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@article{DBLP:journals/jcb/AdamTLS07, author = {Zaky Adam and Monique Turmel and Claude Lemieux and David Sankoff}, title = {Common Intervals and Symmetric Difference in a Model-Free Phylogenomics, with an Application to Streptophyte Evolution}, journal = {J. Comput. Biol.}, volume = {14}, number = {4}, pages = {436--445}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.A005}, doi = {10.1089/CMB.2007.A005}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/AdamTLS07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/AgarwalMW07, author = {Pankaj K. Agarwal and Nabil H. Mustafa and Yusu Wang}, title = {Fast Molecular Shape Matching Using Contact Maps}, journal = {J. Comput. Biol.}, volume = {14}, number = {2}, pages = {131--143}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0004}, doi = {10.1089/CMB.2007.0004}, timestamp = {Mon, 02 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/AgarwalMW07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/AlbertDDKSZW07, author = {R{\'{e}}ka Albert and Bhaskar DasGupta and Riccardo Dondi and Sema Kachalo and Eduardo D. Sontag and Alexander Zelikovsky and Kelly Westbrooks}, title = {A Novel Method for Signal Transduction Network Inference from Indirect Experimental Evidence}, journal = {J. Comput. Biol.}, volume = {14}, number = {7}, pages = {927--949}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0015}, doi = {10.1089/CMB.2007.0015}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jcb/AlbertDDKSZW07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/AnderssonL07, author = {Samuel A. Andersson and Jens Lagergren}, title = {Motif Yggdrasil: Sampling Sequence Motifs from a Tree Mixture Model}, journal = {J. Comput. Biol.}, volume = {14}, number = {5}, pages = {682--697}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.R010}, doi = {10.1089/CMB.2007.R010}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jcb/AnderssonL07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/AndrecutK07, author = {Mircea Andrecut and Stuart A. Kauffman}, title = {A Physical Analogy of the Genetic Toggle Switch}, journal = {J. Comput. Biol.}, volume = {14}, number = {7}, pages = {973--983}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0038}, doi = {10.1089/CMB.2007.0038}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/AndrecutK07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/AngelovHKKK07, author = {Stanislav Angelov and Boulos Harb and Sampath Kannan and Sanjeev Khanna and Junhyong Kim}, title = {Efficient Enumeration of Phylogenetically Informative Substrings}, journal = {J. Comput. Biol.}, volume = {14}, number = {6}, pages = {701--723}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.R011}, doi = {10.1089/CMB.2007.R011}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/AngelovHKKK07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/AngibaudFRV07, author = {S{\'{e}}bastien Angibaud and Guillaume Fertin and Irena Rusu and St{\'{e}}phane Vialette}, title = {A Pseudo-Boolean Framework for Computing Rearrangement Distances between Genomes with Duplicates}, journal = {J. Comput. Biol.}, volume = {14}, number = {4}, pages = {379--393}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.A001}, doi = {10.1089/CMB.2007.A001}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/AngibaudFRV07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/Apostolico07, author = {Alberto Apostolico}, title = {Preface}, journal = {J. Comput. Biol.}, volume = {14}, number = {5}, pages = {537--538}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.00P1}, doi = {10.1089/CMB.2007.00P1}, timestamp = {Sat, 30 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jcb/Apostolico07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/Apostolico07a, author = {Alberto Apostolico}, title = {Preface}, journal = {J. Comput. Biol.}, volume = {14}, number = {6}, pages = {699--700}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.00P2}, doi = {10.1089/CMB.2007.00P2}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/Apostolico07a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/AstrandMR07, author = {Magnus {\AA}strand and Petter Mostad and Mats Rudemo}, title = {Improved Covariance Matrix Estimators for Weighted Analysis of Microarray Data}, journal = {J. Comput. Biol.}, volume = {14}, number = {10}, pages = {1353--1367}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0078}, doi = {10.1089/CMB.2007.0078}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/AstrandMR07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/BackofenCHLRWZ07, author = {Rolf Backofen and Shihyen Chen and Danny Hermelin and Gad M. Landau and Mikhail A. Roytberg and Oren Weimann and Kaizhong Zhang}, title = {Locality and Gaps in {RNA} Comparison}, journal = {J. Comput. Biol.}, volume = {14}, number = {8}, pages = {1074--1087}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0062}, doi = {10.1089/CMB.2007.0062}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/BackofenCHLRWZ07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/BaderO07, author = {Martin Bader and Enno Ohlebusch}, title = {Sorting by Weighted Reversals, Transpositions, and Inverted Transpositions}, journal = {J. Comput. Biol.}, volume = {14}, number = {5}, pages = {615--636}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.R006}, doi = {10.1089/CMB.2007.R006}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/BaderO07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/BishopDMRR07, author = {Morgan A. Bishop and Arkadii G. D'yachkov and Anthony J. Macula and Thomas E. Renz and Vyacheslav V. Rykov}, title = {Free Energy Gap and Statistical Thermodynamic Fidelity of {DNA} Codes}, journal = {J. Comput. Biol.}, volume = {14}, number = {8}, pages = {1088--1104}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0083}, doi = {10.1089/CMB.2007.0083}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/BishopDMRR07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/BishopMNWPR07, author = {Morgan A. Bishop and Anthony J. Macula and Kayla Nimmo and Lauren Wood and Wendy K. Pogozelski and Thomas E. Renz}, title = {Group Testing to Annihilate Pairs Applied to {DNA} Cross-Hybridization Elimination Using {SYBR} Green {I}}, journal = {J. Comput. Biol.}, volume = {14}, number = {1}, pages = {84--96}, year = {2007}, url = {https://doi.org/10.1089/cmb.2006.0114}, doi = {10.1089/CMB.2006.0114}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/BishopMNWPR07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/BlinBHGBE07, author = {Guillaume Blin and Eric Blais and Danny Hermelin and Pierre Guillon and Mathieu Blanchette and Nadia El{-}Mabrouk}, title = {Gene Maps Linearization Using Genomic Rearrangement Distances}, journal = {J. Comput. Biol.}, volume = {14}, number = {4}, pages = {394--407}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.A002}, doi = {10.1089/CMB.2007.A002}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/BlinBHGBE07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/BockGG07, author = {Mary Ellen Bock and Claudio Garutti and Concettina Guerra}, title = {Discovery of Similar Regions on Protein Surfaces}, journal = {J. Comput. Biol.}, volume = {14}, number = {3}, pages = {285--299}, year = {2007}, url = {https://doi.org/10.1089/cmb.2006.0145}, doi = {10.1089/CMB.2006.0145}, timestamp = {Sat, 30 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jcb/BockGG07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/CameronBW07, author = {Michael Cameron and Yaniv Bernstein and Hugh E. Williams}, title = {Clustered Sequence Representation for Fast Homology Search}, journal = {J. Comput. Biol.}, volume = {14}, number = {5}, pages = {594--614}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.R005}, doi = {10.1089/CMB.2007.R005}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/CameronBW07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/ChenFBDKLKLK07, author = {Brian Y. Chen and Viacheslav Fofanov and Drew H. Bryant and Bradley D. Dodson and David M. Kristensen and Andreas Martin Lisewski and Marek Kimmel and Olivier Lichtarge and Lydia E. Kavraki}, title = {The {MASH} Pipeline for Protein Function Prediction and an Algorithm for the Geometric Refinement of 3D Motifs}, journal = {J. Comput. Biol.}, volume = {14}, number = {6}, pages = {791--816}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.R017}, doi = {10.1089/CMB.2007.R017}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/ChenFBDKLKLK07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/ChengD07, author = {Yongxi Cheng and Ding{-}Zhu Du}, title = {Efficient Constructions of Disjunct Matrices with Applications to {DNA} Library Screening}, journal = {J. Comput. Biol.}, volume = {14}, number = {9}, pages = {1208--1216}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0052}, doi = {10.1089/CMB.2007.0052}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/ChengD07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/ChennubhotlaB07, author = {Chakra Chennubhotla and Ivet Bahar}, title = {Markov Methods for Hierarchical Coarse-Graining of Large Protein Dynamics}, journal = {J. Comput. Biol.}, volume = {14}, number = {6}, pages = {765--776}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.R015}, doi = {10.1089/CMB.2007.R015}, timestamp = {Fri, 20 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/ChennubhotlaB07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/ChiangABHL07, author = {Tsung{-}Han Chiang and Mehmet Serkan Apaydin and Douglas L. Brutlag and David Hsu and Jean{-}Claude Latombe}, title = {Using Stochastic Roadmap Simulation to Predict Experimental Quantities in Protein Folding Kinetics: Folding Rates and Phi-Values}, journal = {J. Comput. Biol.}, volume = {14}, number = {5}, pages = {578--593}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.R004}, doi = {10.1089/CMB.2007.R004}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jcb/ChiangABHL07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/ChorT07, author = {Benny Chor and Tamir Tuller}, title = {Biological Networks: Comparison, Conservation, and Evolution via Relative Description Length}, journal = {J. Comput. Biol.}, volume = {14}, number = {6}, pages = {817--838}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.R018}, doi = {10.1089/CMB.2007.R018}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/ChorT07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/ChristodoulakisGIAS07, author = {Manolis Christodoulakis and Geoffrey Brian Golding and Costas S. Iliopoulos and Yoan Jos{\'{e}} Pinz{\'{o}}n Ardila and William F. Smyth}, title = {Efficient Algorithms for Counting and Reporting Segregating Sites in Genomic Sequences}, journal = {J. Comput. Biol.}, volume = {14}, number = {7}, pages = {1001--1010}, year = {2007}, url = {https://doi.org/10.1089/cmb.2006.0136}, doi = {10.1089/CMB.2006.0136}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/ChristodoulakisGIAS07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/DeforcheCLSMRVL07, author = {Koen Deforche and Ricardo Camacho and Kristel Van Laethem and Beth Shapiro and Yves Moreau and Andrew Rambaut and Anne{-}Mieke Vandamme and Philippe Lemey}, title = {Estimating the Relative Contribution of dNTP Pool Imbalance and {APOBEC3G/3F} Editing to {HIV} Evolution \emph{In Vivo}}, journal = {J. Comput. Biol.}, volume = {14}, number = {8}, pages = {1105--1114}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0073}, doi = {10.1089/CMB.2007.0073}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jcb/DeforcheCLSMRVL07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/DialloMB07, author = {Abdoulaye Banir{\'{e}} Diallo and Vladimir Makarenkov and Mathieu Blanchette}, title = {Exact and Heuristic Algorithms for the Indel Maximum Likelihood Problem}, journal = {J. Comput. Biol.}, volume = {14}, number = {4}, pages = {446--461}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.A006}, doi = {10.1089/CMB.2007.A006}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/DialloMB07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/DomanicP07, author = {Nevzat Onur Domani{\c{c}} and Franco P. Preparata}, title = {A Novel Approach to the Detection of Genomic Approximate Tandem Repeats in the Levenshtein Metric}, journal = {J. Comput. Biol.}, volume = {14}, number = {7}, pages = {873--891}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0018}, doi = {10.1089/CMB.2007.0018}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/DomanicP07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/EliasT07, author = {Isaac Elias and Tamir Tuller}, title = {Reconstruction of Ancestral Genomic Sequences Using Likelihood}, journal = {J. Comput. Biol.}, volume = {14}, number = {2}, pages = {216--237}, year = {2007}, url = {https://doi.org/10.1089/cmb.2006.0101}, doi = {10.1089/CMB.2006.0101}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/EliasT07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/Emmert-Streib07, author = {Frank Emmert{-}Streib}, title = {The Chronic Fatigue Syndrome: {A} Comparative Pathway Analysis}, journal = {J. Comput. Biol.}, volume = {14}, number = {7}, pages = {961--972}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0041}, doi = {10.1089/CMB.2007.0041}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/Emmert-Streib07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/FrenkelT07, author = {Zakharia M. Frenkel and Edward N. Trifonov}, title = {Evolutionary Networks in the Formatted Protein Sequence Space}, journal = {J. Comput. Biol.}, volume = {14}, number = {8}, pages = {1044--1057}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0066}, doi = {10.1089/CMB.2007.0066}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/FrenkelT07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/FuCVNZJ07, author = {Zheng Fu and Xin Chen and Vladimir Vacic and Peng Nan and Yang Zhong and Tao Jiang}, title = {{MSOAR:} {A} High-Throughput Ortholog Assignment System Based on Genome Rearrangement}, journal = {J. Comput. Biol.}, volume = {14}, number = {9}, pages = {1160--1175}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0048}, doi = {10.1089/CMB.2007.0048}, timestamp = {Wed, 22 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/FuCVNZJ07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/FussDDK07, author = {Hendrik Fu{\ss} and Werner Dubitzky and C. Stephen Downes and Mary Jo Kurth}, title = {Deactivation of Src Family Kinases: Hypothesis Testing Using a Monte Carlo Sensitivity Analysis of Systems-Level Properties}, journal = {J. Comput. Biol.}, volume = {14}, number = {9}, pages = {1185--1200}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0095}, doi = {10.1089/CMB.2007.0095}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/FussDDK07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/GronauM07, author = {Ilan Gronau and Shlomo Moran}, title = {Neighbor Joining Algorithms for Inferring Phylogenies via {LCA} Distances}, journal = {J. Comput. Biol.}, volume = {14}, number = {1}, pages = {1--15}, year = {2007}, url = {https://doi.org/10.1089/cmb.2006.0115}, doi = {10.1089/CMB.2006.0115}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/GronauM07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/GusfieldBBS07, author = {Dan Gusfield and Vikas Bansal and Vineet Bafna and Yun S. Song}, title = {A Decomposition Theory for Phylogenetic Networks and Incompatible Characters}, journal = {J. Comput. Biol.}, volume = {14}, number = {10}, pages = {1247--1272}, year = {2007}, url = {https://doi.org/10.1089/cmb.2006.0137}, doi = {10.1089/CMB.2006.0137}, timestamp = {Fri, 09 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/GusfieldBBS07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/HavukkalaV07, author = {Ilkka Havukkala and Stijn Vanderlooy}, title = {On the Reliable Identification of Plant Sequences Containing a Polyadenylation Site}, journal = {J. Comput. Biol.}, volume = {14}, number = {9}, pages = {1229--1245}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0058}, doi = {10.1089/CMB.2007.0058}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/HavukkalaV07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/HeckermanKL07, author = {David Heckerman and Carl Myers Kadie and Jennifer Listgarten}, title = {Leveraging Information Across {HLA} Alleles/Supertypes Improves Epitope Prediction}, journal = {J. Comput. Biol.}, volume = {14}, number = {6}, pages = {736--746}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.R013}, doi = {10.1089/CMB.2007.R013}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/HeckermanKL07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/HirschSL07, author = {Michael Hirsch and Stephen Swift and Xiaohui Liu}, title = {Optimal Search Space for Clustering Gene Expression Data via Consensus}, journal = {J. Comput. Biol.}, volume = {14}, number = {10}, pages = {1327--1341}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0153}, doi = {10.1089/CMB.2007.0153}, timestamp = {Wed, 20 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jcb/HirschSL07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/HuangMF07, author = {Jim C. Huang and Quaid Morris and Brendan J. Frey}, title = {Bayesian Inference of MicroRNA Targets from Sequence and Expression Data}, journal = {J. Comput. Biol.}, volume = {14}, number = {5}, pages = {550--563}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.R002}, doi = {10.1089/CMB.2007.R002}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/HuangMF07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/KaminskiB07, author = {Naftali Kaminski and Ziv Bar{-}Joseph}, title = {A Patient-Gene Model for Temporal Expression Profiles in Clinical Studies}, journal = {J. Comput. Biol.}, volume = {14}, number = {3}, pages = {324--338}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0001}, doi = {10.1089/CMB.2007.0001}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/KaminskiB07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/Kong07, author = {Yong Kong}, title = {Generalized Correlation Functions and Their Applications in Selection of Optimal Multiple Spaced Seeds for Homology Search}, journal = {J. Comput. Biol.}, volume = {14}, number = {2}, pages = {238--254}, year = {2007}, url = {https://doi.org/10.1089/cmb.2006.0008}, doi = {10.1089/CMB.2006.0008}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/Kong07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/KoyuturkSG07, author = {Mehmet Koyut{\"{u}}rk and Wojciech Szpankowski and Ananth Grama}, title = {Assessing Significance of Connectivity and Conservation in Protein Interaction Networks}, journal = {J. Comput. Biol.}, volume = {14}, number = {6}, pages = {747--764}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.R014}, doi = {10.1089/CMB.2007.R014}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/KoyuturkSG07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/LajoieBEG07, author = {Mathieu Lajoie and Denis Bertrand and Nadia El{-}Mabrouk and Olivier Gascuel}, title = {Duplication and Inversion History of a Tandemly Repeated Genes Family}, journal = {J. Comput. Biol.}, volume = {14}, number = {4}, pages = {462--478}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.A007}, doi = {10.1089/CMB.2007.A007}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/LajoieBEG07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/LeesRSG07, author = {Karen Lees and Stephen J. Roberts and Pari Skamnioti and Sarah J. Gurr}, title = {Gene Microarray Analysis Using Angular Distribution Decomposition}, journal = {J. Comput. Biol.}, volume = {14}, number = {1}, pages = {68--83}, year = {2007}, url = {https://doi.org/10.1089/cmb.2006.0098}, doi = {10.1089/CMB.2006.0098}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/LeesRSG07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/LevyRLHCCS07, author = {Dan Levy and Christopher Reeder and Bradford Loucas and Lynn Hlatky and Allen M. Chen and Michael Cornforth and Rainer K. Sachs}, title = {Interpreting Chromosome Aberration Spectra}, journal = {J. Comput. Biol.}, volume = {14}, number = {2}, pages = {144--155}, year = {2007}, url = {https://doi.org/10.1089/cmb.2006.0127}, doi = {10.1089/CMB.2006.0127}, timestamp = {Wed, 25 Nov 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/LevyRLHCCS07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/LiVSWL07, author = {Haifeng Li and Anton Valouev and David C. Schwartz and Michael S. Waterman and Lei M. Li}, title = {A Quantile Method for Sizing Optical Maps}, journal = {J. Comput. Biol.}, volume = {14}, number = {3}, pages = {255--266}, year = {2007}, url = {https://doi.org/10.1089/cmb.2006.0006}, doi = {10.1089/CMB.2006.0006}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/LiVSWL07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/LubomirskiDBCDA07, author = {Mariusz Lubomirski and Michael R. D'Andrea and Stanley M. Belkowski and Javier Cabrera and James M. Dixon and Dhammika Amaratunga}, title = {A Consolidated Approach to Analyzing Data from High-Throughput Protein Microarrays with an Application to Immune Response Profiling in Humans}, journal = {J. Comput. Biol.}, volume = {14}, number = {3}, pages = {350--359}, year = {2007}, url = {https://doi.org/10.1089/cmb.2006.0116}, doi = {10.1089/CMB.2006.0116}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/LubomirskiDBCDA07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/MartinGWFRP07, author = {Francis L. Martin and Matthew J. German and Ernst Wit and Thomas Fearn and Narasimhan Ragavan and Hubert M. Pollock}, title = {Identifying Variables Responsible for Clustering in Discriminant Analysis of Data from Infrared Microspectroscopy of a Biological Sample}, journal = {J. Comput. Biol.}, volume = {14}, number = {9}, pages = {1176--1184}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0057}, doi = {10.1089/CMB.2007.0057}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/MartinGWFRP07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/MesserBVA07, author = {Philipp W. Messer and Ralf Bundschuh and Martin Vingron and Peter F. Arndt}, title = {Effects of Long-Range Correlations in {DNA} on Sequence Alignment Score Statistics}, journal = {J. Comput. Biol.}, volume = {14}, number = {5}, pages = {655--668}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.R008}, doi = {10.1089/CMB.2007.R008}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/MesserBVA07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/NarayananK07, author = {Manikandan Narayanan and Richard M. Karp}, title = {Comparing Protein Interaction Networks via a Graph Match-and-Split Algorithm}, journal = {J. Comput. Biol.}, volume = {14}, number = {7}, pages = {892--907}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0025}, doi = {10.1089/CMB.2007.0025}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/NarayananK07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/Ozery-FlatoS07, author = {Michal Ozery{-}Flato and Ron Shamir}, title = {Sorting by Reciprocal Translocations via Reversals Theory}, journal = {J. Comput. Biol.}, volume = {14}, number = {4}, pages = {408--422}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.A003}, doi = {10.1089/CMB.2007.A003}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/Ozery-FlatoS07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/Parida07, author = {Laxmi Parida}, title = {Gapped Permutation Pattern Discovery for Gene Order Comparisons}, journal = {J. Comput. Biol.}, volume = {14}, number = {1}, pages = {45--55}, year = {2007}, url = {https://doi.org/10.1089/cmb.2006.0103}, doi = {10.1089/CMB.2006.0103}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/Parida07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/Parida07a, author = {Laxmi Parida}, title = {Discovering Topological Motifs Using a Compact Notation}, journal = {J. Comput. Biol.}, volume = {14}, number = {3}, pages = {300--323}, year = {2007}, url = {https://doi.org/10.1089/cmb.2006.0142}, doi = {10.1089/CMB.2006.0142}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/Parida07a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/Parida07b, author = {Laxmi Parida}, title = {Statistical Significance of Large Gene Clusters}, journal = {J. Comput. Biol.}, volume = {14}, number = {9}, pages = {1145--1159}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0064}, doi = {10.1089/CMB.2007.0064}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/Parida07b.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/PattengaleGM07, author = {Nicholas D. Pattengale and Eric J. Gottlieb and Bernard M. E. Moret}, title = {Efficiently Computing the Robinson-Foulds Metric}, journal = {J. Comput. Biol.}, volume = {14}, number = {6}, pages = {724--735}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.R012}, doi = {10.1089/CMB.2007.R012}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/PattengaleGM07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/Przytycka07, author = {Teresa M. Przytycka}, title = {Stability of Characters and Construction of Phylogenetic Trees}, journal = {J. Comput. Biol.}, volume = {14}, number = {5}, pages = {539--549}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.R001}, doi = {10.1089/CMB.2007.R001}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/Przytycka07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/RastegariC07, author = {Baharak Rastegari and Anne Condon}, title = {Parsing Nucleic Acid Pseudoknotted Secondary Structure: Algorithm and Applications}, journal = {J. Comput. Biol.}, volume = {14}, number = {1}, pages = {16--32}, year = {2007}, url = {https://doi.org/10.1089/cmb.2006.0108}, doi = {10.1089/CMB.2006.0108}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/RastegariC07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/RempalaRKT07, author = {Grzegorz A. Rempala and Kenneth S. Ramos and Ted Kalbfleisch and Ivo Teneng}, title = {Validation of a Mathematical Model of Gene Transcription in Aggregated Cellular Systems: Application to {L1} Retrotransposition}, journal = {J. Comput. Biol.}, volume = {14}, number = {3}, pages = {339--349}, year = {2007}, url = {https://doi.org/10.1089/cmb.2006.0125}, doi = {10.1089/CMB.2006.0125}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/RempalaRKT07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/Rosenberg07, author = {Noah A. Rosenberg}, title = {Counting Coalescent Histories}, journal = {J. Comput. Biol.}, volume = {14}, number = {3}, pages = {360--377}, year = {2007}, url = {https://doi.org/10.1089/cmb.2006.0109}, doi = {10.1089/CMB.2006.0109}, timestamp = {Sat, 30 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jcb/Rosenberg07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/SahaWKROMV07, author = {Nilanjan Saha and Layne T. Watson and Karen Kafadar and Naren Ramakrishnan and Alexey Onufriev and Shrinivasrao P. Mane and Cecilia Vasquez{-}Robinet}, title = {Validation and Estimation of Parameters for a General Probabilistic Model of the {PCR} Process}, journal = {J. Comput. Biol.}, volume = {14}, number = {1}, pages = {97--112}, year = {2007}, url = {https://doi.org/10.1089/cmb.2006.0123}, doi = {10.1089/CMB.2006.0123}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/SahaWKROMV07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/ScheidS07, author = {Stefanie Scheid and Rainer Spang}, title = {Compensating for Unknown Confounders in Microarray Data Analysis Using Filtered Permutations}, journal = {J. Comput. Biol.}, volume = {14}, number = {5}, pages = {669--681}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.R009}, doi = {10.1089/CMB.2007.R009}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/ScheidS07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/SchmidlerLO07, author = {Scott C. Schmidler and Joseph E. Lucas and Terrence G. Oas}, title = {Statistical Estimation of Statistical Mechanical Models: Helix-Coil Theory and Peptide Helicity Prediction}, journal = {J. Comput. Biol.}, volume = {14}, number = {10}, pages = {1287--1310}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0008}, doi = {10.1089/CMB.2007.0008}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jcb/SchmidlerLO07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/ShiMDQB07, author = {Yi Y. Shi and Gerald A. Miller and Oleg Denisenko and Hong Qian and Karol Bomsztyk}, title = {Quantitative Model for Binary Measurements of Protein-Protein Interactions}, journal = {J. Comput. Biol.}, volume = {14}, number = {7}, pages = {1011--1023}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0024}, doi = {10.1089/CMB.2007.0024}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/ShiMDQB07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/Shibuya07, author = {Tetsuo Shibuya}, title = {Efficient Substructure {RMSD} Query Algorithms}, journal = {J. Comput. Biol.}, volume = {14}, number = {9}, pages = {1201--1207}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0079}, doi = {10.1089/CMB.2007.0079}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/Shibuya07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/SiebertB07, author = {Sven Siebert and Rolf Backofen}, title = {A Dynamic Programming Approach for Finding Common Patterns in RNAs}, journal = {J. Comput. Biol.}, volume = {14}, number = {1}, pages = {33--44}, year = {2007}, url = {https://doi.org/10.1089/cmb.2006.0089}, doi = {10.1089/CMB.2006.0089}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/SiebertB07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/SongDGLW07, author = {Yun S. Song and Zhihong Ding and Dan Gusfield and Charles H. Langley and Yufeng Wu}, title = {Algorithms to Distinguish the Role of Gene-Conversion from Single-Crossover Recombination in the Derivation of {SNP} Sequences in Populations}, journal = {J. Comput. Biol.}, volume = {14}, number = {10}, pages = {1273--1286}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0096}, doi = {10.1089/CMB.2007.0096}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/SongDGLW07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/SongSD07, author = {Nan Song and R. D. Sedgewick and Dannie Durand}, title = {Domain Architecture Comparison for Multidomain Homology Identification}, journal = {J. Comput. Biol.}, volume = {14}, number = {4}, pages = {496--516}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.A009}, doi = {10.1089/CMB.2007.A009}, timestamp = {Sat, 30 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jcb/SongSD07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/StefankovicV07, author = {Daniel Stefankovic and Eric Vigoda}, title = {Phylogeny of Mixture Models: Robustness of Maximum Likelihood and Non-Identifiable Distributions}, journal = {J. Comput. Biol.}, volume = {14}, number = {2}, pages = {156--189}, year = {2007}, url = {https://doi.org/10.1089/cmb.2006.0126}, doi = {10.1089/CMB.2006.0126}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/StefankovicV07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/SternerSB07, author = {Beckett W. Sterner and Rohit Singh and Bonnie Berger}, title = {Predicting and Annotating Catalytic Residues: An Information Theoretic Approach}, journal = {J. Comput. Biol.}, volume = {14}, number = {8}, pages = {1058--1073}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0042}, doi = {10.1089/CMB.2007.0042}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jcb/SternerSB07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/StojmirovicY07, author = {Aleksandar Stojmirovic and Yi{-}Kuo Yu}, title = {Information Flow in Interaction Networks}, journal = {J. Comput. Biol.}, volume = {14}, number = {8}, pages = {1115--1143}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0069}, doi = {10.1089/CMB.2007.0069}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/StojmirovicY07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/ThanRIN07, author = {Cuong Than and Derek A. Ruths and Hideki Innan and Luay Nakhleh}, title = {Confounding Factors in {HGT} Detection: Statistical Error, Coalescent Effects, and Multiple Solutions}, journal = {J. Comput. Biol.}, volume = {14}, number = {4}, pages = {517--535}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.A010}, doi = {10.1089/CMB.2007.A010}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jcb/ThanRIN07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/ThomasTTA07, author = {Shawna L. Thomas and Xinyu Tang and Lydia Tapia and Nancy M. Amato}, title = {Simulating Protein Motions with Rigidity Analysis}, journal = {J. Comput. Biol.}, volume = {14}, number = {6}, pages = {839--855}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.R019}, doi = {10.1089/CMB.2007.R019}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/ThomasTTA07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/TreschBSKPB07, author = {Achim Tresch and Tim Bei{\ss}barth and Holger S{\"{u}}ltmann and Ruprecht Kuner and Annemarie Poustka and Andreas Buness}, title = {Discrimination of Direct and Indirect Interactions in a Network of Regulatory Effects}, journal = {J. Comput. Biol.}, volume = {14}, number = {9}, pages = {1217--1228}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0085}, doi = {10.1089/CMB.2007.0085}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/TreschBSKPB07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/Veksler-LublinskyZBK07, author = {Isana Veksler{-}Lublinsky and Michal Ziv{-}Ukelson and Danny Barash and Klara Kedem}, title = {A Structure-Based Flexible Search Method for Motifs in {RNA}}, journal = {J. Comput. Biol.}, volume = {14}, number = {7}, pages = {908--926}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0061}, doi = {10.1089/CMB.2007.0061}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/Veksler-LublinskyZBK07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/WaldispuhlC07, author = {J{\'{e}}r{\^{o}}me Waldisp{\"{u}}hl and Peter Clote}, title = {Computing the Partition Function and Sampling for Saturated Secondary Structures of RNA, with Respect to the Turner Energy Model}, journal = {J. Comput. Biol.}, volume = {14}, number = {2}, pages = {190--215}, year = {2007}, url = {https://doi.org/10.1089/cmb.2006.0012}, doi = {10.1089/CMB.2006.0012}, timestamp = {Tue, 07 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jcb/WaldispuhlC07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/WexlerZZ07, author = {Ydo Wexler and Chaya Ben{-}Zaken Zilberstein and Michal Ziv{-}Ukelson}, title = {A Study of Accessible Motifs and {RNA} Folding Complexity}, journal = {J. Comput. Biol.}, volume = {14}, number = {6}, pages = {856--872}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.R020}, doi = {10.1089/CMB.2007.R020}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/WexlerZZ07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/WojtowiczT07, author = {Damian W{\'{o}}jtowicz and Jerzy Tiuryn}, title = {Evolution of Gene Families Based on Gene Duplication, Loss, Accumulated Change, and Innovation}, journal = {J. Comput. Biol.}, volume = {14}, number = {4}, pages = {479--495}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.A008}, doi = {10.1089/CMB.2007.A008}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/WojtowiczT07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/WuTE07, author = {Xue Wu and Chau{-}Wen Tseng and Nathan Edwards}, title = {HMMatch: Peptide Identification by Spectral Matching of Tandem Mass Spectra Using Hidden Markov Models}, journal = {J. Comput. Biol.}, volume = {14}, number = {8}, pages = {1025--1043}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0071}, doi = {10.1089/CMB.2007.0071}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/WuTE07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/XieS07, author = {Wei Xie and Nikolaos V. Sahinidis}, title = {A Reduction-Based Exact Algorithm for the Contact Map Overlap Problem}, journal = {J. Comput. Biol.}, volume = {14}, number = {5}, pages = {637--654}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.R007}, doi = {10.1089/CMB.2007.R007}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/XieS07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/XingJS07, author = {Eric P. Xing and Michael I. Jordan and Roded Sharan}, title = {Bayesian Haplotype Inference via the Dirichlet Process}, journal = {J. Comput. Biol.}, volume = {14}, number = {3}, pages = {267--284}, year = {2007}, url = {https://doi.org/10.1089/cmb.2006.0102}, doi = {10.1089/CMB.2006.0102}, timestamp = {Sat, 05 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jcb/XingJS07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/XuJB07, author = {Jinbo Xu and Feng Jiao and Bonnie Berger}, title = {A Parameterized Algorithm for Protein Structure Alignment}, journal = {J. Comput. Biol.}, volume = {14}, number = {5}, pages = {564--577}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.R003}, doi = {10.1089/CMB.2007.R003}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/XuJB07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/XuZS07, author = {Wei Xu and Chunfang Zheng and David Sankoff}, title = {Paths and Cycles in Breakpoint Graph of Random Multichromosomal Genomes}, journal = {J. Comput. Biol.}, volume = {14}, number = {4}, pages = {423--435}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.A004}, doi = {10.1089/CMB.2007.A004}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/XuZS07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/YangS07, author = {Qingwu Yang and Sing{-}Hoi Sze}, title = {Path Matching and Graph Matching in Biological Networks}, journal = {J. Comput. Biol.}, volume = {14}, number = {1}, pages = {56--67}, year = {2007}, url = {https://doi.org/10.1089/cmb.2006.0076}, doi = {10.1089/CMB.2006.0076}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/YangS07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/YeFB07, author = {Xiaoduan Ye and Alan M. Friedman and Chris Bailey{-}Kellogg}, title = {Hypergraph Model of Multi-Residue Interactions in Proteins: Sequentially-Constrained Partitioning Algorithms for Optimization of Site-Directed Protein Recombination}, journal = {J. Comput. Biol.}, volume = {14}, number = {6}, pages = {777--790}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.R016}, doi = {10.1089/CMB.2007.R016}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/YeFB07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/ZeiserML07, author = {Stefan Zeiser and Johannes M{\"{u}}ller and Volkmar Liebscher}, title = {Modeling the Hes1 Oscillator}, journal = {J. Comput. Biol.}, volume = {14}, number = {7}, pages = {984--1000}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0029}, doi = {10.1089/CMB.2007.0029}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/ZeiserML07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/ZhangW07, author = {Liqing Zhang and Layne T. Watson}, title = {Note on the Computation of Critical Effective Population Sizes}, journal = {J. Comput. Biol.}, volume = {14}, number = {7}, pages = {950--960}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0007}, doi = {10.1089/CMB.2007.0007}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/ZhangW07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/ZhouF07, author = {Leming Zhou and Liliana Florea}, title = {Designing Sensitive and Specific Spaced Seeds for Cross-Species mRNA-to-Genome Alignment}, journal = {J. Comput. Biol.}, volume = {14}, number = {2}, pages = {113--130}, year = {2007}, url = {https://doi.org/10.1089/cmb.2006.0130}, doi = {10.1089/CMB.2006.0130}, timestamp = {Sat, 30 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jcb/ZhouF07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/Zhu07, author = {Binhai Zhu}, title = {Protein Local Structure Alignment Under the Discrete Fr{\'{e}}chet Distance}, journal = {J. Comput. Biol.}, volume = {14}, number = {10}, pages = {1343--1351}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.0156}, doi = {10.1089/CMB.2007.0156}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/Zhu07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/ZhuH07, author = {Dongxiao Zhu and Alfred O. Hero III}, title = {Bayesian Hierarchical Model for Large-Scale Covariance Matrix Estimation}, journal = {J. Comput. Biol.}, volume = {14}, number = {10}, pages = {1311--1326}, year = {2007}, url = {https://doi.org/10.1089/cmb.2006.0151}, doi = {10.1089/CMB.2006.0151}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/ZhuH07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
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