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@article{DBLP:journals/jcb/AdamTLS07,
  author       = {Zaky Adam and
                  Monique Turmel and
                  Claude Lemieux and
                  David Sankoff},
  title        = {Common Intervals and Symmetric Difference in a Model-Free Phylogenomics,
                  with an Application to Streptophyte Evolution},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {4},
  pages        = {436--445},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.A005},
  doi          = {10.1089/CMB.2007.A005},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/AdamTLS07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/AgarwalMW07,
  author       = {Pankaj K. Agarwal and
                  Nabil H. Mustafa and
                  Yusu Wang},
  title        = {Fast Molecular Shape Matching Using Contact Maps},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {2},
  pages        = {131--143},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0004},
  doi          = {10.1089/CMB.2007.0004},
  timestamp    = {Mon, 02 Jan 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/AgarwalMW07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/AlbertDDKSZW07,
  author       = {R{\'{e}}ka Albert and
                  Bhaskar DasGupta and
                  Riccardo Dondi and
                  Sema Kachalo and
                  Eduardo D. Sontag and
                  Alexander Zelikovsky and
                  Kelly Westbrooks},
  title        = {A Novel Method for Signal Transduction Network Inference from Indirect
                  Experimental Evidence},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {7},
  pages        = {927--949},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0015},
  doi          = {10.1089/CMB.2007.0015},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcb/AlbertDDKSZW07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/AnderssonL07,
  author       = {Samuel A. Andersson and
                  Jens Lagergren},
  title        = {Motif Yggdrasil: Sampling Sequence Motifs from a Tree Mixture Model},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {5},
  pages        = {682--697},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.R010},
  doi          = {10.1089/CMB.2007.R010},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcb/AnderssonL07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/AndrecutK07,
  author       = {Mircea Andrecut and
                  Stuart A. Kauffman},
  title        = {A Physical Analogy of the Genetic Toggle Switch},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {7},
  pages        = {973--983},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0038},
  doi          = {10.1089/CMB.2007.0038},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/AndrecutK07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/AngelovHKKK07,
  author       = {Stanislav Angelov and
                  Boulos Harb and
                  Sampath Kannan and
                  Sanjeev Khanna and
                  Junhyong Kim},
  title        = {Efficient Enumeration of Phylogenetically Informative Substrings},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {6},
  pages        = {701--723},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.R011},
  doi          = {10.1089/CMB.2007.R011},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/AngelovHKKK07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/AngibaudFRV07,
  author       = {S{\'{e}}bastien Angibaud and
                  Guillaume Fertin and
                  Irena Rusu and
                  St{\'{e}}phane Vialette},
  title        = {A Pseudo-Boolean Framework for Computing Rearrangement Distances between
                  Genomes with Duplicates},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {4},
  pages        = {379--393},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.A001},
  doi          = {10.1089/CMB.2007.A001},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/AngibaudFRV07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Apostolico07,
  author       = {Alberto Apostolico},
  title        = {Preface},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {5},
  pages        = {537--538},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.00P1},
  doi          = {10.1089/CMB.2007.00P1},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcb/Apostolico07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Apostolico07a,
  author       = {Alberto Apostolico},
  title        = {Preface},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {6},
  pages        = {699--700},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.00P2},
  doi          = {10.1089/CMB.2007.00P2},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/Apostolico07a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/AstrandMR07,
  author       = {Magnus {\AA}strand and
                  Petter Mostad and
                  Mats Rudemo},
  title        = {Improved Covariance Matrix Estimators for Weighted Analysis of Microarray
                  Data},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {10},
  pages        = {1353--1367},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0078},
  doi          = {10.1089/CMB.2007.0078},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/AstrandMR07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/BackofenCHLRWZ07,
  author       = {Rolf Backofen and
                  Shihyen Chen and
                  Danny Hermelin and
                  Gad M. Landau and
                  Mikhail A. Roytberg and
                  Oren Weimann and
                  Kaizhong Zhang},
  title        = {Locality and Gaps in {RNA} Comparison},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {8},
  pages        = {1074--1087},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0062},
  doi          = {10.1089/CMB.2007.0062},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/BackofenCHLRWZ07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/BaderO07,
  author       = {Martin Bader and
                  Enno Ohlebusch},
  title        = {Sorting by Weighted Reversals, Transpositions, and Inverted Transpositions},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {5},
  pages        = {615--636},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.R006},
  doi          = {10.1089/CMB.2007.R006},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/BaderO07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/BishopDMRR07,
  author       = {Morgan A. Bishop and
                  Arkadii G. D'yachkov and
                  Anthony J. Macula and
                  Thomas E. Renz and
                  Vyacheslav V. Rykov},
  title        = {Free Energy Gap and Statistical Thermodynamic Fidelity of {DNA} Codes},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {8},
  pages        = {1088--1104},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0083},
  doi          = {10.1089/CMB.2007.0083},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/BishopDMRR07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/BishopMNWPR07,
  author       = {Morgan A. Bishop and
                  Anthony J. Macula and
                  Kayla Nimmo and
                  Lauren Wood and
                  Wendy K. Pogozelski and
                  Thomas E. Renz},
  title        = {Group Testing to Annihilate Pairs Applied to {DNA} Cross-Hybridization
                  Elimination Using {SYBR} Green {I}},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {1},
  pages        = {84--96},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2006.0114},
  doi          = {10.1089/CMB.2006.0114},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/BishopMNWPR07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/BlinBHGBE07,
  author       = {Guillaume Blin and
                  Eric Blais and
                  Danny Hermelin and
                  Pierre Guillon and
                  Mathieu Blanchette and
                  Nadia El{-}Mabrouk},
  title        = {Gene Maps Linearization Using Genomic Rearrangement Distances},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {4},
  pages        = {394--407},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.A002},
  doi          = {10.1089/CMB.2007.A002},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/BlinBHGBE07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/BockGG07,
  author       = {Mary Ellen Bock and
                  Claudio Garutti and
                  Concettina Guerra},
  title        = {Discovery of Similar Regions on Protein Surfaces},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {3},
  pages        = {285--299},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2006.0145},
  doi          = {10.1089/CMB.2006.0145},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcb/BockGG07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/CameronBW07,
  author       = {Michael Cameron and
                  Yaniv Bernstein and
                  Hugh E. Williams},
  title        = {Clustered Sequence Representation for Fast Homology Search},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {5},
  pages        = {594--614},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.R005},
  doi          = {10.1089/CMB.2007.R005},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/CameronBW07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ChenFBDKLKLK07,
  author       = {Brian Y. Chen and
                  Viacheslav Fofanov and
                  Drew H. Bryant and
                  Bradley D. Dodson and
                  David M. Kristensen and
                  Andreas Martin Lisewski and
                  Marek Kimmel and
                  Olivier Lichtarge and
                  Lydia E. Kavraki},
  title        = {The {MASH} Pipeline for Protein Function Prediction and an Algorithm
                  for the Geometric Refinement of 3D Motifs},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {6},
  pages        = {791--816},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.R017},
  doi          = {10.1089/CMB.2007.R017},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/ChenFBDKLKLK07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ChengD07,
  author       = {Yongxi Cheng and
                  Ding{-}Zhu Du},
  title        = {Efficient Constructions of Disjunct Matrices with Applications to
                  {DNA} Library Screening},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {9},
  pages        = {1208--1216},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0052},
  doi          = {10.1089/CMB.2007.0052},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/ChengD07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ChennubhotlaB07,
  author       = {Chakra Chennubhotla and
                  Ivet Bahar},
  title        = {Markov Methods for Hierarchical Coarse-Graining of Large Protein Dynamics},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {6},
  pages        = {765--776},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.R015},
  doi          = {10.1089/CMB.2007.R015},
  timestamp    = {Fri, 20 Jan 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/ChennubhotlaB07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ChiangABHL07,
  author       = {Tsung{-}Han Chiang and
                  Mehmet Serkan Apaydin and
                  Douglas L. Brutlag and
                  David Hsu and
                  Jean{-}Claude Latombe},
  title        = {Using Stochastic Roadmap Simulation to Predict Experimental Quantities
                  in Protein Folding Kinetics: Folding Rates and Phi-Values},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {5},
  pages        = {578--593},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.R004},
  doi          = {10.1089/CMB.2007.R004},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcb/ChiangABHL07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ChorT07,
  author       = {Benny Chor and
                  Tamir Tuller},
  title        = {Biological Networks: Comparison, Conservation, and Evolution via Relative
                  Description Length},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {6},
  pages        = {817--838},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.R018},
  doi          = {10.1089/CMB.2007.R018},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/ChorT07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ChristodoulakisGIAS07,
  author       = {Manolis Christodoulakis and
                  Geoffrey Brian Golding and
                  Costas S. Iliopoulos and
                  Yoan Jos{\'{e}} Pinz{\'{o}}n Ardila and
                  William F. Smyth},
  title        = {Efficient Algorithms for Counting and Reporting Segregating Sites
                  in Genomic Sequences},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {7},
  pages        = {1001--1010},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2006.0136},
  doi          = {10.1089/CMB.2006.0136},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/ChristodoulakisGIAS07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/DeforcheCLSMRVL07,
  author       = {Koen Deforche and
                  Ricardo Camacho and
                  Kristel Van Laethem and
                  Beth Shapiro and
                  Yves Moreau and
                  Andrew Rambaut and
                  Anne{-}Mieke Vandamme and
                  Philippe Lemey},
  title        = {Estimating the Relative Contribution of dNTP Pool Imbalance and {APOBEC3G/3F}
                  Editing to {HIV} Evolution \emph{In Vivo}},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {8},
  pages        = {1105--1114},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0073},
  doi          = {10.1089/CMB.2007.0073},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcb/DeforcheCLSMRVL07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/DialloMB07,
  author       = {Abdoulaye Banir{\'{e}} Diallo and
                  Vladimir Makarenkov and
                  Mathieu Blanchette},
  title        = {Exact and Heuristic Algorithms for the Indel Maximum Likelihood Problem},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {4},
  pages        = {446--461},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.A006},
  doi          = {10.1089/CMB.2007.A006},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/DialloMB07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/DomanicP07,
  author       = {Nevzat Onur Domani{\c{c}} and
                  Franco P. Preparata},
  title        = {A Novel Approach to the Detection of Genomic Approximate Tandem Repeats
                  in the Levenshtein Metric},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {7},
  pages        = {873--891},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0018},
  doi          = {10.1089/CMB.2007.0018},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/DomanicP07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/EliasT07,
  author       = {Isaac Elias and
                  Tamir Tuller},
  title        = {Reconstruction of Ancestral Genomic Sequences Using Likelihood},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {2},
  pages        = {216--237},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2006.0101},
  doi          = {10.1089/CMB.2006.0101},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/EliasT07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Emmert-Streib07,
  author       = {Frank Emmert{-}Streib},
  title        = {The Chronic Fatigue Syndrome: {A} Comparative Pathway Analysis},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {7},
  pages        = {961--972},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0041},
  doi          = {10.1089/CMB.2007.0041},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/Emmert-Streib07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/FrenkelT07,
  author       = {Zakharia M. Frenkel and
                  Edward N. Trifonov},
  title        = {Evolutionary Networks in the Formatted Protein Sequence Space},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {8},
  pages        = {1044--1057},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0066},
  doi          = {10.1089/CMB.2007.0066},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/FrenkelT07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/FuCVNZJ07,
  author       = {Zheng Fu and
                  Xin Chen and
                  Vladimir Vacic and
                  Peng Nan and
                  Yang Zhong and
                  Tao Jiang},
  title        = {{MSOAR:} {A} High-Throughput Ortholog Assignment System Based on Genome
                  Rearrangement},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {9},
  pages        = {1160--1175},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0048},
  doi          = {10.1089/CMB.2007.0048},
  timestamp    = {Wed, 22 Dec 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/FuCVNZJ07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/FussDDK07,
  author       = {Hendrik Fu{\ss} and
                  Werner Dubitzky and
                  C. Stephen Downes and
                  Mary Jo Kurth},
  title        = {Deactivation of Src Family Kinases: Hypothesis Testing Using a Monte
                  Carlo Sensitivity Analysis of Systems-Level Properties},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {9},
  pages        = {1185--1200},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0095},
  doi          = {10.1089/CMB.2007.0095},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/FussDDK07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/GronauM07,
  author       = {Ilan Gronau and
                  Shlomo Moran},
  title        = {Neighbor Joining Algorithms for Inferring Phylogenies via {LCA} Distances},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {1},
  pages        = {1--15},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2006.0115},
  doi          = {10.1089/CMB.2006.0115},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/GronauM07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/GusfieldBBS07,
  author       = {Dan Gusfield and
                  Vikas Bansal and
                  Vineet Bafna and
                  Yun S. Song},
  title        = {A Decomposition Theory for Phylogenetic Networks and Incompatible
                  Characters},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {10},
  pages        = {1247--1272},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2006.0137},
  doi          = {10.1089/CMB.2006.0137},
  timestamp    = {Fri, 09 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/GusfieldBBS07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/HavukkalaV07,
  author       = {Ilkka Havukkala and
                  Stijn Vanderlooy},
  title        = {On the Reliable Identification of Plant Sequences Containing a Polyadenylation
                  Site},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {9},
  pages        = {1229--1245},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0058},
  doi          = {10.1089/CMB.2007.0058},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/HavukkalaV07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/HeckermanKL07,
  author       = {David Heckerman and
                  Carl Myers Kadie and
                  Jennifer Listgarten},
  title        = {Leveraging Information Across {HLA} Alleles/Supertypes Improves Epitope
                  Prediction},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {6},
  pages        = {736--746},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.R013},
  doi          = {10.1089/CMB.2007.R013},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/HeckermanKL07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/HirschSL07,
  author       = {Michael Hirsch and
                  Stephen Swift and
                  Xiaohui Liu},
  title        = {Optimal Search Space for Clustering Gene Expression Data via Consensus},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {10},
  pages        = {1327--1341},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0153},
  doi          = {10.1089/CMB.2007.0153},
  timestamp    = {Wed, 20 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcb/HirschSL07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/HuangMF07,
  author       = {Jim C. Huang and
                  Quaid Morris and
                  Brendan J. Frey},
  title        = {Bayesian Inference of MicroRNA Targets from Sequence and Expression
                  Data},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {5},
  pages        = {550--563},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.R002},
  doi          = {10.1089/CMB.2007.R002},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/HuangMF07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/KaminskiB07,
  author       = {Naftali Kaminski and
                  Ziv Bar{-}Joseph},
  title        = {A Patient-Gene Model for Temporal Expression Profiles in Clinical
                  Studies},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {3},
  pages        = {324--338},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0001},
  doi          = {10.1089/CMB.2007.0001},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/KaminskiB07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Kong07,
  author       = {Yong Kong},
  title        = {Generalized Correlation Functions and Their Applications in Selection
                  of Optimal Multiple Spaced Seeds for Homology Search},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {2},
  pages        = {238--254},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2006.0008},
  doi          = {10.1089/CMB.2006.0008},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/Kong07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/KoyuturkSG07,
  author       = {Mehmet Koyut{\"{u}}rk and
                  Wojciech Szpankowski and
                  Ananth Grama},
  title        = {Assessing Significance of Connectivity and Conservation in Protein
                  Interaction Networks},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {6},
  pages        = {747--764},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.R014},
  doi          = {10.1089/CMB.2007.R014},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/KoyuturkSG07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/LajoieBEG07,
  author       = {Mathieu Lajoie and
                  Denis Bertrand and
                  Nadia El{-}Mabrouk and
                  Olivier Gascuel},
  title        = {Duplication and Inversion History of a Tandemly Repeated Genes Family},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {4},
  pages        = {462--478},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.A007},
  doi          = {10.1089/CMB.2007.A007},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/LajoieBEG07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/LeesRSG07,
  author       = {Karen Lees and
                  Stephen J. Roberts and
                  Pari Skamnioti and
                  Sarah J. Gurr},
  title        = {Gene Microarray Analysis Using Angular Distribution Decomposition},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {1},
  pages        = {68--83},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2006.0098},
  doi          = {10.1089/CMB.2006.0098},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/LeesRSG07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/LevyRLHCCS07,
  author       = {Dan Levy and
                  Christopher Reeder and
                  Bradford Loucas and
                  Lynn Hlatky and
                  Allen M. Chen and
                  Michael Cornforth and
                  Rainer K. Sachs},
  title        = {Interpreting Chromosome Aberration Spectra},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {2},
  pages        = {144--155},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2006.0127},
  doi          = {10.1089/CMB.2006.0127},
  timestamp    = {Wed, 25 Nov 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/LevyRLHCCS07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/LiVSWL07,
  author       = {Haifeng Li and
                  Anton Valouev and
                  David C. Schwartz and
                  Michael S. Waterman and
                  Lei M. Li},
  title        = {A Quantile Method for Sizing Optical Maps},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {3},
  pages        = {255--266},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2006.0006},
  doi          = {10.1089/CMB.2006.0006},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/LiVSWL07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/LubomirskiDBCDA07,
  author       = {Mariusz Lubomirski and
                  Michael R. D'Andrea and
                  Stanley M. Belkowski and
                  Javier Cabrera and
                  James M. Dixon and
                  Dhammika Amaratunga},
  title        = {A Consolidated Approach to Analyzing Data from High-Throughput Protein
                  Microarrays with an Application to Immune Response Profiling in Humans},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {3},
  pages        = {350--359},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2006.0116},
  doi          = {10.1089/CMB.2006.0116},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/LubomirskiDBCDA07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/MartinGWFRP07,
  author       = {Francis L. Martin and
                  Matthew J. German and
                  Ernst Wit and
                  Thomas Fearn and
                  Narasimhan Ragavan and
                  Hubert M. Pollock},
  title        = {Identifying Variables Responsible for Clustering in Discriminant Analysis
                  of Data from Infrared Microspectroscopy of a Biological Sample},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {9},
  pages        = {1176--1184},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0057},
  doi          = {10.1089/CMB.2007.0057},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/MartinGWFRP07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/MesserBVA07,
  author       = {Philipp W. Messer and
                  Ralf Bundschuh and
                  Martin Vingron and
                  Peter F. Arndt},
  title        = {Effects of Long-Range Correlations in {DNA} on Sequence Alignment
                  Score Statistics},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {5},
  pages        = {655--668},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.R008},
  doi          = {10.1089/CMB.2007.R008},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/MesserBVA07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/NarayananK07,
  author       = {Manikandan Narayanan and
                  Richard M. Karp},
  title        = {Comparing Protein Interaction Networks via a Graph Match-and-Split
                  Algorithm},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {7},
  pages        = {892--907},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0025},
  doi          = {10.1089/CMB.2007.0025},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/NarayananK07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Ozery-FlatoS07,
  author       = {Michal Ozery{-}Flato and
                  Ron Shamir},
  title        = {Sorting by Reciprocal Translocations via Reversals Theory},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {4},
  pages        = {408--422},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.A003},
  doi          = {10.1089/CMB.2007.A003},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/Ozery-FlatoS07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Parida07,
  author       = {Laxmi Parida},
  title        = {Gapped Permutation Pattern Discovery for Gene Order Comparisons},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {1},
  pages        = {45--55},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2006.0103},
  doi          = {10.1089/CMB.2006.0103},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/Parida07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Parida07a,
  author       = {Laxmi Parida},
  title        = {Discovering Topological Motifs Using a Compact Notation},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {3},
  pages        = {300--323},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2006.0142},
  doi          = {10.1089/CMB.2006.0142},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/Parida07a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Parida07b,
  author       = {Laxmi Parida},
  title        = {Statistical Significance of Large Gene Clusters},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {9},
  pages        = {1145--1159},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0064},
  doi          = {10.1089/CMB.2007.0064},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/Parida07b.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/PattengaleGM07,
  author       = {Nicholas D. Pattengale and
                  Eric J. Gottlieb and
                  Bernard M. E. Moret},
  title        = {Efficiently Computing the Robinson-Foulds Metric},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {6},
  pages        = {724--735},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.R012},
  doi          = {10.1089/CMB.2007.R012},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/PattengaleGM07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Przytycka07,
  author       = {Teresa M. Przytycka},
  title        = {Stability of Characters and Construction of Phylogenetic Trees},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {5},
  pages        = {539--549},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.R001},
  doi          = {10.1089/CMB.2007.R001},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/Przytycka07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/RastegariC07,
  author       = {Baharak Rastegari and
                  Anne Condon},
  title        = {Parsing Nucleic Acid Pseudoknotted Secondary Structure: Algorithm
                  and Applications},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {1},
  pages        = {16--32},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2006.0108},
  doi          = {10.1089/CMB.2006.0108},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/RastegariC07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/RempalaRKT07,
  author       = {Grzegorz A. Rempala and
                  Kenneth S. Ramos and
                  Ted Kalbfleisch and
                  Ivo Teneng},
  title        = {Validation of a Mathematical Model of Gene Transcription in Aggregated
                  Cellular Systems: Application to {L1} Retrotransposition},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {3},
  pages        = {339--349},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2006.0125},
  doi          = {10.1089/CMB.2006.0125},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/RempalaRKT07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Rosenberg07,
  author       = {Noah A. Rosenberg},
  title        = {Counting Coalescent Histories},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {3},
  pages        = {360--377},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2006.0109},
  doi          = {10.1089/CMB.2006.0109},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcb/Rosenberg07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/SahaWKROMV07,
  author       = {Nilanjan Saha and
                  Layne T. Watson and
                  Karen Kafadar and
                  Naren Ramakrishnan and
                  Alexey Onufriev and
                  Shrinivasrao P. Mane and
                  Cecilia Vasquez{-}Robinet},
  title        = {Validation and Estimation of Parameters for a General Probabilistic
                  Model of the {PCR} Process},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {1},
  pages        = {97--112},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2006.0123},
  doi          = {10.1089/CMB.2006.0123},
  timestamp    = {Tue, 21 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/SahaWKROMV07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ScheidS07,
  author       = {Stefanie Scheid and
                  Rainer Spang},
  title        = {Compensating for Unknown Confounders in Microarray Data Analysis Using
                  Filtered Permutations},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {5},
  pages        = {669--681},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.R009},
  doi          = {10.1089/CMB.2007.R009},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/ScheidS07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/SchmidlerLO07,
  author       = {Scott C. Schmidler and
                  Joseph E. Lucas and
                  Terrence G. Oas},
  title        = {Statistical Estimation of Statistical Mechanical Models: Helix-Coil
                  Theory and Peptide Helicity Prediction},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {10},
  pages        = {1287--1310},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0008},
  doi          = {10.1089/CMB.2007.0008},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcb/SchmidlerLO07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ShiMDQB07,
  author       = {Yi Y. Shi and
                  Gerald A. Miller and
                  Oleg Denisenko and
                  Hong Qian and
                  Karol Bomsztyk},
  title        = {Quantitative Model for Binary Measurements of Protein-Protein Interactions},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {7},
  pages        = {1011--1023},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0024},
  doi          = {10.1089/CMB.2007.0024},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/ShiMDQB07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Shibuya07,
  author       = {Tetsuo Shibuya},
  title        = {Efficient Substructure {RMSD} Query Algorithms},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {9},
  pages        = {1201--1207},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0079},
  doi          = {10.1089/CMB.2007.0079},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/Shibuya07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/SiebertB07,
  author       = {Sven Siebert and
                  Rolf Backofen},
  title        = {A Dynamic Programming Approach for Finding Common Patterns in RNAs},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {1},
  pages        = {33--44},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2006.0089},
  doi          = {10.1089/CMB.2006.0089},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/SiebertB07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/SongDGLW07,
  author       = {Yun S. Song and
                  Zhihong Ding and
                  Dan Gusfield and
                  Charles H. Langley and
                  Yufeng Wu},
  title        = {Algorithms to Distinguish the Role of Gene-Conversion from Single-Crossover
                  Recombination in the Derivation of {SNP} Sequences in Populations},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {10},
  pages        = {1273--1286},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0096},
  doi          = {10.1089/CMB.2007.0096},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/SongDGLW07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/SongSD07,
  author       = {Nan Song and
                  R. D. Sedgewick and
                  Dannie Durand},
  title        = {Domain Architecture Comparison for Multidomain Homology Identification},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {4},
  pages        = {496--516},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.A009},
  doi          = {10.1089/CMB.2007.A009},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcb/SongSD07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/StefankovicV07,
  author       = {Daniel Stefankovic and
                  Eric Vigoda},
  title        = {Phylogeny of Mixture Models: Robustness of Maximum Likelihood and
                  Non-Identifiable Distributions},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {2},
  pages        = {156--189},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2006.0126},
  doi          = {10.1089/CMB.2006.0126},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/StefankovicV07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/SternerSB07,
  author       = {Beckett W. Sterner and
                  Rohit Singh and
                  Bonnie Berger},
  title        = {Predicting and Annotating Catalytic Residues: An Information Theoretic
                  Approach},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {8},
  pages        = {1058--1073},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0042},
  doi          = {10.1089/CMB.2007.0042},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcb/SternerSB07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/StojmirovicY07,
  author       = {Aleksandar Stojmirovic and
                  Yi{-}Kuo Yu},
  title        = {Information Flow in Interaction Networks},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {8},
  pages        = {1115--1143},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0069},
  doi          = {10.1089/CMB.2007.0069},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/StojmirovicY07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ThanRIN07,
  author       = {Cuong Than and
                  Derek A. Ruths and
                  Hideki Innan and
                  Luay Nakhleh},
  title        = {Confounding Factors in {HGT} Detection: Statistical Error, Coalescent
                  Effects, and Multiple Solutions},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {4},
  pages        = {517--535},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.A010},
  doi          = {10.1089/CMB.2007.A010},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcb/ThanRIN07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ThomasTTA07,
  author       = {Shawna L. Thomas and
                  Xinyu Tang and
                  Lydia Tapia and
                  Nancy M. Amato},
  title        = {Simulating Protein Motions with Rigidity Analysis},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {6},
  pages        = {839--855},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.R019},
  doi          = {10.1089/CMB.2007.R019},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/ThomasTTA07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/TreschBSKPB07,
  author       = {Achim Tresch and
                  Tim Bei{\ss}barth and
                  Holger S{\"{u}}ltmann and
                  Ruprecht Kuner and
                  Annemarie Poustka and
                  Andreas Buness},
  title        = {Discrimination of Direct and Indirect Interactions in a Network of
                  Regulatory Effects},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {9},
  pages        = {1217--1228},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0085},
  doi          = {10.1089/CMB.2007.0085},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/TreschBSKPB07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Veksler-LublinskyZBK07,
  author       = {Isana Veksler{-}Lublinsky and
                  Michal Ziv{-}Ukelson and
                  Danny Barash and
                  Klara Kedem},
  title        = {A Structure-Based Flexible Search Method for Motifs in {RNA}},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {7},
  pages        = {908--926},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0061},
  doi          = {10.1089/CMB.2007.0061},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/Veksler-LublinskyZBK07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/WaldispuhlC07,
  author       = {J{\'{e}}r{\^{o}}me Waldisp{\"{u}}hl and
                  Peter Clote},
  title        = {Computing the Partition Function and Sampling for Saturated Secondary
                  Structures of RNA, with Respect to the Turner Energy Model},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {2},
  pages        = {190--215},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2006.0012},
  doi          = {10.1089/CMB.2006.0012},
  timestamp    = {Tue, 07 May 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcb/WaldispuhlC07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/WexlerZZ07,
  author       = {Ydo Wexler and
                  Chaya Ben{-}Zaken Zilberstein and
                  Michal Ziv{-}Ukelson},
  title        = {A Study of Accessible Motifs and {RNA} Folding Complexity},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {6},
  pages        = {856--872},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.R020},
  doi          = {10.1089/CMB.2007.R020},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/WexlerZZ07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/WojtowiczT07,
  author       = {Damian W{\'{o}}jtowicz and
                  Jerzy Tiuryn},
  title        = {Evolution of Gene Families Based on Gene Duplication, Loss, Accumulated
                  Change, and Innovation},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {4},
  pages        = {479--495},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.A008},
  doi          = {10.1089/CMB.2007.A008},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/WojtowiczT07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/WuTE07,
  author       = {Xue Wu and
                  Chau{-}Wen Tseng and
                  Nathan Edwards},
  title        = {HMMatch: Peptide Identification by Spectral Matching of Tandem Mass
                  Spectra Using Hidden Markov Models},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {8},
  pages        = {1025--1043},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0071},
  doi          = {10.1089/CMB.2007.0071},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/WuTE07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/XieS07,
  author       = {Wei Xie and
                  Nikolaos V. Sahinidis},
  title        = {A Reduction-Based Exact Algorithm for the Contact Map Overlap Problem},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {5},
  pages        = {637--654},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.R007},
  doi          = {10.1089/CMB.2007.R007},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/XieS07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/XingJS07,
  author       = {Eric P. Xing and
                  Michael I. Jordan and
                  Roded Sharan},
  title        = {Bayesian Haplotype Inference via the Dirichlet Process},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {3},
  pages        = {267--284},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2006.0102},
  doi          = {10.1089/CMB.2006.0102},
  timestamp    = {Sat, 05 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcb/XingJS07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/XuJB07,
  author       = {Jinbo Xu and
                  Feng Jiao and
                  Bonnie Berger},
  title        = {A Parameterized Algorithm for Protein Structure Alignment},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {5},
  pages        = {564--577},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.R003},
  doi          = {10.1089/CMB.2007.R003},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/XuJB07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/XuZS07,
  author       = {Wei Xu and
                  Chunfang Zheng and
                  David Sankoff},
  title        = {Paths and Cycles in Breakpoint Graph of Random Multichromosomal Genomes},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {4},
  pages        = {423--435},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.A004},
  doi          = {10.1089/CMB.2007.A004},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/XuZS07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/YangS07,
  author       = {Qingwu Yang and
                  Sing{-}Hoi Sze},
  title        = {Path Matching and Graph Matching in Biological Networks},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {1},
  pages        = {56--67},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2006.0076},
  doi          = {10.1089/CMB.2006.0076},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/YangS07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/YeFB07,
  author       = {Xiaoduan Ye and
                  Alan M. Friedman and
                  Chris Bailey{-}Kellogg},
  title        = {Hypergraph Model of Multi-Residue Interactions in Proteins: Sequentially-Constrained
                  Partitioning Algorithms for Optimization of Site-Directed Protein
                  Recombination},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {6},
  pages        = {777--790},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.R016},
  doi          = {10.1089/CMB.2007.R016},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/YeFB07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ZeiserML07,
  author       = {Stefan Zeiser and
                  Johannes M{\"{u}}ller and
                  Volkmar Liebscher},
  title        = {Modeling the Hes1 Oscillator},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {7},
  pages        = {984--1000},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0029},
  doi          = {10.1089/CMB.2007.0029},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/ZeiserML07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ZhangW07,
  author       = {Liqing Zhang and
                  Layne T. Watson},
  title        = {Note on the Computation of Critical Effective Population Sizes},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {7},
  pages        = {950--960},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0007},
  doi          = {10.1089/CMB.2007.0007},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/ZhangW07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ZhouF07,
  author       = {Leming Zhou and
                  Liliana Florea},
  title        = {Designing Sensitive and Specific Spaced Seeds for Cross-Species mRNA-to-Genome
                  Alignment},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {2},
  pages        = {113--130},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2006.0130},
  doi          = {10.1089/CMB.2006.0130},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcb/ZhouF07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Zhu07,
  author       = {Binhai Zhu},
  title        = {Protein Local Structure Alignment Under the Discrete Fr{\'{e}}chet
                  Distance},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {10},
  pages        = {1343--1351},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0156},
  doi          = {10.1089/CMB.2007.0156},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/Zhu07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ZhuH07,
  author       = {Dongxiao Zhu and
                  Alfred O. Hero III},
  title        = {Bayesian Hierarchical Model for Large-Scale Covariance Matrix Estimation},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {10},
  pages        = {1311--1326},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2006.0151},
  doi          = {10.1089/CMB.2006.0151},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/ZhuH07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
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