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@article{DBLP:journals/bmcbi/0002W10,
author = {Hao Zheng and
Hongwei Wu},
title = {Gene-centric association analysis for the correlation between the
guanine-cytosine content levels and temperature range conditions of
prokaryotic species},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-11}},
pages = {S7},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S11-S7},
doi = {10.1186/1471-2105-11-S11-S7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/0002W10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AbeelLMAPDS10,
author = {Thomas Abeel and
Sofie Van Landeghem and
Roser Morante and
Vincent Van Asch and
Yves Van de Peer and
Walter Daelemans and
Yvan Saeys},
title = {Highlights of the BioTM 2010 workshop on advances in bio text mining},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-5}},
pages = {I1},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S5-I1},
doi = {10.1186/1471-2105-11-S5-I1},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/AbeelLMAPDS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AdamsHJJLH10,
author = {Rachel M. Adams and
Jason B. Harris and
Jeremy J. Jay and
Beth G. Johnson and
Miriam L. Land and
Loren J. Hauser},
title = {Developing measures for microbial genome assembly quality control},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P14},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P14},
doi = {10.1186/1471-2105-11-S4-P14},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AdamsHJJLH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AdkinsKZPTS10,
author = {Ronald M. Adkins and
Julia Krushkal and
Steven Zeisel and
Chandrika Piyathilake and
Fran Tylavsky and
Grant Somes},
title = {Association of genomewide newborn {DNA} methylation patterns with
maternal and newborn characteristics},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {O4},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-O4},
doi = {10.1186/1471-2105-11-S4-O4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AdkinsKZPTS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AfganBCCNT10,
author = {Enis Afgan and
Dannon Baker and
Nathan Coraor and
Brad Chapman and
Anton Nekrutenko and
James Taylor},
title = {Galaxy CloudMan: delivering cloud compute clusters},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-12}},
pages = {S4},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S12-S4},
doi = {10.1186/1471-2105-11-S12-S4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AfganBCCNT10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AgarwalVBS10,
author = {Sumeet Agarwal and
Candida Vaz and
Alok Bhattacharya and
Ashwin Srinivasan},
title = {Prediction of novel precursor miRNAs using a context-sensitive hidden
Markov model {(CSHMM)}},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {29},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S29},
doi = {10.1186/1471-2105-11-S1-S29},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/AgarwalVBS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Al-NasrSH10,
author = {Kamal Al{-}Nasr and
Weitao Sun and
Jing He},
title = {Structure prediction for the helical skeletons detected from the low
resolution protein density map},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {44},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S44},
doi = {10.1186/1471-2105-11-S1-S44},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Al-NasrSH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AminianSB10,
author = {Minoo Aminian and
Amina Shabbeer and
Kristin P. Bennett},
title = {A conformal Bayesian network for classification of \emph{Mycobacterium
tuberculosis} complex lineages},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-3}},
pages = {4},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S3-S4},
doi = {10.1186/1471-2105-11-S3-S4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AminianSB10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AmmariMNP10,
author = {Mais G. Ammari and
Fiona M. McCarthy and
Bindu Nanduri and
Lesya M. Pinchuk},
title = {Analysis of Bovine Viral Diarrhea Viruses-infected monocytes: identification
of cytopathic and non-cytopathic biotype differences},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S9},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S9},
doi = {10.1186/1471-2105-11-S6-S9},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AmmariMNP10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Antao10,
author = {Tiago Antao},
title = {interPopula: a Python {API} to access the HapMap Project dataset},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-12}},
pages = {S10},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S12-S10},
doi = {10.1186/1471-2105-11-S12-S10},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Antao10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AntezanaVMMK10,
author = {Erick Antezana and
Aravind Venkatesan and
Chris Mungall and
Vladimir Mironov and
Martin Kuiper},
title = {ONTO-ToolKit: enabling bio-ontology engineering via Galaxy},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-12}},
pages = {S8},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S12-S8},
doi = {10.1186/1471-2105-11-S12-S8},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AntezanaVMMK10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AnyanwuCDFFHHHKOPRSSSPT10,
author = {Ejike Anyanwu and
Kaitlyn Cole and
Karlee Driver and
Anthony Falcone and
Elizabeth Farnsworth and
Benjamin Howard and
Brittney Howard and
Courtney Howard and
Rodney A. King and
Jordan Olberding and
Mackenzie Perkins and
Claire Rinehart and
Heidi Sayre and
Tyler Scaff and
Sarah Schrader and
Prasanna Tamarapu Parthasarathy and
Cynthia Tope},
title = {Sequence and annotation of the Wizard007 mycobacterium phage genome},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P15},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P15},
doi = {10.1186/1471-2105-11-S4-P15},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AnyanwuCDFFHHHKOPRSSSPT10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ArnaoudovaJMSY10,
author = {Elissaveta G. Arnaoudova and
Jerzy W. Jaromczyk and
Neil Moore and
Christopher L. Schardl and
Ruriko Yoshida},
title = {\emph{Phylotree} - a toolkit for computing experiments with distance-based
methods for genome coevolution},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P6},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P6},
doi = {10.1186/1471-2105-11-S4-P6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ArnaoudovaJMSY10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Aziz10,
author = {Ramy K. Aziz},
title = {Subsystems-based servers for rapid annotation of genomes and metagenomes},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {O2},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-O2},
doi = {10.1186/1471-2105-11-S4-O2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Aziz10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Aziz10a,
author = {Ramy Karam Aziz},
title = {In silico analysis of a family of extracellular polysaccharide deacetylases
involved in virulence of pathogenic gram-positive cocci},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P8},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P8},
doi = {10.1186/1471-2105-11-S4-P8},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Aziz10a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AzizATRKWK10,
author = {Ramy K. Aziz and
Bruce J. Aronow and
William L. Taylor and
Sarah Rowe and
Rita Kansal and
Mark J. Walker and
Malak Kotb},
title = {Integrating neighbor clustering, coexpression clustering and subsystems
analysis to define dynamic changes in regulatory networks associated
with group {A} streptococcal sociomicrobiology and niche adaptation},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P12},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P12},
doi = {10.1186/1471-2105-11-S4-P12},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AzizATRKWK10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Bader10,
author = {Martin Bader},
title = {Genome rearrangements with duplications},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {27},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S27},
doi = {10.1186/1471-2105-11-S1-S27},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Bader10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BaiDK10,
author = {Shuju Bai and
Tianchuan Du and
Ebrahim Khosravi},
title = {Applying internal coordinate mechanics to model the interactions between
8R-lipoxygenase and its substrate},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S2},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S2},
doi = {10.1186/1471-2105-11-S6-S2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BaiDK10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BansalBE10,
author = {Mukul S. Bansal and
J. Gordon Burleigh and
Oliver Eulenstein},
title = {Efficient genome-scale phylogenetic analysis under the duplication-loss
and deep coalescence cost models},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {42},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S42},
doi = {10.1186/1471-2105-11-S1-S42},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BansalBE10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BantonRP10,
author = {Sophia Banton and
Zvi Roth and
Mirjana Pavlovic},
title = {A bioengineering approach for rational vaccine design towards the
Ebola Virus},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-10}},
pages = {O12},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S10-O12},
doi = {10.1186/1471-2105-11-S10-O12},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BantonRP10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BehrBZSHR10,
author = {Jonas Behr and
Regina Bohnert and
Georg Zeller and
Gabriele Beate Schweikert and
Lisa Hartmann and
Gunnar R{\"{a}}tsch},
title = {Next generation genome annotation with mGene.ngs},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-10}},
pages = {O8},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S10-O8},
doi = {10.1186/1471-2105-11-S10-O8},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BehrBZSHR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BhardwajGL10,
author = {Nitin Bhardwaj and
Mark Gerstein and
Hui Lu},
title = {Genome-wide sequence-based prediction of peripheral proteins using
a novel semi-supervised learning technique},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {6},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S6},
doi = {10.1186/1471-2105-11-S1-S6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BhardwajGL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BhatnagarPLK10,
author = {Shephali Bhatnagar and
Siva K. Panguluri and
Robert F. Lundy and
Ashok Kumar},
title = {Pleiotropy of tumor necrosis factor-alpha in {C2C12} myotubes: \emph{in
vitro} studies on genes, networks and pathways involved in TNF-alpha
induced skeletal muscle atrophy},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P13},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P13},
doi = {10.1186/1471-2105-11-S4-P13},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BhatnagarPLK10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BiGD10,
author = {LiPeng Bi and
Chad Groce and
Cheryl Davis},
title = {Molecular analysis of \emph{Trypanosoma cruzi} isolates obtained from
raccoons in Warren and Barren counties of Kentucky},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P3},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P3},
doi = {10.1186/1471-2105-11-S4-P3},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BiGD10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BlandNM10,
author = {Charles Bland and
Abigail Newsome and
Aleksandra Markovets},
title = {Promoter prediction in E. coli based on {SIDD} profiles and Artificial
Neural Networks},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S17},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S17},
doi = {10.1186/1471-2105-11-S6-S17},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BlandNM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BottomsFM10,
author = {Christopher A. Bottoms and
Sherry Flint{-}Garcia and
Michael D. McMullen},
title = {IView: introgression library visualization and query tool},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S28},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S28},
doi = {10.1186/1471-2105-11-S6-S28},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BottomsFM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BoucherK10,
author = {Christina Boucher and
James King},
title = {Fast motif recognition via application of statistical thresholds},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {11},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S11},
doi = {10.1186/1471-2105-11-S1-S11},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BoucherK10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BronsonHFGW10,
author = {Jonathan E. Bronson and
Jake M. Hofman and
Jingyi Fei and
Ruben L. Gonzalez and
Chris H. Wiggins},
title = {Graphical models for inferring single molecule dynamics},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-8}},
pages = {S2},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S8-S2},
doi = {10.1186/1471-2105-11-S8-S2},
timestamp = {Wed, 17 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/BronsonHFGW10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BrownG10,
author = {Daniel G. Brown and
Daniil Golod},
title = {Decoding HMMs using the \emph{k }best paths: algorithms and applications},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {28},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S28},
doi = {10.1186/1471-2105-11-S1-S28},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BrownG10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BrownT10,
author = {Daniel G. Brown and
Jakub Truszkowski},
title = {New decoding algorithms for Hidden Markov Models using distance measures
on labellings},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {40},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S40},
doi = {10.1186/1471-2105-11-S1-S40},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BrownT10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CarageaCSH10,
author = {Cornelia Caragea and
Doina Caragea and
Adrian Silvescu and
Vasant G. Honavar},
title = {Semi-supervised prediction of protein subcellular localization using
abstraction augmented Markov models},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-8}},
pages = {S6},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S8-S6},
doi = {10.1186/1471-2105-11-S8-S6},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/CarageaCSH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CarmonaSLCA10,
author = {Santiago J. Carmona and
Paula Sartor and
Maria Leguizam{\'{o}}n and
Oscar Campetella and
Fern{\'{a}}n Ag{\"{u}}ero},
title = {A computational pipeline for diagnostic biomarker discovery in the
human pathogen Trypanosoma cruzi},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-10}},
pages = {O11},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S10-O11},
doi = {10.1186/1471-2105-11-S10-O11},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/CarmonaSLCA10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChaitankarGPGZ10,
author = {Vijender Chaitankar and
Preetam Ghosh and
Edward J. Perkins and
Ping Gong and
Chaoyang Zhang},
title = {Time lagged information theoretic approaches to the reverse engineering
of gene regulatory networks},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S19},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S19},
doi = {10.1186/1471-2105-11-S6-S19},
timestamp = {Tue, 24 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ChaitankarGPGZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChanLSYLH10,
author = {Wen{-}Ching Chan and
Po{-}Huang Liang and
Yan{-}Ping Shih and
Ueng{-}Cheng Yang and
Wen{-}Chang Lin and
Chun{-}Nan Hsu},
title = {Learning to predict expression efficacy of vectors in recombinant
protein production},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {21},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S21},
doi = {10.1186/1471-2105-11-S1-S21},
timestamp = {Mon, 23 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ChanLSYLH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChandraGNPP10,
author = {Vinod S. S. Chandra and
Reshmi Girijadevi and
Achuthsankar S. Nair and
Sreenadhan S. Pillai and
Radhakrishna M. Pillai},
title = {MTar: a computational microRNA target prediction architecture for
human transcriptome},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {2},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S2},
doi = {10.1186/1471-2105-11-S1-S2},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChandraGNPP10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChangMAR10,
author = {Hsun{-}Hsien Chang and
Michael J. McGeachie and
Gil Alterovitz and
Marco Ramoni},
title = {Mapping transcription mechanisms from multimodal genomic data},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-9}},
pages = {S2},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S9-S2},
doi = {10.1186/1471-2105-11-S9-S2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChangMAR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChangSL10,
author = {Darby Tien{-}Hao Chang and
Yu{-}Tang Syu and
Po{-}Chang Lin},
title = {Predicting the protein-protein interactions using primary structures
with predicted protein surface},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {3},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S3},
doi = {10.1186/1471-2105-11-S1-S3},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChangSL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChenDB10,
author = {David P. Chen and
Joel Dudley and
Atul J. Butte},
title = {Latent physiological factors of complex human diseases revealed by
independent component analysis of clinarrays},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-9}},
pages = {S4},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S9-S4},
doi = {10.1186/1471-2105-11-S9-S4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChenDB10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChenLL10,
author = {Yixuan Chen and
Xin Li and
Jing Li},
title = {A novel approach for haplotype-based association analysis using family
data},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {45},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S45},
doi = {10.1186/1471-2105-11-S1-S45},
timestamp = {Fri, 19 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ChenLL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChenLM10,
author = {Yifei Chen and
Feng Liu and
Bernard Manderick},
title = {BioLMiner and the BioCreative {II.5} challenge},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-5}},
pages = {P6},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S5-P6},
doi = {10.1186/1471-2105-11-S5-P6},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ChenLM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChenWNL10,
author = {Ting{-}Wen Chen and
Timothy H. Wu and
Wailap V. Ng and
Wen{-}Chang Lin},
title = {{DODO:} an efficient orthologous genes assignment tool based on domain
architectures. Domain based ortholog detection},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-7}},
pages = {S6},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S7-S6},
doi = {10.1186/1471-2105-11-S7-S6},
timestamp = {Mon, 23 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ChenWNL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChenYLL10,
author = {Yun{-}Qin Chen and
Hui Yu and
Yi{-}Xue Li and
Yuan{-}Yuan Li},
title = {Sorting out inherent features of head-to-head gene pairs by evolutionary
conservation},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-11}},
pages = {S16},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S11-S16},
doi = {10.1186/1471-2105-11-S11-S16},
timestamp = {Thu, 27 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ChenYLL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChinCHKL10,
author = {Chia{-}Hao Chin and
Shu{-}Hwa Chen and
Chin{-}Wen Ho and
Ming{-}Tat Ko and
Chung{-}Yen Lin},
title = {A hub-attachment based method to detect functional modules from confidence-scored
protein interactions and expression profiles},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {25},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S25},
doi = {10.1186/1471-2105-11-S1-S25},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChinCHKL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChoZ10,
author = {Young{-}Rae Cho and
Aidong Zhang},
title = {Identification of functional hubs and modules by converting interactome
networks into hierarchical ordering of proteins},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-3}},
pages = {3},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S3-S3},
doi = {10.1186/1471-2105-11-S3-S3},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChoZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChungP10,
author = {Won{-}Hyoung Chung and
Seong{-}Bae Park},
title = {Hit integration for identifying optimal spaced seeds},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {37},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S37},
doi = {10.1186/1471-2105-11-S1-S37},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChungP10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CirielloGG10,
author = {Giovanni Ciriello and
Claudio Gallina and
Concettina Guerra},
title = {Analysis of interactions between ribosomal proteins and {RNA} structural
motifs},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {41},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S41},
doi = {10.1186/1471-2105-11-S1-S41},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/CirielloGG10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Cohen10,
author = {Kevin Bretonnel Cohen},
title = {Integrating text mining into high-throughput assay analysis},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-5}},
pages = {O3},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S5-O3},
doi = {10.1186/1471-2105-11-S5-O3},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Cohen10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ColemanZLM10,
author = {Stephen J. Coleman and
Zheng Zeng and
Jinze Liu and
James N. MacLeod},
title = {Analysis of equine protein-coding gene structure and expression by
RNA-sequencing},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {O8},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-O8},
doi = {10.1186/1471-2105-11-S4-O8},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ColemanZLM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CominV10,
author = {Matteo Comin and
Davide Verzotto},
title = {Classification of protein sequences by means of irredundant patterns},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {16},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S16},
doi = {10.1186/1471-2105-11-S1-S16},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/CominV10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DentMHP10,
author = {Leon Dent and
Dana Marshall and
Robert Hulette and
Siddharth Pratap},
title = {Next-gen sequencing of multi-drug resistant \emph{Acinetobacter baumannii}
to determine antibiotic resistance genotypes},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P16},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P16},
doi = {10.1186/1471-2105-11-S4-P16},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DentMHP10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DiXSY10,
author = {Chao Di and
Wenying Xu and
Zhen Su and
Joshua S. Yuan},
title = {Comparative genome analysis of {PHB} gene family reveals deep evolutionary
origins and diverse gene function},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S22},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S22},
doi = {10.1186/1471-2105-11-S6-S22},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DiXSY10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DingXFHPHBST10,
author = {Don Ding and
Lei Xu and
Hong Fang and
Huixiao Hong and
Roger Perkins and
Steve Harris and
Edward D. Bearden and
Leming Shi and
Weida Tong},
title = {The {EDKB:} an established knowledge base for endocrine disrupting
chemicals},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S5},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S5},
doi = {10.1186/1471-2105-11-S6-S5},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DingXFHPHBST10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DingZG10,
author = {Jiandong Ding and
Shuigeng Zhou and
Jihong Guan},
title = {MiRenSVM: towards better prediction of microRNA precursors using an
ensemble {SVM} classifier with multi-loop features},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-11}},
pages = {S11},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S11-S11},
doi = {10.1186/1471-2105-11-S11-S11},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/DingZG10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DongASL10,
author = {Xianjun Dong and
Altuna Akalin and
Yogita Sharma and
Boris Lenhard},
title = {Translog, a web browser for studying the expression divergence of
homologous genes},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {59},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S59},
doi = {10.1186/1471-2105-11-S1-S59},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DongASL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DuncanPZ10,
author = {Dexter T. Duncan and
Naresh Prodduturi and
Bing Zhang},
title = {WebGestalt2: an updated and expanded version of the Web-based Gene
Set Analysis Toolkit},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P10},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P10},
doi = {10.1186/1471-2105-11-S4-P10},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DuncanPZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/EllingsonHSWV10,
author = {Sally Ellingson and
Joe Hughes and
Dylan Storey and
Rick Weber and
Nathan Verberkmoes},
title = {Development of tools for the automated analysis of spectra generated
by tandem mass spectrometry},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P27},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P27},
doi = {10.1186/1471-2105-11-S4-P27},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/EllingsonHSWV10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/EllingsonPGSHGL10,
author = {Sally R. Ellingson and
Charles A. Phillips and
Randy Glenn and
Douglas Swanson and
Thomas Ha and
Daniel Goldowitz and
Michael A. Langston},
title = {Serendipitous discoveries in microarray analysis},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P24},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P24},
doi = {10.1186/1471-2105-11-S4-P24},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/EllingsonPGSHGL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FangXDJPFZNFCSYTHZCT10,
author = {Hong Fang and
Joshua Xu and
Don Ding and
Scott A. Jackson and
Isha R. Patel and
Jonathan G. Frye and
Wen Zou and
Rajesh Nayak and
Steven L. Foley and
James J. Chen and
Zhenqiang Su and
Yanbin Ye and
Steve Turner and
Steve Harris and
Guangxu Zhou and
Carl Cerniglia and
Weida Tong},
title = {An {FDA} bioinformatics tool for microbial genomics research on molecular
characterization of bacterial foodborne pathogens using microarrays},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S4},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S4},
doi = {10.1186/1471-2105-11-S6-S4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FangXDJPFZNFCSYTHZCT10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GaoX10,
author = {Jianjiong Gao and
Dong Xu},
title = {The Musite open-source framework for phosphorylation-site prediction},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-12}},
pages = {S9},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S12-S9},
doi = {10.1186/1471-2105-11-S12-S9},
timestamp = {Tue, 09 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GaoX10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GargTR10a,
author = {Aarti Garg and
Rupinder Tewari and
Gajendra P. S. Raghava},
title = {Virtual Screening of potential drug-like inhibitors against Lysine/DAP
pathway of \emph{Mycobacterium tuberculosis}},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {53},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S53},
doi = {10.1186/1471-2105-11-S1-S53},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GargTR10a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Gautier10,
author = {Laurent Gautier},
title = {An intuitive Python interface for Bioconductor libraries demonstrates
the utility of language translators},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-12}},
pages = {S11},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S12-S11},
doi = {10.1186/1471-2105-11-S12-S11},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/Gautier10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GearheartRA10,
author = {Christy M. Gearheart and
Eric C. Rouchka and
Benjamin Arazi},
title = {Design of a DNA-based shift register},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P31},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P31},
doi = {10.1186/1471-2105-11-S4-P31},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GearheartRA10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GeorgeT10,
author = {Tina P. George and
Tessamma Thomas},
title = {Discrete wavelet transform de-noising in eukaryotic gene splicing},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {50},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S50},
doi = {10.1186/1471-2105-11-S1-S50},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GeorgeT10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GhoshKDR10,
author = {Preetam Ghosh and
Amit Kumar and
Bhaswati Datta and
Vijayaraghavan Rangachari},
title = {Dynamics of protofibril elongation and association involved in A{\(\beta\)}42
peptide aggregation in Alzheimer's disease},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S24},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S24},
doi = {10.1186/1471-2105-11-S6-S24},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GhoshKDR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GhoshMM10,
author = {Tarini Shankar Ghosh and
Monzoorul Haque Mohammed and
Sharmila S. Mande},
title = {DiScRIBinATE: a rapid method for accurate taxonomic classification
of metagenomic sequences},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-7}},
pages = {S14},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S7-S14},
doi = {10.1186/1471-2105-11-S7-S14},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GhoshMM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GinterBP10,
author = {Filip Ginter and
Jari Bj{\"{o}}rne and
Sampo Pyysalo},
title = {Event extraction on PubMed scale},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-5}},
pages = {O2},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S5-O2},
doi = {10.1186/1471-2105-11-S5-O2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GinterBP10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GongZKFC10,
author = {Haijun Gong and
Paolo Zuliani and
Anvesh Komuravelli and
James R. Faeder and
Edmund M. Clarke},
title = {Analysis and verification of the {HMGB1} signaling pathway},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-7}},
pages = {S10},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S7-S10},
doi = {10.1186/1471-2105-11-S7-S10},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GongZKFC10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GuoTRT10,
author = {Huazhang Guo and
Larry Tague and
Ramesh Ray and
Gabor Tigyi},
title = {A two-step approach to qPCR experimental design and software for data
analysis},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P18},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P18},
doi = {10.1186/1471-2105-11-S4-P18},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GuoTRT10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GuptaWBPPD10,
author = {Ravi Gupta and
Priyankara Wikramasinghe and
Anirban Bhattacharyya and
Francisco A. Perez and
Sharmistha Pal and
Ramana V. Davuluri},
title = {Annotation of gene promoters by integrative data-mining of ChIP-seq
Pol-II enrichment data},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {65},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S65},
doi = {10.1186/1471-2105-11-S1-S65},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/GuptaWBPPD10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GuzzettaJF10,
author = {Giorgio Guzzetta and
Giuseppe Jurman and
Cesare Furlanello},
title = {A machine learning pipeline for quantitative phenotype prediction
from genotype data},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-8}},
pages = {S3},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S8-S3},
doi = {10.1186/1471-2105-11-S8-S3},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GuzzettaJF10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HalicKBR10,
author = {Tansel Halic and
Sinan Kockara and
Coskun Bayrak and
Richard Rowe},
title = {Mixed reality simulation of rasping procedure in artificial cervical
disc replacement {(ACDR)} surgery},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S11},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S11},
doi = {10.1186/1471-2105-11-S6-S11},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HalicKBR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Han10,
author = {Henry Han},
title = {Nonnegative principal component analysis for mass spectral serum profiles
and biomarker discovery},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {1},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S1},
doi = {10.1186/1471-2105-11-S1-S1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Han10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HanPC10,
author = {Bing Han and
Meeyoung Park and
Xue{-}wen Chen},
title = {A Markov blanket-based method for detecting causal SNPs in {GWAS}},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-3}},
pages = {5},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S3-S5},
doi = {10.1186/1471-2105-11-S3-S5},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HanPC10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HarpazCF10,
author = {Rave Harpaz and
Herbert S. Chase and
Carol Friedman},
title = {Mining multi-item drug adverse effect associations in spontaneous
reporting systems},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-9}},
pages = {S7},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S9-S7},
doi = {10.1186/1471-2105-11-S9-S7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HarpazCF10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HarrisJS10,
author = {Daniel R. Harris and
Jerzy W. Jaromczyk and
Christopher L. Schardl},
title = {Experimenting with database segmentation size vs time performance
for mpiBLAST on an {IBM} {HS21} blade cluster},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P9},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P9},
doi = {10.1186/1471-2105-11-S4-P9},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HarrisJS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HeFE10,
author = {Dan He and
Nicholas A. Furlotte and
Eleazar Eskin},
title = {Detection and reconstruction of tandemly organized de novo copy number
variations},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-11}},
pages = {S12},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S11-S12},
doi = {10.1186/1471-2105-11-S11-S12},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HeFE10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HettichRVSFJ10,
author = {Robert L. Hettich and
Alison L. Russell and
Nathan Verberkmoes and
Manesh Shah and
Claire Fraser{-}Liggett and
Janet K. Jansson},
title = {Integrating experimental and computational approaches for the proteogenomic
characterizations of microbial communities},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {O6},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-O6},
doi = {10.1186/1471-2105-11-S4-O6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HettichRVSFJ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HettlingHB10,
author = {Hannes Hettling and
Jaap Heringa and
Johannes H. G. M. van Beek},
title = {Analysis of the functional properties of the creatine kinase system
using a multiscale 'sloppy' modeling approach},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-10}},
pages = {O9},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S10-O9},
doi = {10.1186/1471-2105-11-S10-O9},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HettlingHB10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HowardH10,
author = {Brian E. Howard and
Steffen Heber},
title = {Towards reliable isoform quantification using {RNA-SEQ} data},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-3}},
pages = {6},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S3-S6},
doi = {10.1186/1471-2105-11-S3-S6},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HowardH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HsiehCHWO10,
author = {Chih{-}Hung Hsieh and
Darby Tien{-}Hao Chang and
Cheng{-}Hao Hsueh and
Chi{-}Yeh Wu and
Yen{-}Jen Oyang},
title = {Predicting microRNA precursors with a generalized Gaussian components
based density estimation algorithm},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {52},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S52},
doi = {10.1186/1471-2105-11-S1-S52},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HsiehCHWO10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HuFGR10,
author = {Zhi{-}Liang Hu and
Rex Fernando and
Dorian Garrick and
James M. Reecy},
title = {SNPlotz: a generic genome plot tool to aid the {SNP} association studies},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P4},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P4},
doi = {10.1186/1471-2105-11-S4-P4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HuFGR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HuJE10,
author = {Pingzhao Hu and
Hui Jiang and
Andrew Emili},
title = {Predicting protein functions by relaxation labelling protein interaction
network},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {64},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S64},
doi = {10.1186/1471-2105-11-S1-S64},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HuJE10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HuZ10,
author = {Jianjun Hu and
Fan Zhang},
title = {BayesMotif: de novo protein sorting motif discovery from impure datasets},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {66},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S66},
doi = {10.1186/1471-2105-11-S1-S66},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HuZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HuangL10,
author = {Yezhou Huang and
Shao Li},
title = {Detection of characteristic sub pathway network for angiogenesis based
on the comprehensive pathway network},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {32},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S32},
doi = {10.1186/1471-2105-11-S1-S32},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/HuangL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HuangZZ10,
author = {Hung{-}Chung Huang and
Siyuan Zheng and
Zhongming Zhao},
title = {Application of Pearson correlation coefficient {(PCC)} and Kolmogorov-Smirnov
distance {(KSD)} metrics to identify disease-specific biomarker genes},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P23},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P23},
doi = {10.1186/1471-2105-11-S4-P23},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HuangZZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HuqunFMMTSKKOSH10,
author = {Huqun and
Shun{-}ichiro Fukuyama and
Hiroyuki Morino and
Hiroshi Miyazawa and
Tomoaki Tanaka and
Tomoko Suzuki and
Masakazu Kohda and
Hideshi Kawakami and
Yasushi Okazaki and
Kuniaki Seyama and
Koichi Hagiwara},
title = {A quantitatively-modeled homozygosity mapping algorithm, qHomozygosityMapping,
utilizing whole genome single nucleotide polymorphism genotyping data},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-7}},
pages = {S5},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S7-S5},
doi = {10.1186/1471-2105-11-S7-S5},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/HuqunFMMTSKKOSH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/IjazSL10,
author = {Ali Zeeshan Ijaz and
Min Song and
Doheon Lee},
title = {{MKEM:} a Multi-level Knowledge Emergence Model for mining undiscovered
public knowledge},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-2}},
pages = {3},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S2-S3},
doi = {10.1186/1471-2105-11-S2-S3},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/IjazSL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JeongK10,
author = {Chan{-}seok Jeong and
Dongsup Kim},
title = {Linear predictive coding representation of correlated mutation for
protein sequence alignment},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-2}},
pages = {2},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S2-S2},
doi = {10.1186/1471-2105-11-S2-S2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JeongK10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JiaH10,
author = {Yi Jia and
Jun Huan},
title = {Constructing non-stationary Dynamic Bayesian Networks with a flexible
lag choosing mechanism},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S27},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S27},
doi = {10.1186/1471-2105-11-S6-S27},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JiaH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JiaZ10,
author = {Peilin Jia and
Zhongming Zhao},
title = {Pathway- and network-based analysis of {GWAS} data revealed susceptibility
gene sets to schizophrenia},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {O1},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-O1},
doi = {10.1186/1471-2105-11-S4-O1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JiaZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JingN10,
author = {Liping Jing and
Michael K. Ng},
title = {Prior knowledge based mining functional modules from Yeast {PPI} networks
with gene ontology},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-11}},
pages = {S3},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S11-S3},
doi = {10.1186/1471-2105-11-S11-S3},
timestamp = {Wed, 03 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/JingN10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JonesLLGABBCCCFGYMMMMPSSSTTTTVZZMHBHHM10,
author = {Steven J. M. Jones and
Janessa Laskin and
Yvonne Y. Li and
Obi L. Griffith and
Jianghong An and
Mikhail Bilenky and
Yaron S. N. Butterfield and
Timothee Cezard and
Eric Chuah and
Richard Corbett and
Anthony P. Fejes and
Malachi Griffith and
John Yee and
Montgomery Martin and
Michael Mayo and
Nataliya Melnyk and
Ryan D. Morin and
Trevor J. Pugh and
Tesa Severson and
Sohrab P. Shah and
Margaret Sutcliffe and
Angela Tam and
Jefferson Terry and
Nina Thiessen and
Thomas Thomson and
Richard Varhol and
Thomas Zeng and
Yongjun Zhao and
Richard A. Moore and
David G. Huntsman and
Inan{\c{c}} Birol and
Martin Hirst and
Robert A. Holt and
Marco A. Marra},
title = {Genomic analysis of a rare human tumor},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {O3},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-O3},
doi = {10.1186/1471-2105-11-S4-O3},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JonesLLGABBCCCFGYMMMMPSSSTTTTVZZMHBHHM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JoshiYLJPGSFMMXS10,
author = {Trupti Joshi and
Zhe Yan and
Marc Libault and
Dong{-}Hoon Jeong and
Sunhee Park and
Pamela J. Green and
D. Janine Sherrier and
Andrew Farmer and
Greg May and
Blake C. Meyers and
Dong Xu and
Gary Stacey},
title = {Prediction of novel miRNAs and associated target genes in \emph{Glycine
max}},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {14},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S14},
doi = {10.1186/1471-2105-11-S1-S14},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/JoshiYLJPGSFMMXS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JungMYK10,
author = {Inkyung Jung and
Akihisa Matsuyama and
Minoru Yoshida and
Dongsup Kim},
title = {PostMod: sequence based prediction of kinase-specific phosphorylation
sites with indirect relationship},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {10},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S10},
doi = {10.1186/1471-2105-11-S1-S10},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JungMYK10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JursicMGCL10,
author = {Matjaz Jursic and
Igor Mozetic and
Miha Grcar and
Bojan Cestnik and
Nada Lavrac},
title = {Identification of concepts bridging diverse biomedical domains},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-5}},
pages = {P4},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S5-P4},
doi = {10.1186/1471-2105-11-S5-P4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JursicMGCL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KabirNI10,
author = {Mitra Kabir and
Nasimul Noman and
Hitoshi Iba},
title = {Reverse engineering gene regulatory network from microarray data using
linear time-variant model},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {56},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S56},
doi = {10.1186/1471-2105-11-S1-S56},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KabirNI10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KafkasVRT10,
author = {Senay Kafkas and
Ekrem Varoglu and
Dietrich Rebholz{-}Schuhmann and
Bahar Taneri},
title = {Functional variation of alternative splice forms in their protein
interaction networks: a literature mining approach},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-5}},
pages = {P1},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S5-P1},
doi = {10.1186/1471-2105-11-S5-P1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KafkasVRT10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KandothEF10,
author = {Cyriac Kandoth and
Fikret Er{\c{c}}al and
Ronald L. Frank},
title = {A framework for automated enrichment of functionally significant inverted
repeats in whole genomes},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S20},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S20},
doi = {10.1186/1471-2105-11-S6-S20},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KandothEF10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KelleyGHBWHPPPLMAOHW10,
author = {Rowena Y. Kelley and
Cathy R. Gresham and
Jonathan Harper and
Susan M. Bridges and
Marilyn Warburton and
Leigh K. Hawkins and
Olga Pechanova and
Bela Peethambaran and
Tibor Pechan and
Dawn S. Luthe and
J. E. Mylroie and
Arunkanth Ankala and
Seval Ozkan and
W. B. Henry and
W. Paul Williams},
title = {Integrated database for identifying candidate genes for Aspergillus
flavus resistance in maize},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S25},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S25},
doi = {10.1186/1471-2105-11-S6-S25},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KelleyGHBWHPPPLMAOHW10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KellyVF10,
author = {Ryan J. Kelly and
David E. Vincent and
Iddo Friedberg},
title = {IPRStats: visualization of the functional potential of an InterProScan
run},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-12}},
pages = {S13},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S12-S13},
doi = {10.1186/1471-2105-11-S12-S13},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KellyVF10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KimKJCL10,
author = {Younghoon Kim and
Imhoi Koo and
Byung Hwa Jung and
Bong Chul Chung and
Doheon Lee},
title = {Multivariate classification of urine metabolome profiles for breast
cancer diagnosis},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-2}},
pages = {4},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S2-S4},
doi = {10.1186/1471-2105-11-S2-S4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KimKJCL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KimWYG10,
author = {Dong{-}Chul Kim and
Xiaoyu Wang and
Chin{-}Rang Yang and
Jean Gao},
title = {Learning biological network using mutual information and conditional
independence},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-3}},
pages = {9},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S3-S9},
doi = {10.1186/1471-2105-11-S3-S9},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KimWYG10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KingRP10,
author = {Rodney A. King and
Claire Rinehart and
Prasanna Tamarapu Parthasarathy},
title = {The {HHMI} National Genomics Research Initiative at Western Kentucky
University},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P20},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P20},
doi = {10.1186/1471-2105-11-S4-P20},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KingRP10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KlijnMA10,
author = {Christiaan Klijn and
Magali Michaut and
Thomas Abeel},
title = {Highlights from the 6th International Society for Computational Biology
Student Council Symposium at the 18th Annual International Conference
on Intelligent Systems for Molecular Biology},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-10}},
pages = {I1},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S10-I1},
doi = {10.1186/1471-2105-11-S10-I1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KlijnMA10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KockaraMCA10,
author = {Sinan Kockara and
Mutlu Mete and
Bernard Chen and
Kemal Aydin},
title = {Analysis of density based and fuzzy c-means clustering methods on
lesion border extraction in dermoscopy images},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S26},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S26},
doi = {10.1186/1471-2105-11-S6-S26},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KockaraMCA10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KoesslerKKH10,
author = {Denise R. Koessler and
Debra J. Knisley and
Jeff Knisley and
Teresa W. Haynes},
title = {A predictive model for secondary {RNA} structure using graph theory
and a neural network},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S21},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S21},
doi = {10.1186/1471-2105-11-S6-S21},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KoesslerKKH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KrallingerTLCV10,
author = {Martin Krallinger and
Ashish V. Tendulkar and
Florian Leitner and
Andrew Chatr{-}aryamontri and
Alfonso Valencia},
title = {The {PPI} affix dictionary {(PPIAD)} and BioMethod Lexicon: importance
of affixes and tags for recognition of entity mentions and experimental
protein interactions},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-5}},
pages = {O1},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S5-O1},
doi = {10.1186/1471-2105-11-S5-O1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KrallingerTLCV10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KrishnanLV10,
author = {S. P. T. Krishnan and
Sim Sze Liang and
Bharadwaj Veeravalli},
title = {Towards high performance computing for molecular structure prediction
using {IBM} Cell Broadband Engine - an implementation perspective},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {36},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S36},
doi = {10.1186/1471-2105-11-S1-S36},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KrishnanLV10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KrushkalAQPSLBYUJL10,
author = {Julia Krushkal and
Ronald M. Adkins and
Yanhua Qu and
Jeanette Peeples and
Sreedhar Sontineni and
Ching Leang and
Peter Brown and
Nelson D. Young and
Toshiyuki Ueki and
Katy Juarez and
Derek R. Lovley},
title = {Bioinformatic analysis of gene regulation in the metal-reducing bacterial
family Geobacteraceae},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P11},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P11},
doi = {10.1186/1471-2105-11-S4-P11},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KrushkalAQPSLBYUJL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KuksaP10,
author = {Pavel P. Kuksa and
Vladimir Pavlovic},
title = {Efficient motif finding algorithms for large-alphabet inputs},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-8}},
pages = {S1},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S8-S1},
doi = {10.1186/1471-2105-11-S8-S1},
timestamp = {Tue, 11 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/KuksaP10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KulkarniKMPSV10,
author = {Vishwesh V. Kulkarni and
Venkatesh Kareenhalli and
Pushkar Malakar and
Lucy Y. Pao and
Michael G. Safonov and
Ganesh A. Viswanathan},
title = {Stability analysis of the {GAL} regulatory network in \emph{Saccharomyces
cerevisiae} and \emph{Kluyveromyces lactis}},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {43},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S43},
doi = {10.1186/1471-2105-11-S1-S43},
timestamp = {Wed, 29 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KulkarniKMPSV10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KumarN10,
author = {Ranjit Kumar and
Bindu Nanduri},
title = {{HPIDB} - a unified resource for host-pathogen interactions},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S16},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S16},
doi = {10.1186/1471-2105-11-S6-S16},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KumarN10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KumarR10,
author = {Gaurav Kumar and
Shoba Ranganathan},
title = {Network analysis of human protein location},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-7}},
pages = {S9},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S7-S9},
doi = {10.1186/1471-2105-11-S7-S9},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KumarR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LacsonMYO10,
author = {Ronilda Lacson and
Michael Mbagwu and
Hisham Yousif and
Lucila Ohno{-}Machado},
title = {Assessing the quality of annotations in asthma gene expression experiments},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-9}},
pages = {S8},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S9-S8},
doi = {10.1186/1471-2105-11-S9-S8},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LacsonMYO10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LarsonY10a,
author = {Jessica L. Larson and
Guo{-}Cheng Yuan},
title = {A hidden Markov model for detecting multi-gene chromatin domains},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-10}},
pages = {O5},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S10-O5},
doi = {10.1186/1471-2105-11-S10-O5},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LarsonY10a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LataMR10,
author = {Sneh Lata and
Nitish K. Mishra and
Gajendra P. S. Raghava},
title = {AntiBP2: improved version of antibacterial peptide prediction},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {19},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S19},
doi = {10.1186/1471-2105-11-S1-S19},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LataMR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiCYA10,
author = {Limin Li and
Wai{-}Ki Ching and
Takako Yamaguchi and
Kiyoko F. Aoki{-}Kinoshita},
title = {A weighted \emph{q}-gram method for glycan structure classification},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {33},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S33},
doi = {10.1186/1471-2105-11-S1-S33},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiCYA10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiHLY10,
author = {Yanpeng Li and
Xiaohua Hu and
Hongfei Lin and
Zhihao Yang},
title = {Learning an enriched representation from unlabeled data for protein-protein
interaction extraction},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-2}},
pages = {7},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S2-S7},
doi = {10.1186/1471-2105-11-S2-S7},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/LiHLY10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiMB10,
author = {Xiaofan F. Li and
Iain H. Moal and
Paul A. Bates},
title = {Bridging the gaps: atomic simulation of macromolecular environment
brings together protein docking, interaction kinetics and the crowding
effects},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-10}},
pages = {O2},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S10-O2},
doi = {10.1186/1471-2105-11-S10-O2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiMB10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiMSTLZ10,
author = {Jing Li and
Zeqiang Ma and
Robbert J. C. Slebos and
David L. Tabb and
Daniel C. Liebler and
Bing Zhang},
title = {Enabling proteomics-based identification of human cancer variations},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P29},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P29},
doi = {10.1186/1471-2105-11-S4-P29},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiMSTLZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiP10,
author = {Yongjin Li and
Jagdish Chandra Patra},
title = {Integration of multiple data sources to prioritize candidate genes
using discounted rating system},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {20},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S20},
doi = {10.1186/1471-2105-11-S1-S20},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiP10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiZJWZ10,
author = {Shao Li and
Bo Zhang and
Duo Jiang and
Yingying Wei and
Ningbo Zhang},
title = {Herb network construction and co-module analysis for uncovering the
combination rule of traditional Chinese herbal formulae},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-11}},
pages = {S6},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S11-S6},
doi = {10.1186/1471-2105-11-S11-S6},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/LiZJWZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LichtenbergKLANNWJBEEDLW10,
author = {Jens Lichtenberg and
Kyle Kurz and
Xiaoyu Liang and
Rami Al{-}ouran and
Lev Neiman and
Lee J. Nau and
Joshua D. Welch and
Edwin Jacox and
Thomas Bitterman and
Klaus Ecker and
Laura Elnitski and
Frank Drews and
Stephen Lee and
Lonnie R. Welch},
title = {WordSeeker: concurrent bioinformatics software for discovering genome-wide
patterns and word-based genomic signatures},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-12}},
pages = {S6},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S12-S6},
doi = {10.1186/1471-2105-11-S12-S6},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LichtenbergKLANNWJBEEDLW10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LinRSM10,
author = {Yu Lin and
Vaibhav Rajan and
Krister M. Swenson and
Bernard M. E. Moret},
title = {Estimating true evolutionary distances under rearrangements, duplications,
and losses},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {54},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S54},
doi = {10.1186/1471-2105-11-S1-S54},
timestamp = {Tue, 31 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/LinRSM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LinWXC10,
author = {Guan Ning Lin and
Zheng Wang and
Dong Xu and
Jianlin Cheng},
title = {SeqRate: sequence-based protein folding type classification and rates
prediction},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-3}},
pages = {1},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S3-S1},
doi = {10.1186/1471-2105-11-S3-S1},
timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/LinWXC10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiuDMCHX10,
author = {Mei Liu and
Joshua C. Denny and
Subramani Mani and
Yukun Chen and
Yong Hu and
Hua Xu},
title = {Identifying potential drugs that induce {QT} prolongation using electronic
medical records},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P2},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P2},
doi = {10.1186/1471-2105-11-S4-P2},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiuDMCHX10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiuLLZH10,
author = {Wanlin Liu and
Dong Li and
Qijun Liu and
Yunping Zhu and
Fuchu He},
title = {A novel parametric approach to mine gene regulatory relationship from
microarray datasets},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-11}},
pages = {S15},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S11-S15},
doi = {10.1186/1471-2105-11-S11-S15},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiuLLZH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiuSXM10,
author = {Xiaowen Liu and
Baozhen Shan and
Lei Xin and
Bin Ma},
title = {Better score function for peptide identification with {ETD} {MS/MS}
spectra},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {4},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S4},
doi = {10.1186/1471-2105-11-S1-S4},
timestamp = {Wed, 15 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiuSXM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiuTHDTLLDX10,
author = {Qi Liu and
Yejun Tan and
Tao Huang and
Guohui Ding and
Zhidong Tu and
Lei Liu and
Yixue Li and
Hongyue Dai and
Lu Xie},
title = {TF-centered downstream gene set enrichment analysis: Inference of
causal regulators by integrating {TF-DNA} interactions and protein
post-translational modifications information},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-11}},
pages = {S5},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S11-S5},
doi = {10.1186/1471-2105-11-S11-S5},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiuTHDTLLDX10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LuZF10,
author = {Zaixin Lu and
Zhiyu Zhao and
Bin Fu},
title = {Efficient protein alignment algorithm for protein search},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {34},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S34},
doi = {10.1186/1471-2105-11-S1-S34},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LuZF10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MaCK10,
author = {Eddie Y. T. Ma and
Christopher J. F. Cameron and
Stefan C. Kremer},
title = {Classifying and scoring of molecules with the {NGN:} new datasets,
significance tests, and generalization},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-8}},
pages = {S4},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S8-S4},
doi = {10.1186/1471-2105-11-S8-S4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MaCK10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MacIntyreBHK10,
author = {Geoff MacIntyre and
James Bailey and
Izhak Haviv and
Adam Kowalczyk},
title = {is-rSNP: a novel technique for in silico regulatory {SNP} detection},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-10}},
pages = {O7},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S10-O7},
doi = {10.1186/1471-2105-11-S10-O7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MacIntyreBHK10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MagarinosOCSDRCHNBRVA10,
author = {Mar{\'{\i}}a P. Magari{\~{n}}os and
John P. Overington and
Santiago J. Carmona and
Dhanasekaran Shanmugam and
Maria A. Doyle and
Stuart A. Ralph and
Gregory J. Crowther and
Christiane Hertz{-}Fowler and
Solomon Nwaka and
Matthew Berriman and
David S. Roos and
Wesley C. Van Voorhis and
Fern{\'{a}}n Ag{\"{u}}ero},
title = {Designing and implementing chemoinformatic approaches in {TDR} Targets
Database: linking genes to chemical compounds in tropical disease
causing pathogens},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-10}},
pages = {O10},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S10-O10},
doi = {10.1186/1471-2105-11-S10-O10},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MagarinosOCSDRCHNBRVA10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MahmoudA10,
author = {Ahmed Abo{-}Bakr Mahmoud and
Ramy K. Aziz},
title = {Do pathogenic bacteria encode more secreted proteins than their non-pathogenic
relatives?},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P28},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P28},
doi = {10.1186/1471-2105-11-S4-P28},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MahmoudA10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MajumdarR10,
author = {Gipsy Majumdar and
Rajendra Raghow},
title = {Epigenetic control of signaling networks involved in interleukin-18-induced
cardiac hypertrophy and its attenuation by pan-histone deacetylase
inhibitors},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P1},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P1},
doi = {10.1186/1471-2105-11-S4-P1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MajumdarR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MandaFBJNMB10,
author = {Prashanti Manda and
McKinley G. Freeman and
Susan M. Bridges and
T. J. Jankun{-}Kelly and
Bindu Nanduri and
Fiona M. McCarthy and
Shane C. Burgess},
title = {GOModeler- {A} tool for hypothesis-testing of functional genomics
datasets},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S29},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S29},
doi = {10.1186/1471-2105-11-S6-S29},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MandaFBJNMB10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ManoTBP10,
author = {Adi Mano and
Tamir Tuller and
Oded B{\'{e}}j{\`{a}} and
Ron Y. Pinter},
title = {Comparative classification of species and the study of pathway evolution
based on the alignment of metabolic pathways},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {38},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S38},
doi = {10.1186/1471-2105-11-S1-S38},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ManoTBP10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MartinZPBB10,
author = {Jeffrey Martin and
Wenhan Zhu and
Karla D. Passalacqua and
Nicholas H. Bergman and
Mark Borodovsky},
title = {\emph{Bacillus anthracis }genome organization in light of whole transcriptome
sequencing},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-3}},
pages = {10},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S3-S10},
doi = {10.1186/1471-2105-11-S3-S10},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MartinZPBB10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MatthewsW10,
author = {Suzanne J. Matthews and
Tiffani L. Williams},
title = {MrsRF: an efficient MapReduce algorithm for analyzing large collections
of evolutionary trees},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {15},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S15},
doi = {10.1186/1471-2105-11-S1-S15},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MatthewsW10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/McDowallSB10,
author = {Mark D. McDowall and
Michelle S. Scott and
Geoffrey J. Barton},
title = {Human protein-protein interaction prediction},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-10}},
pages = {P1},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S10-P1},
doi = {10.1186/1471-2105-11-S10-P1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/McDowallSB10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MehanNDWZ10,
author = {Michael R. Mehan and
Juan Nunez{-}Iglesias and
Chao Dai and
Michael S. Waterman and
Xianghong Jasmine Zhou},
title = {An integrative modular approach to systematically predict gene-phenotype
associations},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {62},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S62},
doi = {10.1186/1471-2105-11-S1-S62},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MehanNDWZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MeiF10,
author = {Suyu Mei and
Wang Fei},
title = {Amino acid classification based spectrum kernel fusion for protein
subnuclear localization},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {17},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S17},
doi = {10.1186/1471-2105-11-S1-S17},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MeiF10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Melcher10,
author = {Ulrich Melcher},
title = {Assessing constancy of substitution rates in viruses over evolutionary
time},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S3},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S3},
doi = {10.1186/1471-2105-11-S6-S3},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Melcher10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MendoncaT10,
author = {Eneida A. Mendon{\c{c}}a and
Peter Tarczy{-}Hornoch},
title = {Selected proceedings of the 2010 Summit on Translational Bioinformatics},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-9}},
pages = {S1},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S9-S1},
doi = {10.1186/1471-2105-11-S9-S1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MendoncaT10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MerkleMW10,
author = {Daniel Merkle and
Martin Middendorf and
Nicolas Wieseke},
title = {A parameter-adaptive dynamic programming approach for inferring cophylogenies},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {60},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S60},
doi = {10.1186/1471-2105-11-S1-S60},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MerkleMW10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MeteS10,
author = {Mutlu Mete and
Nikolay Metodiev Sirakov},
title = {Lesion detection in demoscopy images with novel density-based and
active contour approaches},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S23},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S23},
doi = {10.1186/1471-2105-11-S6-S23},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MeteS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MishraR10,
author = {Nitish K. Mishra and
Gajendra P. S. Raghava},
title = {Prediction of {FAD} interacting residues in a protein from its primary
sequence using evolutionary information},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {48},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S48},
doi = {10.1186/1471-2105-11-S1-S48},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MishraR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MitraBMZ10,
author = {Ramkrishna Mitra and
Sanghamitra Bandyopadhyay and
Ujjwal Maulik and
Michael Q. Zhang},
title = {SFSSClass: an integrated approach for miRNA based tumor classification},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {22},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S22},
doi = {10.1186/1471-2105-11-S1-S22},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MitraBMZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MitraC10,
author = {Indranil Mitra and
Yan Cui},
title = {Understanding molecular recognition and epitope prediction from Information
Theoretic approach},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P22},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P22},
doi = {10.1186/1471-2105-11-S4-P22},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MitraC10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MitraSH10,
author = {Suparna Mitra and
Max Schubach and
Daniel H. Huson},
title = {Short clones or long clones? {A} simulation study on the use of paired
reads in metagenomics},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {12},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S12},
doi = {10.1186/1471-2105-11-S1-S12},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/MitraSH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MohamedCG10,
author = {Thahir P. Mohamed and
Jaime G. Carbonell and
Madhavi Ganapathiraju},
title = {Active learning for human protein-protein interaction prediction},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {57},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S57},
doi = {10.1186/1471-2105-11-S1-S57},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MohamedCG10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MollerKTPWWGHBP10,
author = {Steffen M{\"{o}}ller and
Hajo N. Krabbenh{\"{o}}ft and
Andreas Tille and
David Paleino and
Alan R. Williams and
Katy Wolstencroft and
Carole A. Goble and
Richard C. G. Holland and
Dominique Belhachemi and
Charles Plessy},
title = {Community-driven computational biology with Debian Linux},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-12}},
pages = {S5},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S12-S5},
doi = {10.1186/1471-2105-11-S12-S5},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/MollerKTPWWGHBP10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MorganKJSB10,
author = {Alexander A. Morgan and
Purvesh Khatri and
Richard Hayden Jones and
Minnie M. Sarwal and
Atul J. Butte},
title = {Comparison of multiplex meta analysis techniques for understanding
the acute rejection of solid organ transplants},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-9}},
pages = {S6},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S9-S6},
doi = {10.1186/1471-2105-11-S9-S6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MorganKJSB10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/NagarajanCCSOLP10,
author = {Shanthi Nagarajan and
Hyunah Choo and
Yong Seo Cho and
Kye Jung Shin and
Kwang{-}Seok Oh and
Byung Lee and
Ae Nim Pae},
title = {IKK{\(\beta\)} inhibitor identification: a multi-filter driven novel
scaffold},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-7}},
pages = {S15},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S7-S15},
doi = {10.1186/1471-2105-11-S7-S15},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/NagarajanCCSOLP10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/NaswaRLKDCSVL10,
author = {Sudhir Naswa and
Gary L. Rogers Jr. and
Rachel M. Lynch and
Stephen A. Kania and
Suchita Das and
Elissa J. Chesler and
Arnold M. Saxton and
Brynn H. Voy and
Michael A. Langston},
title = {Inferring gene coexpression networks for low dose ionizing radiation
using graph theoretical algorithms and systems genetics},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {O5},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-O5},
doi = {10.1186/1471-2105-11-S4-O5},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/NaswaRLKDCSVL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Neefs10,
author = {Jean{-}Marc Neefs},
title = {Pitfalls in applying text mining to scientific literature},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-5}},
pages = {O4},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S5-O4},
doi = {10.1186/1471-2105-11-S5-O4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Neefs10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/NingN10,
author = {Kang Ning and
Alexey I. Nesvizhskii},
title = {The utility of mass spectrometry-based proteomic data for validation
of novel alternative splice forms reconstructed from RNA-Seq data:
a preliminary assessment},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-11}},
pages = {S14},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S11-S14},
doi = {10.1186/1471-2105-11-S11-S14},
timestamp = {Fri, 03 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/NingN10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/OConnorMN10,
author = {Brian D. O'Connor and
Barry Merriman and
Stanley F. Nelson},
title = {SeqWare Query Engine: storing and searching sequence data in the cloud},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-12}},
pages = {S2},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S12-S2},
doi = {10.1186/1471-2105-11-S12-S2},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/OConnorMN10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/OhtaMOMSPT10,
author = {Tomoko Ohta and
Takuya Matsuzaki and
Naoaki Okazaki and
Makoto Miwa and
Rune S{\ae}tre and
Sampo Pyysalo and
Jun'ichi Tsujii},
title = {Medie and Info-pubmed: 2010 update},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-5}},
pages = {P7},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S5-P7},
doi = {10.1186/1471-2105-11-S5-P7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/OhtaMOMSPT10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/OkamuraMN10,
author = {Kohji Okamura and
Kazuaki A. Matsumoto and
Kenta Nakai},
title = {Gradual transition from mosaic to global {DNA} methylation patterns
during deuterostome evolution},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-7}},
pages = {S2},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S7-S2},
doi = {10.1186/1471-2105-11-S7-S2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/OkamuraMN10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/OngenaertD10,
author = {Mat{\'{e}} Ongenaert and
Luc Dehaspe},
title = {Integrating automated literature searches and text mining in biomarker
discovery},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-5}},
pages = {O5},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S5-O5},
doi = {10.1186/1471-2105-11-S5-O5},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/OngenaertD10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/OsmanbeyogluWCG10,
author = {Hatice U. Osmanbeyoglu and
Jessica A. Wehner and
Jaime G. Carbonell and
Madhavi Ganapathiraju},
title = {Active machine learning for transmembrane helix prediction},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {58},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S58},
doi = {10.1186/1471-2105-11-S1-S58},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/OsmanbeyogluWCG10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/OverbyTHKV10,
author = {Casey Lynnette Overby and
Peter Tarczy{-}Hornoch and
Jim Hoath and
Ira J. Kalet and
David L. Veenstra},
title = {Feasibility of incorporating genomic knowledge into electronic medical
records for pharmacogenomic clinical decision support},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-9}},
pages = {S10},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S9-S10},
doi = {10.1186/1471-2105-11-S9-S10},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/OverbyTHKV10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PandeyKG10,
author = {Jayesh Pandey and
Mehmet Koyut{\"{u}}rk and
Ananth Grama},
title = {Functional characterization and topological modularity of molecular
interaction networks},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {35},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S35},
doi = {10.1186/1471-2105-11-S1-S35},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PandeyKG10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PanditS10,
author = {Aridaman Pandit and
Somdatta Sinha},
title = {Using genomic signatures for {HIV-1} sub-typing},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {26},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S26},
doi = {10.1186/1471-2105-11-S1-S26},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PanditS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Paragi-VedanthiD10,
author = {Padmapriya Paragi{-}Vedanthi and
Mukesh Doble},
title = {Comparison of PGH\({}_{\mbox{2 }}\)binding site in prostaglandin synthases},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {51},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S51},
doi = {10.1186/1471-2105-11-S1-S51},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Paragi-VedanthiD10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ParidaM10,
author = {Laxmi Parida and
Gene Myers},
title = {{APBC} 2010. The Eighth Asia Pacific Bioinformatics Conference Bangalore,
India, 18-21 January 2010},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {0},
year = {2010},
url = {http://www.biomedcentral.com/1471-2105/11/S1/I1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ParidaM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ParkH10,
author = {Byungkyu Park and
Kyungsook Han},
title = {An ontology-based search engine for protein-protein interactions},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {23},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S23},
doi = {10.1186/1471-2105-11-S1-S23},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ParkH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PayneHKKZB10,
author = {Philip R. O. Payne and
Kun Huang and
Kristin Keen{-}Circle and
Abhisek Kundu and
Jie Zhang and
Tara Borlawsky},
title = {Multi-dimensional discovery of biomarker and phenotype complexes},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-9}},
pages = {S3},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S9-S3},
doi = {10.1186/1471-2105-11-S9-S3},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/PayneHKKZB10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PennisiPPNNLM10,
author = {Marzio Pennisi and
Francesco Pappalardo and
Arianna Palladini and
Giordano Nicoletti and
Patrizia Nanni and
Pierluigi Lollini and
Santo Motta},
title = {Modeling the competition between lung metastases and the immune system
using agents},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-7}},
pages = {S13},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S7-S13},
doi = {10.1186/1471-2105-11-S7-S13},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/PennisiPPNNLM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Pyysalo10,
author = {Sampo Pyysalo},
title = {Entities, relations, events: representing biomolecular semantics},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-5}},
pages = {O6},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S5-O6},
doi = {10.1186/1471-2105-11-S5-O6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Pyysalo10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/QiuEGCBLZWREHF10,
author = {Judy Qiu and
Jaliya Ekanayake and
Thilina Gunarathne and
Jong Youl Choi and
Seung{-}Hee Bae and
Hui Li and
Bingjing Zhang and
Tak{-}Lon Wu and
Yang Ruan and
Saliya Ekanayake and
Adam Hughes and
Geoffrey C. Fox},
title = {Hybrid cloud and cluster computing paradigms for life science applications},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-12}},
pages = {S3},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S12-S3},
doi = {10.1186/1471-2105-11-S12-S3},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/QiuEGCBLZWREHF10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/QuestLBC10,
author = {Daniel Quest and
Miriam L. Land and
Thomas S. Brettin and
Robert W. Cottingham},
title = {Next generation models for storage and representation of microbial
biological annotation},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S15},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S15},
doi = {10.1186/1471-2105-11-S6-S15},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/QuestLBC10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RajanXLSM10,
author = {Vaibhav Rajan and
Andrew Wei Xu and
Yu Lin and
Krister M. Swenson and
Bernard M. E. Moret},
title = {Heuristics for the inversion median problem},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {30},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S30},
doi = {10.1186/1471-2105-11-S1-S30},
timestamp = {Tue, 31 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/RajanXLSM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RamanFWDBR10,
author = {Sudhir Raman and
Thomas J. Fuchs and
Peter J. Wild and
Edgar Dahl and
Joachim M. Buhmann and
Volker Roth},
title = {Infinite mixture-of-experts model for sparse survival regression with
application to breast cancer},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-8}},
pages = {S8},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S8-S8},
doi = {10.1186/1471-2105-11-S8-S8},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/RamanFWDBR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RawatGEP10,
author = {Arun Rawat and
Kurt A. Gust and
Mohamed O. Elasri and
Edward J. Perkins},
title = {Quail Genomics: a knowledgebase for Northern bobwhite},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S13},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S13},
doi = {10.1186/1471-2105-11-S6-S13},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RawatGEP10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RiveraVB10,
author = {Corban G. Rivera and
Rachit Vakil and
Joel S. Bader},
title = {NeMo: Network Module identification in Cytoscape},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {61},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S61},
doi = {10.1186/1471-2105-11-S1-S61},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RiveraVB10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RogersML10,
author = {Gary L. Rogers and
Pablo Moscato and
Michael A. Langston},
title = {Graph algorithms for machine learning: a case-control study based
on prostate cancer populations and high throughput transcriptomic
data},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P21},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P21},
doi = {10.1186/1471-2105-11-S4-P21},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/RogersML10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RouchkaFR10,
author = {Eric C. Rouchka and
Robert M. Flight and
Claire Rinehart},
title = {Proceedings of the ninth annual {UT-ORNL-KBRIN} Bioinformatics Summit
2010},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {I1},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-I1},
doi = {10.1186/1471-2105-11-S4-I1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RouchkaFR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RouchkaMSRK10,
author = {Eric C. Rouchka and
Diego E. Montoya{-}Durango and
Vilius Stribinskis and
Kenneth S. Ramos and
Ted Kalbfleisch},
title = {Assessment of genetic variation for the {LINE-1} retrotransposon from
next generation sequence data},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-9}},
pages = {S12},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S9-S12},
doi = {10.1186/1471-2105-11-S9-S12},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RouchkaMSRK10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SaelK10,
author = {Lee Sael and
Daisuke Kihara},
title = {Improved protein surface comparison and application to low-resolution
protein structure data},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-11}},
pages = {S2},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S11-S2},
doi = {10.1186/1471-2105-11-S11-S2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SaelK10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SaigoHKT10,
author = {Hiroto Saigo and
Masahiro Hattori and
Hisashi Kashima and
Koji Tsuda},
title = {Reaction graph kernels predict {EC} numbers of unknown enzymatic reactions
in plant secondary metabolism},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {31},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S31},
doi = {10.1186/1471-2105-11-S1-S31},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SaigoHKT10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SaitoSS10,
author = {Yutaka Saito and
Kengo Sato and
Yasubumi Sakakibara},
title = {Robust and accurate prediction of noncoding RNAs from aligned sequences},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-7}},
pages = {S3},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S7-S3},
doi = {10.1186/1471-2105-11-S7-S3},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SaitoSS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SchonbachNTR10,
author = {Christian Sch{\"{o}}nbach and
Kenta Nakai and
Tin Wee Tan and
Shoba Ranganathan},
title = {InCoB2010 - 9\({}^{\mbox{th }}\)International Conference on Bioinformatics
at Tokyo, Japan, September 26-28, 2010},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-7}},
pages = {S1},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S7-S1},
doi = {10.1186/1471-2105-11-S7-S1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SchonbachNTR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Segura-BedmarCPM10,
author = {Isabel Segura{-}Bedmar and
Mario Crespo and
C{\'{e}}sar de Pablo{-}S{\'{a}}nchez and
Paloma Mart{\'{\i}}nez},
title = {Resolving anaphoras for the extraction of drug-drug interactions in
pharmacological documents},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-2}},
pages = {1},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S2-S1},
doi = {10.1186/1471-2105-11-S2-S1},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Segura-BedmarCPM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Segura-BedmarMP10,
author = {Isabel Segura{-}Bedmar and
Paloma Mart{\'{\i}}nez and
C{\'{e}}sar de Pablo{-}S{\'{a}}nchez},
title = {Extracting drug-drug interactions from biomedical texts},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-5}},
pages = {P9},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S5-P9},
doi = {10.1186/1471-2105-11-S5-P9},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Segura-BedmarMP10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SeokKDX10,
author = {Junhee Seok and
Amit Kaushal and
Ronald W. Davis and
Wenzhong Xiao},
title = {Knowledge-based analysis of microarrays for the discovery of transcriptional
regulation relationships},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {8},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S8},
doi = {10.1186/1471-2105-11-S1-S8},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/SeokKDX10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ShahS10,
author = {Shweta Shah and
Nick Sahinidis},
title = {Exploiting physical properties in protein structure alignment},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-10}},
pages = {O3},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S10-O3},
doi = {10.1186/1471-2105-11-S10-O3},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ShahS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ShiLL10,
author = {Yixiang Shi and
Yi{-}Xue Li and
Yuan{-}Yuan Li},
title = {Large number of phosphotransferase genes in the Clostridium beijerinckii
{NCIMB} 8052 genome and the study on their evolution},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-11}},
pages = {S9},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S11-S9},
doi = {10.1186/1471-2105-11-S11-S9},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ShiLL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SlubanL10,
author = {Borut Sluban and
Nada Lavrac},
title = {Supporting the search for cross-context links by outlier detection
methods},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-5}},
pages = {P2},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S5-P2},
doi = {10.1186/1471-2105-11-S5-P2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SlubanL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SmithSSM10,
author = {Michael E. Smith and
Huifang Sun and
Julie B. Schuck and
Shunsuke Moriyama},
title = {Growth hormone induces proliferation in the zebrafish inner ear},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P26},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P26},
doi = {10.1186/1471-2105-11-S4-P26},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SmithSSM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SmitsO10,
author = {Samuel A. Smits and
Cleber C. Ouverney},
title = {Phylometrics: a pipeline for inferring phylogenetic trees from a sequence
relationship network perspective},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S18},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S18},
doi = {10.1186/1471-2105-11-S6-S18},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SmitsO10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SoltTL10,
author = {Ill{\'{e}}s Solt and
Domonkos Tikk and
Ulf Leser},
title = {Species identification for gene name normalization},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-5}},
pages = {P5},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S5-P5},
doi = {10.1186/1471-2105-11-S5-P5},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SoltTL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SomanSS10,
author = {Soja Saghar Soman and
Krishnankutty Chandrika Sivakumar and
Easwaran Sreekumar},
title = {Molecular dynamics simulation studies and \emph{in vitro }site directed
mutagenesis of avian beta-defensin Apl{\_}AvBD2},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {7},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S7},
doi = {10.1186/1471-2105-11-S1-S7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SomanSS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SorathiyaBL10,
author = {Anil Sorathiya and
Andrea Bracciali and
Pietro Li{\`{o}}},
title = {Formal reasoning on qualitative models of coinfection of {HIV} and
Tuberculosis and {HAART} therapy},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {67},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S67},
doi = {10.1186/1471-2105-11-S1-S67},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SorathiyaBL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SuYD10,
author = {Junjie Su and
Byung{-}Jun Yoon and
Edward R. Dougherty},
title = {Identification of diagnostic subnetwork markers for cancer in human
protein-protein interaction network},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S8},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S8},
doi = {10.1186/1471-2105-11-S6-S8},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SuYD10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SunLHR10,
author = {He Quan Sun and
Malcolm Yoke Hean Low and
Wen{-}Jing Hsu and
Jagath C. Rajapakse},
title = {RecMotif: a novel fast algorithm for weak motif discovery},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-11}},
pages = {S8},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S11-S8},
doi = {10.1186/1471-2105-11-S11-S8},
timestamp = {Thu, 10 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/SunLHR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SundaramurthySSGS10,
author = {Pandurangan Sundaramurthy and
Khader Shameer and
Raashi Sreenivasan and
Sunita Gakkhar and
Ramanathan Sowdhamini},
title = {{HORI:} a web server to compute Higher Order Residue Interactions
in protein structures},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {24},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S24},
doi = {10.1186/1471-2105-11-S1-S24},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SundaramurthySSGS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SurendranSS10,
author = {Praveen Surendran and
Alice V. Stanton and
Denis C. Shields},
title = {Genome wide association study of nonsynonymous Single Nucleotide Polymorphisms
for seven common diseases},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-10}},
pages = {O6},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S10-O6},
doi = {10.1186/1471-2105-11-S10-O6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SurendranSS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SwertzDAVKRLTABMBBJP10,
author = {Morris A. Swertz and
Martijn Dijkstra and
Tomasz Adamusiak and
K. Joeri van der Velde and
Alexandros Kanterakis and
Erik T. Roos and
Joris Lops and
Gudmundur A. Thorisson and
Danny Arends and
George Byelas and
Juha Muilu and
Anthony J. Brookes and
Engbert O. de Brock and
Ritsert C. Jansen and
Helen E. Parkinson},
title = {The {MOLGENIS} toolkit: rapid prototyping of biosoftware at the push
of a button},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-12}},
pages = {S12},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S12-S12},
doi = {10.1186/1471-2105-11-S12-S12},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SwertzDAVKRLTABMBBJP10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TambunanW10,
author = {Usman Sumo Friend Tambunan and
Evi Wulandari},
title = {Identification of a better Homo sapiens Class {II} {HDAC} inhibitor
through binding energy calculations and descriptor analysis},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-7}},
pages = {S16},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S7-S16},
doi = {10.1186/1471-2105-11-S7-S16},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TambunanW10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TatonettiDSBA10,
author = {Nicholas P. Tatonetti and
Joel Dudley and
Hersh Sagreiya and
Atul J. Butte and
Russ B. Altman},
title = {An integrative method for scoring candidate genes from association
studies: application to warfarin dosing},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-9}},
pages = {S9},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S9-S9},
doi = {10.1186/1471-2105-11-S9-S9},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TatonettiDSBA10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TayGKOSSTZT10,
author = {Daniel Tay and
Kunde Ramamoorthy Govindarajan and
Asif M. Khan and
Terenze Ong and
Hanif M. Samad and
Wei Soh and
Minyan Tong and
Fan Zhang and
Tin Wee Tan},
title = {T3SEdb: data warehousing of virulence effectors secreted by the bacterial
Type {III} Secretion System},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-7}},
pages = {S4},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S7-S4},
doi = {10.1186/1471-2105-11-S7-S4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TayGKOSSTZT10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Taylor10,
author = {Ronald C. Taylor},
title = {An overview of the Hadoop/MapReduce/HBase framework and its current
applications in bioinformatics},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-12}},
pages = {S1},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S12-S1},
doi = {10.1186/1471-2105-11-S12-S1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Taylor10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TeraguchiPS10,
author = {Shunsuke Teraguchi and
Ashwini Patil and
Daron M. Standley},
title = {Intrinsically disordered domains deviate significantly from random
sequences in mammalian proteins},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-7}},
pages = {S7},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S7-S7},
doi = {10.1186/1471-2105-11-S7-S7},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/TeraguchiPS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ThomasP10,
author = {Fridtjof Thomas and
Stanley Pounds},
title = {A Bayesian change-point algorithm for detecting copy number alteration},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P17},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P17},
doi = {10.1186/1471-2105-11-S4-P17},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ThomasP10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TikkPL10,
author = {Domonkos Tikk and
Peter Palaga and
Ulf Leser},
title = {A fast and effective dependency graph kernel for {PPI} relation extraction},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-5}},
pages = {P8},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S5-P8},
doi = {10.1186/1471-2105-11-S5-P8},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TikkPL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TjioeBH10,
author = {Elina Tjioe and
Michael W. Berry and
Ramin Homayouni},
title = {Discovering gene functional relationships using {FAUN} (Feature Annotation
Using Nonnegative matrix factorization)},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S14},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S14},
doi = {10.1186/1471-2105-11-S6-S14},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TjioeBH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ToussaintWKR10,
author = {Nora C. Toussaint and
Christian Widmer and
Oliver Kohlbacher and
Gunnar R{\"{a}}tsch},
title = {Exploiting physico-chemical properties in string kernels},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-8}},
pages = {S7},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S8-S7},
doi = {10.1186/1471-2105-11-S8-S7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ToussaintWKR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TowficVOCTGH10,
author = {Fadi Towfic and
Susan VanderPlas and
Casey A. Oliver and
Oliver Couture and
Christopher K. Tuggle and
M. Heather West Greenlee and
Vasant G. Honavar},
title = {Detection of gene orthology from gene co-expression and protein interaction
networks},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-3}},
pages = {7},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S3-S7},
doi = {10.1186/1471-2105-11-S3-S7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TowficVOCTGH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/UllahS10,
author = {Abu Zafer M. Dayem Ullah and
Kathleen Steinh{\"{o}}fel},
title = {A hybrid approach to protein folding problem integrating constraint
programming with local search},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {39},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S39},
doi = {10.1186/1471-2105-11-S1-S39},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/UllahS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/UzunerSLLDY10,
author = {Ugur Uzuner and
Weibing Shi and
Lantao Liu and
Sanmin Liu and
Susie Y. Dai and
Joshua S. Yuan},
title = {Enzyme structure dynamics of xylanase {I} from Trichoderma longibrachiatum},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S12},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S12},
doi = {10.1186/1471-2105-11-S6-S12},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/UzunerSLLDY10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/VanheeSBVSRS10,
author = {Peter Vanhee and
Francois Stricher and
Lies Baeten and
Erik Verschueren and
Luis Serrano and
Frederic Rousseau and
Joost Schymkowitz},
title = {Modeling protein-peptide interactions using protein fragments: fitting
the pieces?},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-10}},
pages = {O1},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S10-O1},
doi = {10.1186/1471-2105-11-S10-O1},
timestamp = {Mon, 04 Jul 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/VanheeSBVSRS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/VerslyppeSVBD10,
author = {Bert Verslyppe and
Wim De Smet and
Paul De Vos and
Bernard De Baets and
Peter Dawyndt},
title = {Semantic integration of isolation habitat and location in StrainInfo},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-5}},
pages = {P3},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S5-P3},
doi = {10.1186/1471-2105-11-S5-P3},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/VerslyppeSVBD10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ViangteeravatBVKNSHM10,
author = {Teeradache Viangteeravat and
Ian M. Brooks and
Somchan Vuthipadadon and
Emin Kuscu and
Naga Nagisetty and
Ebony Smith and
Ramin Homayouni and
Chanchai McDonald},
title = {Slim-Prim: an integrated data system for clinical and translational
research},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P5},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P5},
doi = {10.1186/1471-2105-11-S4-P5},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ViangteeravatBVKNSHM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/VijayabaskarV10,
author = {M. S. Vijayabaskar and
Saraswathi Vishveshwara},
title = {Comparative analysis of thermophilic and mesophilic proteins using
Protein Energy Networks},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {49},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S49},
doi = {10.1186/1471-2105-11-S1-S49},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/VijayabaskarV10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WaigelLCACZ10,
author = {Sabine J. Waigel and
Xiaohong Li and
Yinlu Chen and
Vennila Arumugam and
Nigel G. F. Cooper and
Wolfgang Zacharias},
title = {The UofL Microarray Facility: merger and new location},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P25},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P25},
doi = {10.1186/1471-2105-11-S4-P25},
timestamp = {Thu, 28 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/WaigelLCACZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangACCCCLLMMNPTTW10,
author = {Xusheng Wang and
Richa Agarwala and
John A. Capra and
Zugen Chen and
Deanna M. Church and
Daniel C. Ciobanu and
Zhengsheng Li and
Lu Lu and
Khyobeni Mozhui and
Megan K. Mulligan and
Stanley F. Nelson and
Katherine S. Pollard and
William Taylor and
Donald B. Thomason and
Robert W. Williams},
title = {High-throughput sequencing of the {DBA/2J} mouse genome},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {O7},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-O7},
doi = {10.1186/1471-2105-11-S4-O7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WangACCCCLLMMNPTTW10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangHSL10,
author = {Xiaohong Wang and
Jun Huan and
Aaron M. Smalter and
Gerald H. Lushington},
title = {Application of kernel functions for accurate similarity search in
large chemical databases},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-3}},
pages = {8},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S3-S8},
doi = {10.1186/1471-2105-11-S3-S8},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WangHSL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangMZYRZ10,
author = {Bing Wang and
Fahim Mohammad and
Jun Zhang and
Xinmin Yin and
Eric C. Rouchka and
Xiang Zhang},
title = {Statistical analysis of multiple significance test methods for differential
proteomics},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P30},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P30},
doi = {10.1186/1471-2105-11-S4-P30},
timestamp = {Sat, 25 Feb 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WangMZYRZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WenWSHSHTS10,
author = {Zhining Wen and
Charles Wang and
Quan Shi and
Ying Huang and
Zhenqiang Su and
Huixiao Hong and
Weida Tong and
Leming Shi},
title = {Evaluation of gene expression data generated from expired Affymetrix
GeneChip\({}^{\mbox{{\textregistered}}}\) microarrays using {MAQC}
reference {RNA} samples},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S10},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S10},
doi = {10.1186/1471-2105-11-S6-S10},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WenWSHSHTS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WidmerTAR10,
author = {Christian Widmer and
Nora C. Toussaint and
Yasemin Altun and
Gunnar R{\"{a}}tsch},
title = {Inferring latent task structure for Multitask Learning by Multiple
Kernel Learning},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-8}},
pages = {S5},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S8-S5},
doi = {10.1186/1471-2105-11-S8-S5},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WidmerTAR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WilkinsonMVWKS10,
author = {Mark D. Wilkinson and
E. Luke McCarthy and
Benjamin P. Vandervalk and
David Withers and
Edward A. Kawas and
Soroush Samadian},
title = {SADI, SHARE, and the in silico scientific method},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-12}},
pages = {S7},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S12-S7},
doi = {10.1186/1471-2105-11-S12-S7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WilkinsonMVWKS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WrenKPBB10,
author = {Jonathan D. Wren and
Doris M. Kupfer and
Edward J. Perkins and
Susan Bridges and
Daniel Berleant},
title = {Proceedings of the 2010 MidSouth Computational Biology and Bioinformatics
Society {(MCBIOS)} Conference},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S1},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S1},
doi = {10.1186/1471-2105-11-S6-S1},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/WrenKPBB10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WuCCHN10,
author = {Timothy H. Wu and
Ian Chang and
Lichieh Julie Chu and
Hsuan{-}Cheng Huang and
Wailap V. Ng},
title = {Modularity of Escherichia coli sRNA regulation revealed by sRNA-target
and protein network analysis},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-7}},
pages = {S11},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S7-S11},
doi = {10.1186/1471-2105-11-S7-S11},
timestamp = {Fri, 30 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WuCCHN10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WuHPWFW10,
author = {Daniel Duanqing Wu and
Xiaohua Hu and
E. K. Park and
Xiaofeng Wang and
Jiali Feng and
Xindong Wu},
title = {Exploratory analysis of protein translation regulatory networks using
hierarchical random graphs},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-3}},
pages = {2},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S3-S2},
doi = {10.1186/1471-2105-11-S3-S2},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/WuHPWFW10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WuLCKN10,
author = {Min Wu and
Xiaoli Li and
Hon Nian Chua and
Chee Keong Kwoh and
See{-}Kiong Ng},
title = {Integrating diverse biological and computational sources for reliable
protein-protein interactions},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-7}},
pages = {S8},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S7-S8},
doi = {10.1186/1471-2105-11-S7-S8},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/WuLCKN10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WuWC10,
author = {Wu Wu and
Feng Wang and
Maw Chang},
title = {Sensitivity analysis of dynamic biological systems with time-delays},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-7}},
pages = {S12},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S7-S12},
doi = {10.1186/1471-2105-11-S7-S12},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WuWC10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Xie0J10,
author = {Minzhu Xie and
Jing Li and
Tao Jiang},
title = {Accurate {HLA} type inference using a weighted similarity graph},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-11}},
pages = {S10},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S11-S10},
doi = {10.1186/1471-2105-11-S11-S10},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/Xie0J10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/XinMLCMR10,
author = {Fuxiao Xin and
Steven A. Myers and
Yong Fuga Li and
David N. Cooper and
Sean D. Mooney and
Predrag Radivojac},
title = {Structure-based kernels for the prediction of catalytic residues and
their involvement in human inherited disease},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-10}},
pages = {O4},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S10-O4},
doi = {10.1186/1471-2105-11-S10-O4},
timestamp = {Tue, 28 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/XinMLCMR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/XuPYYYHL10,
author = {Tao Xu and
Jie Ping and
Yao Yu and
Fudong Yu and
Yongtao Yu and
Pei Hao and
Xuan Li},
title = {Revealing parasite influence in metabolic pathways in Apicomplexa
infected patients},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-11}},
pages = {S13},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S11-S13},
doi = {10.1186/1471-2105-11-S11-S13},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/XuPYYYHL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/XuWVFNHTK10,
author = {Joshua Xu and
Carolyn Wise and
Vijayalakshmi Varma and
Hong Fang and
Baitang Ning and
Huixiao Hong and
Weida Tong and
Jim Kaput},
title = {Two new ArrayTrack libraries for personalized biomedical research},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S6},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S6},
doi = {10.1186/1471-2105-11-S6-S6},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/XuWVFNHTK10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YangLHCXL10,
author = {Xinan Yang and
Younghee Lee and
Yong Huang and
James L. Chen and
H. Rosie Xing and
Yves A. Lussier},
title = {Stromal microenvironment processes unveiled by biological component
analysis of gene expression in xenograft tumor models},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-9}},
pages = {S11},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S9-S11},
doi = {10.1186/1471-2105-11-S9-S11},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YangLHCXL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YangPC10,
author = {Jianyi Yang and
Zhen{-}Ling Peng and
Xin Chen},
title = {Prediction of protein structural classes for low-homology sequences
based on predicted secondary structure},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {9},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S9},
doi = {10.1186/1471-2105-11-S1-S9},
timestamp = {Mon, 25 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YangPC10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YangPLYCC10,
author = {Bin Yang and
Yu Peng and
Henry Chi{-}Ming Leung and
Siu{-}Ming Yiu and
Jing{-}Chi Chen and
Francis Yuk{-}Lun Chin},
title = {Unsupervised binning of environmental genomic fragments based on an
error robust selection of \emph{l}-mers},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-2}},
pages = {5},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S2-S5},
doi = {10.1186/1471-2105-11-S2-S5},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YangPLYCC10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YangWYXY10,
author = {Can Yang and
Xiang Wan and
Qiang Yang and
Hong Xue and
Weichuan Yu},
title = {Identifying main effects and epistatic interactions from large-scale
{SNP} data via adaptive group Lasso},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {18},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S18},
doi = {10.1186/1471-2105-11-S1-S18},
timestamp = {Mon, 23 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YangWYXY10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YangZMMJ10,
author = {Yang Yang and
Jiayuan Zhao and
Robyn L. Morgan and
Wenbo Ma and
Tao Jiang},
title = {Computational prediction of type {III} secreted proteins from gram-negative
bacteria},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {47},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S47},
doi = {10.1186/1471-2105-11-S1-S47},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/YangZMMJ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YangZZZ10,
author = {Pengyi Yang and
Bing Bing Zhou and
Zili Zhang and
Albert Y. Zomaya},
title = {A multi-filter enhanced genetic ensemble system for gene selection
and sample classification of microarray data},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {5},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S5},
doi = {10.1186/1471-2105-11-S1-S5},
timestamp = {Thu, 20 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/YangZZZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YeturuUKC10,
author = {Kalidas Yeturu and
Tapani Utriainen and
Graham J. L. Kemp and
Nagasuma R. Chandra},
title = {An automated framework for understanding structural variations in
the binding grooves of {MHC} class {II} molecules},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {55},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S55},
doi = {10.1186/1471-2105-11-S1-S55},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YeturuUKC10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YuKOKKH10,
author = {Hwanjo Yu and
Taehoon Kim and
Jinoh Oh and
Ilhwan Ko and
Sungchul Kim and
Wook{-}Shin Han},
title = {Enabling multi-level relevance feedback on PubMed by integrating rank
learning into {DBMS}},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-2}},
pages = {6},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S2-S6},
doi = {10.1186/1471-2105-11-S2-S6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YuKOKKH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YuXYHL10,
author = {Yao Yu and
Tao Xu and
Yongtao Yu and
Pei Hao and
Xuan Li},
title = {Association of tissue lineage and gene expression: conservatively
and differentially expressed genes define common and special functions
of tissues},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-11}},
pages = {S1},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S11-S1},
doi = {10.1186/1471-2105-11-S11-S1},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/YuXYHL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhangBKR10,
author = {Lei Zhang and
James Bailey and
Arun Siddharth Konagurthu and
Kotagiri Ramamohanarao},
title = {A fast indexing approach for protein structure comparison},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {46},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S46},
doi = {10.1186/1471-2105-11-S1-S46},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhangBKR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhangL10,
author = {Melvin Zhang and
Hon Wai Leong},
title = {Bidirectional best hit \emph{r}-window gene clusters},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {63},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S63},
doi = {10.1186/1471-2105-11-S1-S63},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhangL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhangXDKBOJPH10,
author = {Jie Zhang and
Yang Xiang and
Liya Ding and
Kristin Keen{-}Circle and
Tara Borlawsky and
Hatice Gulcin Ozer and
Ruoming Jin and
Philip R. O. Payne and
Kun Huang},
title = {Using gene co-expression network analysis to predict biomarkers for
chronic lymphocytic leukemia},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-9}},
pages = {S5},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S9-S5},
doi = {10.1186/1471-2105-11-S9-S5},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhangXDKBOJPH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhaoFZC10,
author = {Nan Zhao and
Jean{-}Luc Ferrer and
Xiaofeng Zhuang and
Feng Chen},
title = {Comparative functional genomic study of substrate specificity evolution
of the {SABATH} family of methyltransferases in plants},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P7},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P7},
doi = {10.1186/1471-2105-11-S4-P7},
timestamp = {Thu, 11 Mar 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhaoFZC10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhaoHA10,
author = {Yang Zhao and
Morihiro Hayashida and
Tatsuya Akutsu},
title = {Integer programming-based method for grammar-based tree compression
and its application to pattern extraction of glycan tree structures},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-11}},
pages = {S4},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S11-S4},
doi = {10.1186/1471-2105-11-S11-S4},
timestamp = {Wed, 06 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhaoHA10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhouZC10,
author = {Ao Zhou and
Fan Zhang and
Jake Y. Chen},
title = {{PEPPI:} a peptidomic database of human protein isoforms for proteomics
experiments},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-6}},
pages = {S7},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S6-S7},
doi = {10.1186/1471-2105-11-S6-S7},
timestamp = {Fri, 29 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhouZC10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZiebarthLMC10,
author = {Jesse D. Ziebarth and
Bao Li and
Isao Miyairi and
Yan Cui},
title = {Linking genotype to phenotype with Bayesian network modeling of \emph{Chlamydia}
infection},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P19},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P19},
doi = {10.1186/1471-2105-11-S4-P19},
timestamp = {Mon, 25 Jan 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZiebarthLMC10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GanguliMBRMD10a,
title = {In silico screening of herbal and nanoparticle lead compounds for
effectivity against H5N1, {H1N1} neuraminidase and telomerase},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {13},
year = {2010},
note = {Withdrawn.},
url = {https://doi.org/10.1186/1471-2105-11-S1-S13},
doi = {10.1186/1471-2105-11-S1-S13},
timestamp = {Tue, 08 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/GanguliMBRMD10a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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