. Nicolas},
  title     = {Detection of putative new mutacins by bioinformatic analysis using
               available web tools},
  journal   = {BioData Min.},
  volume    = {4},
  pages     = {22},
  year      = {2011},
  url       = {https://doi.org/10.1186/1756-0381-4-22},
  doi       = {10.1186/1756-0381-4-22},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Nicolas11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/PavlopoulosSMSKASB11,
  author    = {Georgios A. Pavlopoulos and
               Maria Secrier and
               Charalampos N. Moschopoulos and
               Theodoros G. Soldatos and
               Sophia Kossida and
               Jan Aerts and
               Reinhard Schneider and
               Pantelis G. Bagos},
  title     = {Using graph theory to analyze biological networks},
  journal   = {BioData Min.},
  volume    = {4},
  pages     = {10},
  year      = {2011},
  url       = {https://doi.org/10.1186/1756-0381-4-10},
  doi       = {10.1186/1756-0381-4-10},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/PavlopoulosSMSKASB11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/SatohT11,
  author    = {Jun{-}ichi Satoh and
               Hiroko Tabunoki},
  title     = {Comprehensive analysis of human microRNA target networks},
  journal   = {BioData Min.},
  volume    = {4},
  pages     = {17},
  year      = {2011},
  url       = {https://doi.org/10.1186/1756-0381-4-17},
  doi       = {10.1186/1756-0381-4-17},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/SatohT11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/SchillingCS11,
  author    = {Ruben Schilling and
               Ivan G. Costa and
               Alexander Schliep},
  title     = {pGQL: {A} probabilistic graphical query language for gene expression
               time courses},
  journal   = {BioData Min.},
  volume    = {4},
  pages     = {9},
  year      = {2011},
  url       = {https://doi.org/10.1186/1756-0381-4-9},
  doi       = {10.1186/1756-0381-4-9},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/SchillingCS11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/SunHYHL11,
  author    = {Shuying Sun and
               Yi{-}Wen Huang and
               Pearlly Yan and
               Tim Hui{-}Ming Huang and
               Shili Lin},
  title     = {Preprocessing differential methylation hybridization microarray data},
  journal   = {BioData Min.},
  volume    = {4},
  pages     = {13},
  year      = {2011},
  url       = {https://doi.org/10.1186/1756-0381-4-13},
  doi       = {10.1186/1756-0381-4-13},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/SunHYHL11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/UrbachM11,
  author    = {Davnah Urbach and
               Jason H. Moore},
  title     = {The spatial dimension in biological data mining},
  journal   = {BioData Min.},
  volume    = {4},
  pages     = {6},
  year      = {2011},
  url       = {https://doi.org/10.1186/1756-0381-4-6},
  doi       = {10.1186/1756-0381-4-6},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/UrbachM11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/UrbachM11a,
  author    = {Davnah Urbach and
               Jason H. Moore},
  title     = {Data mining and the evolution of biological complexity},
  journal   = {BioData Min.},
  volume    = {4},
  pages     = {7},
  year      = {2011},
  url       = {https://doi.org/10.1186/1756-0381-4-7},
  doi       = {10.1186/1756-0381-4-7},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/UrbachM11a.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/UrbachM11b,
  author    = {Davnah Urbach and
               Jason H. Moore},
  title     = {Mining beyond the exome},
  journal   = {BioData Min.},
  volume    = {4},
  pages     = {14},
  year      = {2011},
  url       = {https://doi.org/10.1186/1756-0381-4-14},
  doi       = {10.1186/1756-0381-4-14},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/UrbachM11b.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/UrbachM11c,
  author    = {Davnah Urbach and
               Jason H. Moore},
  title     = {Mining the diseasome},
  journal   = {BioData Min.},
  volume    = {4},
  pages     = {25},
  year      = {2011},
  url       = {https://doi.org/10.1186/1756-0381-4-25},
  doi       = {10.1186/1756-0381-4-25},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/UrbachM11c.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/VanneschiFMAPG11,
  author    = {Leonardo Vanneschi and
               Antonella Farinaccio and
               Giancarlo Mauri and
               Marco Antoniotti and
               Paolo Provero and
               Mario Giacobini},
  title     = {A comparison of machine learning techniques for survival prediction
               in breast cancer},
  journal   = {BioData Min.},
  volume    = {4},
  pages     = {12},
  year      = {2011},
  url       = {https://doi.org/10.1186/1756-0381-4-12},
  doi       = {10.1186/1756-0381-4-12},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/VanneschiFMAPG11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/VassuraLMMAFC11,
  author    = {Marco Vassura and
               Pietro di Lena and
               Luciano Margara and
               Maria Mirto and
               Giovanni Aloisio and
               Piero Fariselli and
               Rita Casadio},
  title     = {Blurring contact maps of thousands of proteins: what we can learn
               by reconstructing 3D structure},
  journal   = {BioData Min.},
  volume    = {4},
  pages     = {1},
  year      = {2011},
  url       = {https://doi.org/10.1186/1756-0381-4-1},
  doi       = {10.1186/1756-0381-4-1},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/VassuraLMMAFC11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/WinhamM11,
  author    = {Stacey J. Winham and
               Alison A. Motsinger{-}Reif},
  title     = {An {R} package implementation of multifactor dimensionality reduction},
  journal   = {BioData Min.},
  volume    = {4},
  pages     = {24},
  year      = {2011},
  url       = {https://doi.org/10.1186/1756-0381-4-24},
  doi       = {10.1186/1756-0381-4-24},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/WinhamM11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ZhengJHZGCZL11,
  author    = {Guang Zheng and
               Miao Jiang and
               Xiaojuan He and
               Jing Zhao and
               Hongtao Guo and
               Gao Chen and
               Qinglin Zha and
               Aiping Lu},
  title     = {Discrete derivative: a data slicing algorithm for exploration of sharing
               biological networks between rheumatoid arthritis and coronary heart
               disease},
  journal   = {BioData Min.},
  volume    = {4},
  pages     = {18},
  year      = {2011},
  url       = {https://doi.org/10.1186/1756-0381-4-18},
  doi       = {10.1186/1756-0381-4-18},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ZhengJHZGCZL11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/DuanPSZN10,
  author    = {Fenghai Duan and
               Mark A. Pauley and
               Eliot R. Spindel and
               Li Zhang and
               Robert B. Norgren},
  title     = {Large scale analysis of positional effects of single-base mismatches
               on microarray gene expression data},
  journal   = {BioData Min.},
  volume    = {3},
  pages     = {2},
  year      = {2010},
  url       = {https://doi.org/10.1186/1756-0381-3-2},
  doi       = {10.1186/1756-0381-3-2},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/DuanPSZN10.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/EnrothAWK10,
  author    = {Stefan Enroth and
               Robin Andersson and
               Claes Wadelius and
               Jan Komorowski},
  title     = {{SICTIN:} Rapid footprinting of massively parallel sequencing data},
  journal   = {BioData Min.},
  volume    = {3},
  pages     = {4},
  year      = {2010},
  url       = {https://doi.org/10.1186/1756-0381-3-4},
  doi       = {10.1186/1756-0381-3-4},
  timestamp = {Thu, 21 Jan 2021 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/EnrothAWK10.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/LeiR10,
  author    = {Chengwei Lei and
               Jianhua Ruan},
  title     = {A particle swarm optimization-based algorithm for finding gapped motifs},
  journal   = {BioData Min.},
  volume    = {3},
  pages     = {9},
  year      = {2010},
  url       = {https://doi.org/10.1186/1756-0381-3-9},
  doi       = {10.1186/1756-0381-3-9},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/LeiR10.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MisawaK10,
  author    = {Kazuharu Misawa and
               Reiko F. Kikuno},
  title     = {GeneWaltz-A new method for reducing the false positives of gene finding},
  journal   = {BioData Min.},
  volume    = {3},
  pages     = {6},
  year      = {2010},
  url       = {https://doi.org/10.1186/1756-0381-3-6},
  doi       = {10.1186/1756-0381-3-6},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MisawaK10.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Motsinger-ReifDWH10,
  author    = {Alison A. Motsinger{-}Reif and
               Sushamna Deodhar and
               Stacey J. Winham and
               Nicholas E. Hardison},
  title     = {Grammatical evolution decision trees for detecting gene-gene interactions},
  journal   = {BioData Min.},
  volume    = {3},
  pages     = {8},
  year      = {2010},
  url       = {https://doi.org/10.1186/1756-0381-3-8},
  doi       = {10.1186/1756-0381-3-8},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Motsinger-ReifDWH10.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/NelsonASMWG10,
  author    = {Rex T. Nelson and
               Shulamit Avraham and
               Randy C. Shoemaker and
               Gregory D. May and
               Doreen Ware and
               Damian Gessler},
  title     = {Applications and methods utilizing the Simple Semantic Web Architecture
               and Protocol {(SSWAP)} for bioinformatics resource discovery and disparate
               data and service integration},
  journal   = {BioData Min.},
  volume    = {3},
  pages     = {3},
  year      = {2010},
  url       = {https://doi.org/10.1186/1756-0381-3-3},
  doi       = {10.1186/1756-0381-3-3},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/NelsonASMWG10.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/PavlopoulosSBS10,
  author    = {Georgios A. Pavlopoulos and
               Theodoros G. Soldatos and
               Adriano Barbosa{-}Silva and
               Reinhard Schneider},
  title     = {A reference guide for tree analysis and visualization},
  journal   = {BioData Min.},
  volume    = {3},
  pages     = {1},
  year      = {2010},
  url       = {https://doi.org/10.1186/1756-0381-3-1},
  doi       = {10.1186/1756-0381-3-1},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/PavlopoulosSBS10.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/PendergrassDCR10,
  author    = {Sarah A. Pendergrass and
               Scott M. Dudek and
               Dana C. Crawford and
               Marylyn D. Ritchie},
  title     = {Synthesis-View: visualization and interpretation of {SNP} association
               results for multi-cohort, multi-phenotype data and meta-analysis},
  journal   = {BioData Min.},
  volume    = {3},
  pages     = {10},
  year      = {2010},
  url       = {https://doi.org/10.1186/1756-0381-3-10},
  doi       = {10.1186/1756-0381-3-10},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/PendergrassDCR10.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/RollinsT10,
  author    = {Derrick K. Rollins and
               AiLing Teh},
  title     = {An extended data mining method for identifying differentially expressed
               assay-specific signatures in functional genomic studies},
  journal   = {BioData Min.},
  volume    = {3},
  pages     = {11},
  year      = {2010},
  url       = {https://doi.org/10.1186/1756-0381-3-11},
  doi       = {10.1186/1756-0381-3-11},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/RollinsT10.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Sharma10,
  author    = {Abhay Sharma},
  title     = {Transcriptome bioinformatic analysis identifies potential therapeutic
               mechanism of pentylenetetrazole in down syndrome},
  journal   = {BioData Min.},
  volume    = {3},
  pages     = {7},
  year      = {2010},
  url       = {https://doi.org/10.1186/1756-0381-3-7},
  doi       = {10.1186/1756-0381-3-7},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Sharma10.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/TurnerDR10,
  author    = {Stephen D. Turner and
               Scott M. Dudek and
               Marylyn D. Ritchie},
  title     = {{ATHENA:} {A} knowledge-based hybrid backpropagation-grammatical evolution
               neural network algorithm for discovering epistasis among quantitative
               trait Loci},
  journal   = {BioData Min.},
  volume    = {3},
  pages     = {5},
  year      = {2010},
  url       = {https://doi.org/10.1186/1756-0381-3-5},
  doi       = {10.1186/1756-0381-3-5},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/TurnerDR10.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ArehartGWHM09,
  author    = {Eric Arehart and
               Scott Gleim and
               Bill C. White and
               John Hwa and
               Jason H. Moore},
  title     = {Multifactor dimensionality reduction analysis identifies specific
               nucleotide patterns promoting genetic polymorphisms},
  journal   = {BioData Min.},
  volume    = {2},
  year      = {2009},
  url       = {https://doi.org/10.1186/1756-0381-2-2},
  doi       = {10.1186/1756-0381-2-2},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ArehartGWHM09.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/AyadiEH09,
  author    = {Wassim Ayadi and
               Mourad Elloumi and
               Jin{-}Kao Hao},
  title     = {A biclustering algorithm based on a Bicluster Enumeration Tree: application
               to {DNA} microarray data},
  journal   = {BioData Min.},
  volume    = {2},
  pages     = {9},
  year      = {2009},
  url       = {https://doi.org/10.1186/1756-0381-2-9},
  doi       = {10.1186/1756-0381-2-9},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/AyadiEH09.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/BayeTAG09,
  author    = {Tesfaye M. Baye and
               Hemant K. Tiwari and
               David B. Allison and
               Rodney C. Go},
  title     = {Database mining for selection of {SNP} markers useful in admixture
               mapping},
  journal   = {BioData Min.},
  volume    = {2},
  year      = {2009},
  url       = {https://doi.org/10.1186/1756-0381-2-1},
  doi       = {10.1186/1756-0381-2-1},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/BayeTAG09.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/BushCTR09,
  author    = {William S. Bush and
               Guanhua Chen and
               Eric Torstenson and
               Marylyn D. Ritchie},
  title     = {LD-Spline: Mapping SNPs on genotyping platforms to genomic regions
               using patterns of linkage disequilibrium},
  journal   = {BioData Min.},
  volume    = {2},
  pages     = {7},
  year      = {2009},
  url       = {https://doi.org/10.1186/1756-0381-2-7},
  doi       = {10.1186/1756-0381-2-7},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/BushCTR09.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/FayechEL09,
  author    = {Sondes Fayech and
               Nadia Essoussi and
               Mohamed Limam},
  title     = {Partitioning clustering algorithms for protein sequence data sets},
  journal   = {BioData Min.},
  volume    = {2},
  year      = {2009},
  url       = {https://doi.org/10.1186/1756-0381-2-3},
  doi       = {10.1186/1756-0381-2-3},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/FayechEL09.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/GreenePKM09,
  author    = {Casey S. Greene and
               Nadia M. Penrod and
               Jeff Kiralis and
               Jason H. Moore},
  title     = {Spatially Uniform ReliefF {(SURF)} for computationally-efficient filtering
               of gene-gene interactions},
  journal   = {BioData Min.},
  volume    = {2},
  pages     = {5},
  year      = {2009},
  url       = {https://doi.org/10.1186/1756-0381-2-5},
  doi       = {10.1186/1756-0381-2-5},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/GreenePKM09.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Likic09,
  author    = {Vladimir A. Likic},
  title     = {Extraction of pure components from overlapped signals in gas chromatography-mass
               spectrometry {(GC-MS)}},
  journal   = {BioData Min.},
  volume    = {2},
  pages     = {6},
  year      = {2009},
  url       = {https://doi.org/10.1186/1756-0381-2-6},
  doi       = {10.1186/1756-0381-2-6},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Likic09.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Schulz-TrieglaffMRSTU09,
  author    = {Ole Schulz{-}Trieglaff and
               Egidijus Machtejevas and
               Knut Reinert and
               Hartmut Schl{\"{u}}ter and
               Joachim Thiemann and
               Klaus Unger},
  title     = {Statistical quality assessment and outlier detection for liquid chromatography-mass
               spectrometry experiments},
  journal   = {BioData Min.},
  volume    = {2},
  year      = {2009},
  url       = {https://doi.org/10.1186/1756-0381-2-4},
  doi       = {10.1186/1756-0381-2-4},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Schulz-TrieglaffMRSTU09.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ShameerNGS09,
  author    = {Khader Shameer and
               Paramasivam Nagarajan and
               Kumar Gaurav and
               Ramanathan Sowdhamini},
  title     = {3PFDB - {A} database of Best Representative {PSSM} Profiles (BRPs)
               of Protein Families generated using a novel data mining approach},
  journal   = {BioData Min.},
  volume    = {2},
  pages     = {8},
  year      = {2009},
  url       = {https://doi.org/10.1186/1756-0381-2-8},
  doi       = {10.1186/1756-0381-2-8},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ShameerNGS09.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Aguilar-RuizMR08,
  author    = {Jes{\'{u}}s S. Aguilar{-}Ruiz and
               Jason H. Moore and
               Marylyn D. Ritchie},
  title     = {Filling the gap between biology and computer science},
  journal   = {BioData Min.},
  volume    = {1},
  year      = {2008},
  url       = {https://doi.org/10.1186/1756-0381-1-1},
  doi       = {10.1186/1756-0381-1-1},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Aguilar-RuizMR08.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/AritaS08,
  author    = {Masanori Arita and
               Kazuhiro Suwa},
  title     = {Search extension transforms Wiki into a relational system: {A} case
               for flavonoid metabolite database},
  journal   = {BioData Min.},
  volume    = {1},
  year      = {2008},
  url       = {https://doi.org/10.1186/1756-0381-1-7},
  doi       = {10.1186/1756-0381-1-7},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/AritaS08.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ArmananzasISSFLPBRBL08,
  author    = {Rub{\'{e}}n Arma{\~{n}}anzas and
               I{\~{n}}aki Inza and
               Roberto Santana and
               Yvan Saeys and
               Jose Luis Flores and
               Jos{\'{e}} Antonio Lozano and
               Yves Van de Peer and
               Rosa Blanco and
               V{\'{\i}}ctor Robles and
               Concha Bielza and
               Pedro Larra{\~{n}}aga},
  title     = {A review of estimation of distribution algorithms in bioinformatics},
  journal   = {BioData Min.},
  volume    = {1},
  year      = {2008},
  url       = {https://doi.org/10.1186/1756-0381-1-6},
  doi       = {10.1186/1756-0381-1-6},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ArmananzasISSFLPBRBL08.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/KullV08,
  author    = {Meelis Kull and
               Jaak Vilo},
  title     = {Fast approximate hierarchical clustering using similarity heuristics},
  journal   = {BioData Min.},
  volume    = {1},
  year      = {2008},
  url       = {https://doi.org/10.1186/1756-0381-1-9},
  doi       = {10.1186/1756-0381-1-9},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/KullV08.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/KumarasamyWVK08,
  author    = {Saravana K. Kumarasamy and
               Yunshi Wang and
               Vignesh Viswanathan and
               Rachel S. Kraut},
  title     = {Multivariate profiling of neurodegeneration-associated changes in
               a subcellular compartment of neurons via image processing},
  journal   = {BioData Min.},
  volume    = {1},
  year      = {2008},
  url       = {https://doi.org/10.1186/1756-0381-1-10},
  doi       = {10.1186/1756-0381-1-10},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/KumarasamyWVK08.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MaCSBKKN08,
  author    = {Qicheng Ma and
               Gung{-}Wei Chirn and
               Joseph D. Szustakowski and
               Adel Bakhtiarova and
               Penelope A. Kosinski and
               Daniel M. Kemp and
               Nanguneri Nirmala},
  title     = {Uncovering mechanisms of transcriptional regulations by systematic
               mining of cis regulatory elements with gene expression profiles},
  journal   = {BioData Min.},
  volume    = {1},
  year      = {2008},
  url       = {https://doi.org/10.1186/1756-0381-1-4},
  doi       = {10.1186/1756-0381-1-4},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/MaCSBKKN08.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/McEachinKSM08,
  author    = {Richard C. McEachin and
               Benjamin J. Keller and
               Erika F. H. Saunders and
               Melvin G. McInnis},
  title     = {Modeling gene-by-environment interaction in comorbid depression with
               alcohol use disorders via an integrated bioinformatics approach},
  journal   = {BioData Min.},
  volume    = {1},
  year      = {2008},
  url       = {https://doi.org/10.1186/1756-0381-1-2},
  doi       = {10.1186/1756-0381-1-2},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/McEachinKSM08.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/Motsinger-ReifR08,
  author    = {Alison A. Motsinger{-}Reif and
               Marylyn D. Ritchie},
  title     = {Neural networks for genetic epidemiology: past, present, and future},
  journal   = {BioData Min.},
  volume    = {1},
  year      = {2008},
  url       = {https://doi.org/10.1186/1756-0381-1-3},
  doi       = {10.1186/1756-0381-1-3},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/Motsinger-ReifR08.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/OvaskaLH08,
  author    = {Kristian Ovaska and
               Marko Laakso and
               Sampsa Hautaniemi},
  title     = {Fast Gene Ontology based clustering for microarray experiments},
  journal   = {BioData Min.},
  volume    = {1},
  year      = {2008},
  url       = {https://doi.org/10.1186/1756-0381-1-11},
  doi       = {10.1186/1756-0381-1-11},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/OvaskaLH08.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/PavlopoulosWS08,
  author    = {Georgios A. Pavlopoulos and
               Anna{-}Lynn Wegener and
               Reinhard Schneider},
  title     = {A survey of visualization tools for biological network analysis},
  journal   = {BioData Min.},
  volume    = {1},
  year      = {2008},
  url       = {https://doi.org/10.1186/1756-0381-1-12},
  doi       = {10.1186/1756-0381-1-12},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/PavlopoulosWS08.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/ReverterID08,
  author    = {Antonio Reverter and
               Aaron Ingham and
               Brian P. Dalrymple},
  title     = {Mining tissue specificity, gene connectivity and disease association
               to reveal a set of genes that modify the action of disease causing
               genes},
  journal   = {BioData Min.},
  volume    = {1},
  year      = {2008},
  url       = {https://doi.org/10.1186/1756-0381-1-8},
  doi       = {10.1186/1756-0381-1-8},
  timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/biodatamining/ReverterID08.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/WangZA08,
  author    = {Haiying Wang and
               Huiru Zheng and
               Francisco Azuaje},
  title     = {Clustering-based approaches to {SAGE} data mining},
  journal   = {BioData Min.},
  volume    = {1},
  year      = {2008},
  url       = {https://doi.org/10.1186/1756-0381-1-5},
  doi       = {10.1186/1756-0381-1-5},
  timestamp = {Wed, 04 Nov 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/biodatamining/WangZA08.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
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