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@inproceedings{DBLP:conf/wabi/AlbertDDKSZW07,
  author       = {R{\'{e}}ka Albert and
                  Bhaskar DasGupta and
                  Riccardo Dondi and
                  Sema Kachalo and
                  Eduardo D. Sontag and
                  Alexander Zelikovsky and
                  Kelly Westbrooks},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {A Novel Method for Signal Transduction Network Inference from Indirect
                  Experimental Evidence},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {407--419},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_38},
  doi          = {10.1007/978-3-540-74126-8\_38},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/AlbertDDKSZW07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/ApostolicoT07,
  author       = {Alberto Apostolico and
                  Claudia Tagliacollo},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Incremental Discovery of Irredundant Motif Bases in Time \emph{O}({\(\vert\)}\emph{Sigma}{\(\vert\)}
                  \emph{n}\({}^{\mbox{2}}\) log \emph{n})},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {136--148},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_13},
  doi          = {10.1007/978-3-540-74126-8\_13},
  timestamp    = {Thu, 25 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/ApostolicoT07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/BansalE07,
  author       = {Mukul S. Bansal and
                  Oliver Eulenstein},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {An \emph{Omega}(\emph{n}\({}^{\mbox{2}}\)/log \emph{n}) Speed-Up of
                  {TBR} Heuristics for the Gene-Duplication Problem},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {124--135},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_12},
  doi          = {10.1007/978-3-540-74126-8\_12},
  timestamp    = {Thu, 25 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/BansalE07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/BirinGET07,
  author       = {Hadas Birin and
                  Zohar Gal{-}Or and
                  Isaac Elias and
                  Tamir Tuller},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Inferring Models of Rearrangements, Recombinations, and Horizontal
                  Transfers by the Minimum Evolution Criterion},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {111--123},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_11},
  doi          = {10.1007/978-3-540-74126-8\_11},
  timestamp    = {Thu, 25 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/BirinGET07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/BoucherBC07,
  author       = {Christina Boucher and
                  Daniel G. Brown and
                  Paul Church},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {A Graph Clustering Approach to Weak Motif Recognition},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {149--160},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_14},
  doi          = {10.1007/978-3-540-74126-8\_14},
  timestamp    = {Thu, 25 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/BoucherBC07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/Bucan07,
  author       = {Maja Bucan},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Novel Approaches in Psychiatric Genomics},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {371},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_34},
  doi          = {10.1007/978-3-540-74126-8\_34},
  timestamp    = {Thu, 25 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/Bucan07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/ChinLSY07,
  author       = {Francis Y. L. Chin and
                  Henry C. M. Leung and
                  Wing{-}Kin Sung and
                  Siu{-}Ming Yiu},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {The Point Placement Problem on a Line - Improved Bounds for Pairwise
                  Distance Queries},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {372--382},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_35},
  doi          = {10.1007/978-3-540-74126-8\_35},
  timestamp    = {Thu, 25 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/ChinLSY07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/ChoiZZS07,
  author       = {Vicky Choi and
                  Chunfang Zheng and
                  Qian Zhu and
                  David Sankoff},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Algorithms for the Extraction of Synteny Blocks from Comparative Maps},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {277--288},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_26},
  doi          = {10.1007/978-3-540-74126-8\_26},
  timestamp    = {Sat, 26 Dec 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/wabi/ChoiZZS07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/DavilaBR07,
  author       = {Jaime I. D{\'{a}}vila and
                  Sudha Balla and
                  Sanguthevar Rajasekaran},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Fast Algorithms for Selecting Specific siRNA in Complete mRNA Data},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {302--309},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_28},
  doi          = {10.1007/978-3-540-74126-8\_28},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/DavilaBR07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/DhanikYMPKLBL07,
  author       = {Ankur Dhanik and
                  Peggy Yao and
                  Nathan Marz and
                  Ryan Propper and
                  Charles Kou and
                  Guanfeng Liu and
                  Henry van den Bedem and
                  Jean{-}Claude Latombe},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Efficient Algorithms to Explore Conformation Spaces of Flexible Protein
                  Loops},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {265--276},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_25},
  doi          = {10.1007/978-3-540-74126-8\_25},
  timestamp    = {Thu, 07 Nov 2019 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/wabi/DhanikYMPKLBL07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/DundasBDL07,
  author       = {Joe Dundas and
                  T. Andrew Binkowski and
                  Bhaskar DasGupta and
                  Jie Liang},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Topology Independent Protein Structural Alignment},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {171--182},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_16},
  doi          = {10.1007/978-3-540-74126-8\_16},
  timestamp    = {Thu, 25 Nov 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/wabi/DundasBDL07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/GenoveseGP07,
  author       = {Loredana M. Genovese and
                  Filippo Geraci and
                  Marco Pellegrini},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {A Fast and Accurate Heuristic for the Single Individual {SNP} Haplotyping
                  Problem with Many Gaps, High Reading Error Rate and Low Coverage},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {49--60},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_6},
  doi          = {10.1007/978-3-540-74126-8\_6},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/GenoveseGP07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/HeathP07,
  author       = {Lenwood S. Heath and
                  Amrita Pati},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Genomic Signatures in De Bruijn Chains},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {216--227},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_21},
  doi          = {10.1007/978-3-540-74126-8\_21},
  timestamp    = {Thu, 25 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/HeathP07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/IlieI07,
  author       = {Lucian Ilie and
                  Silvana Ilie},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Fast Computation of Good Multiple Spaced Seeds},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {346--358},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_32},
  doi          = {10.1007/978-3-540-74126-8\_32},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/IlieI07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/JabbariCPPZ07,
  author       = {Hosna Jabbari and
                  Anne Condon and
                  Ana Pop and
                  Cristina Pop and
                  Yinglei Zhao},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {HFold: {RNA} Pseudoknotted Secondary Structure Prediction Using Hierarchical
                  Folding},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {323--334},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_30},
  doi          = {10.1007/978-3-540-74126-8\_30},
  timestamp    = {Mon, 01 May 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/JabbariCPPZ07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/JeongBP07,
  author       = {Jieun K. Jeong and
                  Piotr Berman and
                  Teresa M. Przytycka},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Bringing Folding Pathways into Strand Pairing Prediction},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {38--48},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_5},
  doi          = {10.1007/978-3-540-74126-8\_5},
  timestamp    = {Thu, 25 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/JeongBP07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/KennedyMP07,
  author       = {Justin Kennedy and
                  Ion I. Mandoiu and
                  Bogdan Pasaniuc},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Genotype Error Detection Using Hidden Markov Models of Haplotype Diversity},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {73--84},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_8},
  doi          = {10.1007/978-3-540-74126-8\_8},
  timestamp    = {Thu, 25 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/KennedyMP07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/KimK07,
  author       = {Eagu Kim and
                  John D. Kececioglu},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Inverse Sequence Alignment from Partial Examples},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {359--370},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_33},
  doi          = {10.1007/978-3-540-74126-8\_33},
  timestamp    = {Thu, 25 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/KimK07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/KohTHT07,
  author       = {Geoffrey Koh and
                  Lisa Tucker{-}Kellogg and
                  David Hsu and
                  P. S. Thiagarajan},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Composing Globally Consistent Pathway Parameter Estimates Through
                  Belief Propagation},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {420--430},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_39},
  doi          = {10.1007/978-3-540-74126-8\_39},
  timestamp    = {Wed, 25 Sep 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/KohTHT07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/KuksaP07,
  author       = {Pavel P. Kuksa and
                  Vladimir Pavlovic},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Fast Kernel Methods for {SVM} Sequence Classifiers},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {228--239},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_22},
  doi          = {10.1007/978-3-540-74126-8\_22},
  timestamp    = {Tue, 11 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/KuksaP07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/LangmeadJ07,
  author       = {Christopher James Langmead and
                  Sumit Kumar Jha},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Predicting Protein Folding Kinetics Via Temporal Logic Model Checking},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {252--264},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_24},
  doi          = {10.1007/978-3-540-74126-8\_24},
  timestamp    = {Sun, 25 Jul 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/LangmeadJ07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/LeeS07,
  author       = {Phil Hyoun Lee and
                  Hagit Shatkay},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Two Birds, One Stone: Selecting Functionally Informative Tag SNPs
                  for Disease Association Studies},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {61--72},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_7},
  doi          = {10.1007/978-3-540-74126-8\_7},
  timestamp    = {Thu, 25 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/LeeS07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/LiuSS07,
  author       = {Chunmei Liu and
                  Yinglei Song and
                  Louis W. Shapiro},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {{RNA} Folding Including Pseudoknots: {A} New Parameterized Algorithm
                  and Improved Upper Bound},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {310--322},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_29},
  doi          = {10.1007/978-3-540-74126-8\_29},
  timestamp    = {Thu, 25 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/LiuSS07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/LozanoPRVZ07,
  author       = {Antoni Lozano and
                  Ron Y. Pinter and
                  Oleg Rokhlenko and
                  Gabriel Valiente and
                  Michal Ziv{-}Ukelson},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Seeded Tree Alignment and Planar Tanglegram Layout},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {98--110},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_10},
  doi          = {10.1007/978-3-540-74126-8\_10},
  timestamp    = {Sat, 16 Sep 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/LozanoPRVZ07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/MedvedevGMB07,
  author       = {Paul Medvedev and
                  Konstantinos Georgiou and
                  Gene Myers and
                  Michael Brudno},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Computability of Models for Sequence Assembly},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {289--301},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_27},
  doi          = {10.1007/978-3-540-74126-8\_27},
  timestamp    = {Thu, 25 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/MedvedevGMB07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/MosigCS07,
  author       = {Axel Mosig and
                  Julian J.{-}L. Chen and
                  Peter F. Stadler},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Homology Search with Fragmented Nucleic Acid Sequence Patterns},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {335--345},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_31},
  doi          = {10.1007/978-3-540-74126-8\_31},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/wabi/MosigCS07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/NicosiaS07,
  author       = {Giuseppe Nicosia and
                  Giovanni Stracquadanio},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Generalized Pattern Search and Mesh Adaptive Direct Search Algorithms
                  for Protein Structure Prediction},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {183--193},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_17},
  doi          = {10.1007/978-3-540-74126-8\_17},
  timestamp    = {Thu, 25 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/NicosiaS07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/OzerR07,
  author       = {Hatice Gulcin Ozer and
                  William C. Ray},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Informative Motifs in Protein Family Alignments},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {161--170},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_15},
  doi          = {10.1007/978-3-540-74126-8\_15},
  timestamp    = {Thu, 25 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/OzerR07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/PerteaS07,
  author       = {Mihaela Pertea and
                  Steven Salzberg},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Using Protein Domains to Improve the Accuracy of \emph{Ab Initio}
                  Gene Finding},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {208--215},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_20},
  doi          = {10.1007/978-3-540-74126-8\_20},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/wabi/PerteaS07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/Pevzner07,
  author       = {Pavel A. Pevzner},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Shotgun Protein Sequencing},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {1},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_1},
  doi          = {10.1007/978-3-540-74126-8\_1},
  timestamp    = {Thu, 25 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/Pevzner07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/RastasU07,
  author       = {Pasi Rastas and
                  Esko Ukkonen},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Haplotype Inference Via Hierarchical Genotype Parsing},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {85--97},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_9},
  doi          = {10.1007/978-3-540-74126-8\_9},
  timestamp    = {Sat, 16 Sep 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/RastasU07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/SchliepK07,
  author       = {Alexander Schliep and
                  Roland Krause},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Efficient Computational Design of Tiling Arrays Using a Shortest Path
                  Approach},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {383--394},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_36},
  doi          = {10.1007/978-3-540-74126-8\_36},
  timestamp    = {Thu, 25 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/SchliepK07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/SramekBV07,
  author       = {Rastislav Sr{\'{a}}mek and
                  Brona Brejov{\'{a}} and
                  Tom{\'{a}}s Vinar},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {On-Line Viterbi Algorithm for Analysis of Long Biological Sequences},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {240--251},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_23},
  doi          = {10.1007/978-3-540-74126-8\_23},
  timestamp    = {Thu, 25 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/SramekBV07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/TsivtsivadzeBS07,
  author       = {Evgeni Tsivtsivadze and
                  Jorma Boberg and
                  Tapio Salakoski},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Locality Kernels for Protein Classification},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {2--11},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_2},
  doi          = {10.1007/978-3-540-74126-8\_2},
  timestamp    = {Thu, 25 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/TsivtsivadzeBS07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/VarshavskyFML07,
  author       = {Roy Varshavsky and
                  Menachem Fromer and
                  Amit Man and
                  Michal Linial},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {When Less Is More: Improving Classification of Protein Families with
                  a Minimal Set of Global Features},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {12--24},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_3},
  doi          = {10.1007/978-3-540-74126-8\_3},
  timestamp    = {Sat, 05 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/VarshavskyFML07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/VassuraMLMFC07,
  author       = {Marco Vassura and
                  Luciano Margara and
                  Pietro di Lena and
                  Filippo Medri and
                  Piero Fariselli and
                  Rita Casadio},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Fault Tolerance for Large Scale Protein 3D Reconstruction from Contact
                  Maps},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {25--37},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_4},
  doi          = {10.1007/978-3-540-74126-8\_4},
  timestamp    = {Fri, 09 Apr 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/VassuraMLMFC07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/WangS07,
  author       = {Xueyi Wang and
                  Jack Snoeyink},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Defining and Computing Optimum {RMSD} for Gapped Multiple Structure
                  Alignment},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {196--207},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_19},
  doi          = {10.1007/978-3-540-74126-8\_19},
  timestamp    = {Thu, 25 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/WangS07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/WuBCL07,
  author       = {Yonghui Wu and
                  Prasanna Bhat and
                  Timothy J. Close and
                  Stefano Lonardi},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Efficient and Accurate Construction of Genetic Linkage Maps from Noisy
                  and Missing Genotyping Data},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {395--406},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_37},
  doi          = {10.1007/978-3-540-74126-8\_37},
  timestamp    = {Sat, 05 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/WuBCL07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wabi/ZhiSB07,
  author       = {Degui Zhi and
                  Maxim Shatsky and
                  Steven E. Brenner},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Alignment-Free Local Structural Search by Writhe Decomposition},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {194--195},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_18},
  doi          = {10.1007/978-3-540-74126-8\_18},
  timestamp    = {Thu, 25 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/ZhiSB07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@proceedings{DBLP:conf/wabi/2007,
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8},
  doi          = {10.1007/978-3-540-74126-8},
  isbn         = {978-3-540-74125-1},
  timestamp    = {Tue, 14 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/2007.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
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