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@inproceedings{DBLP:conf/recomb/AerniE06,
author = {Sarah J. Aerni and
Eleazar Eskin},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {10 Years of the International Conference on Research in Computational
Molecular Biology {(RECOMB)}},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {546--562},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_45},
doi = {10.1007/11732990\_45},
timestamp = {Mon, 13 May 2019 09:30:09 +0200},
biburl = {https://dblp.org/rec/conf/recomb/AerniE06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/AlkanKSUEZB06,
author = {Can Alkan and
Emre Karako{\c{c}} and
S{\"{u}}leyman Cenk Sahinalp and
Peter J. Unrau and
H. Alexander Ebhardt and
Kaizhong Zhang and
Jeremy Buhler},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {{RNA} Secondary Structure Prediction Via Energy Density Minimization},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {130--142},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_12},
doi = {10.1007/11732990\_12},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/recomb/AlkanKSUEZB06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/AnderssonL06,
author = {Samuel A. Andersson and
Jens Lagergren},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Motif Yggdrasil: Sampling from a Tree Mixture Model},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {458--472},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_39},
doi = {10.1007/11732990\_39},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/AnderssonL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/AngelovHKKK06,
author = {Stanislav Angelov and
Boulos Harb and
Sampath Kannan and
Sanjeev Khanna and
Junhyong Kim},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Efficient Enumeration of Phylogenetically Informative Substrings},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {248--264},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_22},
doi = {10.1007/11732990\_22},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/AngelovHKKK06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/BaderO06,
author = {Martin Bader and
Enno Ohlebusch},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Sorting by Weighted Reversals, Transpositions, and Inverted Transpositions},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {563--577},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_46},
doi = {10.1007/11732990\_46},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/BaderO06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/BandeiraTFP06,
author = {Nuno Bandeira and
Dekel Tsur and
Ari Frank and
Pavel A. Pevzner},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {A New Approach to Protein Identification},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {363--378},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_31},
doi = {10.1007/11732990\_31},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/BandeiraTFP06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/CameronBW06,
author = {Michael Cameron and
Yaniv Bernstein and
Hugh E. Williams},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Clustering Near-Identical Sequences for Fast Homology Search},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {175--189},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_16},
doi = {10.1007/11732990\_16},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/CameronBW06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/ChenFBDKLKLK06,
author = {Brian Y. Chen and
Viacheslav Fofanov and
Drew H. Bryant and
Bradley D. Dodson and
David M. Kristensen and
Andreas Martin Lisewski and
Marek Kimmel and
Olivier Lichtarge and
Lydia E. Kavraki},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Geometric Sieving: Automated Distributed Optimization of 3D Motifs
for Protein Function Prediction},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {500--515},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_42},
doi = {10.1007/11732990\_42},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/ChenFBDKLKLK06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/ChennubhotlaB06,
author = {Chakra Chennubhotla and
Ivet Bahar},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Markov Methods for Hierarchical Coarse-Graining of Large Protein Dynamics},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {379--393},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_32},
doi = {10.1007/11732990\_32},
timestamp = {Fri, 20 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/recomb/ChennubhotlaB06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/ChiangABHL06,
author = {Tsung{-}Han Chiang and
Mehmet Serkan Apaydin and
Douglas L. Brutlag and
David Hsu and
Jean{-}Claude Latombe},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Predicting Experimental Quantities in Protein Folding Kinetics Using
Stochastic Roadmap Simulation},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {410--424},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_34},
doi = {10.1007/11732990\_34},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/ChiangABHL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/ChorT06,
author = {Benny Chor and
Tamir Tuller},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Biological Networks: Comparison, Conservation, and Evolutionary Trees},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {30--44},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_3},
doi = {10.1007/11732990\_3},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/ChorT06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/CsurosM06,
author = {Mikl{\'{o}}s Cs{\"{u}}r{\"{o}}s and
Istv{\'{a}}n Mikl{\'{o}}s},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {A Probabilistic Model for Gene Content Evolution with Duplication,
Loss, and Horizontal Transfer},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {206--220},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_18},
doi = {10.1007/11732990\_18},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/CsurosM06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/DarotYH06,
author = {Jeremy Darot and
Chen{-}Hsiang Yeang and
David Haussler},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Detecting the Dependent Evolution of Biosequences},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {595--609},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_48},
doi = {10.1007/11732990\_48},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/DarotYH06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/DaskalakisHJMMR06,
author = {Constantinos Daskalakis and
Cameron Hill and
Alexander Jaffe and
Radu Mihaescu and
Elchanan Mossel and
Satish Rao},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Maximal Accurate Forests from Distance Matrices},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {281--295},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_24},
doi = {10.1007/11732990\_24},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/DaskalakisHJMMR06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/DoGB06,
author = {Chuong B. Do and
Samuel S. Gross and
Serafim Batzoglou},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {CONTRAlign: Discriminative Training for Protein Sequence Alignment},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {160--174},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_15},
doi = {10.1007/11732990\_15},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/DoGB06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/DostHZB06,
author = {Banu Dost and
Buhm Han and
Shaojie Zhang and
Vineet Bafna},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Structural Alignment of Pseudoknotted {RNA}},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {143--158},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_13},
doi = {10.1007/11732990\_13},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/DostHZB06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/FuCVNZJ06,
author = {Zheng Fu and
Xin Chen and
Vladimir Vacic and
Peng Nan and
Yang Zhong and
Tao Jiang},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {A Parsimony Approach to Genome-Wide Ortholog Assignment},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {578--594},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_47},
doi = {10.1007/11732990\_47},
timestamp = {Wed, 22 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/recomb/FuCVNZJ06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/Gavin06,
author = {Anne{-}Claude Gavin},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Global Interaction Networks Probed by Mass Spectrometry},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {83--83},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_7},
doi = {10.1007/11732990\_7},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/Gavin06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/GeorgievLD06,
author = {Ivelin Georgiev and
Ryan H. Lilien and
Bruce Randall Donald},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {A Novel Minimized Dead-End Elimination Criterion and Its Application
to Protein Redesign in a Hybrid Scoring and Search Algorithm for Computing
Partition Functions over Molecular Ensembles},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {530--545},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_44},
doi = {10.1007/11732990\_44},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/GeorgievLD06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/GrossmannBRV06,
author = {Steffen Grossmann and
Sebastian Bauer and
Peter N. Robinson and
Martin Vingron},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {An Improved Statistic for Detecting Over-Represented Gene Ontology
Annotations in Gene Sets},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {85--98},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_9},
doi = {10.1007/11732990\_9},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/GrossmannBRV06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/Haussler06,
author = {David Haussler},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Ultraconserved Elements, Living Fossil Transposons, and Rapid Bursts
of Change: Reconstructing the Uneven Evolutionary History of the Human
Genome},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {336--337},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_28},
doi = {10.1007/11732990\_28},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/Haussler06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/HeckermanKL06,
author = {David Heckerman and
Carl Myers Kadie and
Jennifer Listgarten},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Leveraging Information Across {HLA} Alleles/Supertypes Improves Epitope
Prediction},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {296--308},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_25},
doi = {10.1007/11732990\_25},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/HeckermanKL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/HuangMF06,
author = {Jim C. Huang and
Quaid Morris and
Brendan J. Frey},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Detecting MicroRNA Targets by Linking Sequence, MicroRNA and Gene
Expression Data},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {114--129},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_11},
doi = {10.1007/11732990\_11},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/HuangMF06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/KaminskiB06,
author = {Naftali Kaminski and
Ziv Bar{-}Joseph},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {A Patient-Gene Model for Temporal Expression Profiles in Clinical
Studies},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {69--82},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_6},
doi = {10.1007/11732990\_6},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/KaminskiB06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/KececiogluK06,
author = {John D. Kececioglu and
Eagu Kim},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Simple and Fast Inverse Alignment},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {441--455},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_37},
doi = {10.1007/11732990\_37},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/KececiogluK06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/KoyuturkGS06,
author = {Mehmet Koyut{\"{u}}rk and
Ananth Grama and
Wojciech Szpankowski},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Assessing Significance of Connectivity and Conservation in Protein
Interaction Networks},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {45--59},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_4},
doi = {10.1007/11732990\_4},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/KoyuturkGS06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/MenchettiPFAR06,
author = {Sauro Menchetti and
Andrea Passerini and
Paolo Frasconi and
Claudia Andreini and
Antonio Rosato},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Improving Prediction of Zinc Binding Sites by Modeling the Linkage
Between Residues Close in Sequence},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {309--320},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_26},
doi = {10.1007/11732990\_26},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/MenchettiPFAR06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/MesserBVA06,
author = {Philipp W. Messer and
Ralf Bundschuh and
Martin Vingron and
Peter F. Arndt},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Alignment Statistics for Long-Range Correlated Genomic Sequences},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {426--440},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_36},
doi = {10.1007/11732990\_36},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/MesserBVA06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/PattengaleM06,
author = {Nicholas D. Pattengale and
Bernard M. E. Moret},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {A Sublinear-Time Randomized Approximation Scheme for the Robinson-Foulds
Metric},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {221--230},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_19},
doi = {10.1007/11732990\_19},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/PattengaleM06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/Przytycka06,
author = {Teresa M. Przytycka},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {An Important Connection Between Network Motifs and Parsimony Models},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {321--335},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_27},
doi = {10.1007/11732990\_27},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/Przytycka06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/RoyyuruAPSPRB06,
author = {Ajay K. Royyuru and
Gabriela Alexe and
Daniel E. Platt and
Ravi Vijaya Satya and
Laxmi Parida and
Saharon Rosset and
Gyan Bhanot},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Inferring Common Origins from mtDNA},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {246--247},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_21},
doi = {10.1007/11732990\_21},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/RoyyuruAPSPRB06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/Sankoff06,
author = {David Sankoff},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Statistical Evaluation of Genome Rearrangement},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {84--84},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_8},
doi = {10.1007/11732990\_8},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/Sankoff06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/ScheidS06,
author = {Stefanie Scheid and
Rainer Spang},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Permutation Filtering: {A} Novel Concept for Significance Analysis
of Large-Scale Genomic Data},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {338--347},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_29},
doi = {10.1007/11732990\_29},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/ScheidS06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/SiepelPH06,
author = {Adam C. Siepel and
Katherine S. Pollard and
David Haussler},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {New Methods for Detecting Lineage-Specific Selection},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {190--205},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_17},
doi = {10.1007/11732990\_17},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/SiepelPH06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/SnirP06,
author = {Sagi Snir and
Lior Pachter},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Phylogenetic Profiling of Insertions and Deletions in Vertebrate Genomes},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {265--280},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_23},
doi = {10.1007/11732990\_23},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/SnirP06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/SongDGLW06,
author = {Yun S. Song and
Zhihong Ding and
Dan Gusfield and
Charles H. Langley and
Yufeng Wu},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Algorithms to Distinguish the Role of Gene-Conversion from Single-Crossover
Recombination in the Derivation of {SNP} Sequences in Populations},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {231--245},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_20},
doi = {10.1007/11732990\_20},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/SongDGLW06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/SrinivasanNFBM06,
author = {Balaji S. Srinivasan and
Antal F. Novak and
Jason Flannick and
Serafim Batzoglou and
Harley H. McAdams},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Integrated Protein Interaction Networks for 11 Microbes},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {1--14},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_1},
doi = {10.1007/11732990\_1},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/SrinivasanNFBM06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/ThomasTTA06,
author = {Shawna L. Thomas and
Xinyu Tang and
Lydia Tapia and
Nancy M. Amato},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Simulating Protein Motions with Rigidity Analysis},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {394--409},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_33},
doi = {10.1007/11732990\_33},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/ThomasTTA06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/VashistKM06,
author = {Akshay Vashist and
Casimir A. Kulikowski and
Ilya B. Muchnik},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Protein Function Annotation Based on Ortholog Clusters Extracted from
Incomplete Genomes Using Combinatorial Optimization},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {99--113},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_10},
doi = {10.1007/11732990\_10},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/VashistKM06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/WangNBMC06,
author = {Kai Wang and
Ilya Nemenman and
Nilanjana Banerjee and
Adam A. Margolin and
Andrea Califano},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Genome-Wide Discovery of Modulators of Transcriptional Interactions
in Human {B} Lymphocytes},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {348--362},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_30},
doi = {10.1007/11732990\_30},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/recomb/WangNBMC06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/WangRS06,
author = {Ling Wang and
Marco Ramoni and
Paola Sebastiani},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Clustering Short Gene Expression Profiles},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {60--68},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_5},
doi = {10.1007/11732990\_5},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/WangRS06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/Waterman06,
author = {Michael S. Waterman},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Stan Ulam and Computational Biology},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {159--159},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_14},
doi = {10.1007/11732990\_14},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/Waterman06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/WexlerZZ06,
author = {Ydo Wexler and
Chaya Ben{-}Zaken Zilberstein and
Michal Ziv{-}Ukelson},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {A Study of Accessible Motifs and {RNA} Folding Complexity},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {473--487},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_40},
doi = {10.1007/11732990\_40},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/WexlerZZ06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/XieS06,
author = {Wei Xie and
Nikolaos V. Sahinidis},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {A Branch-and-Reduce Algorithm for the Contact Map Overlap Problem},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {516--529},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_43},
doi = {10.1007/11732990\_43},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/XieS06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/XuJB06,
author = {Jinbo Xu and
Feng Jiao and
Bonnie Berger},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {A Parameterized Algorithm for Protein Structure Alignment},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {488--499},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_41},
doi = {10.1007/11732990\_41},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/XuJB06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/YeFB06,
author = {Xiaoduan Ye and
Alan M. Friedman and
Chris Bailey{-}Kellogg},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Hypergraph Model of Multi-residue Interactions in Proteins: Sequentially-Constrained
Partitioning Algorithms for Optimization of Site-Directed Protein
Recombination},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {15--29},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_2},
doi = {10.1007/11732990\_2},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/YeFB06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/Zimmer06,
author = {Carl Zimmer},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {An Outsider's View of the Genome},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {425},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_35},
doi = {10.1007/11732990\_35},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/Zimmer06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/Zubarev06,
author = {Roman A. Zubarev},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Revealing the Proteome Complexity by Mass Spectrometry},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {456--457},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_38},
doi = {10.1007/11732990\_38},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/recomb/Zubarev06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/recomb/2006,
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990},
doi = {10.1007/11732990},
isbn = {3-540-33295-2},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/2006.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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