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@article{DBLP:journals/bmcsb/AwadC14,
  author       = {Sherine Awad and
                  Jin Chen},
  title        = {Inferring transcription factor collaborations in gene regulatory networks},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-1}},
  pages        = {S1},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S1-S1},
  doi          = {10.1186/1752-0509-8-S1-S1},
  timestamp    = {Tue, 16 Aug 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/AwadC14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/BarterSMY14,
  author       = {Rebecca L. Barter and
                  Sarah{-}Jane Schramm and
                  Graham J. Mann and
                  Yee Hwa Yang},
  title        = {Network-based biomarkers enhance classical approaches to prognostic
                  gene expression signatures},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-4}},
  pages        = {S5},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S4-S5},
  doi          = {10.1186/1752-0509-8-S4-S5},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/BarterSMY14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/ChenJZJ14,
  author       = {Yong Chen and
                  Thibault Jacquemin and
                  Shuyan Zhang and
                  Rui Jiang},
  title        = {Prioritizing protein complexes implicated in human diseases by network
                  optimization},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-1}},
  pages        = {S2},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S1-S2},
  doi          = {10.1186/1752-0509-8-S1-S2},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/ChenJZJ14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/ChenMZLZ14,
  author       = {Haifen Chen and
                  Piyushkumar A. Mundra and
                  Li Na Zhao and
                  Feng Lin and
                  Jie Zheng},
  title        = {Highly sensitive inference of time-delayed gene regulation by network
                  deconvolution},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-4}},
  pages        = {S6},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S4-S6},
  doi          = {10.1186/1752-0509-8-S4-S6},
  timestamp    = {Mon, 07 Jun 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/ChenMZLZ14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/ChinCWHKL14,
  author       = {Chia{-}Hao Chin and
                  Shu{-}Hwa Chen and
                  Hsin{-}Hung Wu and
                  Chin{-}Wen Ho and
                  Ming{-}Tat Ko and
                  Chung{-}Yen Lin},
  title        = {cytoHubba: identifying hub objects and sub-networks from complex interactome},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-4}},
  pages        = {S11},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S4-S11},
  doi          = {10.1186/1752-0509-8-S4-S11},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/ChinCWHKL14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/ConesaM14,
  author       = {Ana Conesa and
                  Ali Mortazavi},
  title        = {The common ground of genomics and systems biology},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-2}},
  pages        = {S1},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S2-S1},
  doi          = {10.1186/1752-0509-8-S2-S1},
  timestamp    = {Fri, 17 Nov 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcsb/ConesaM14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/GanegodaWWL14,
  author       = {Gamage Upeksha Ganegoda and
                  Jianxin Wang and
                  Fang{-}Xiang Wu and
                  Min Li},
  title        = {Prediction of disease genes using tissue-specified gene-gene network},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-3}},
  pages        = {S3},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S3-S3},
  doi          = {10.1186/1752-0509-8-S3-S3},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/GanegodaWWL14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/Gomez-CabreroAMTMGBBCT14,
  author       = {David Gomez{-}Cabrero and
                  Imad Abugessaisa and
                  Dieter Maier and
                  Andrew E. Teschendorff and
                  Matthias Merkenschlager and
                  Andreas Gisel and
                  Esteban Ballestar and
                  Erik Bongcam{-}Rudloff and
                  Ana Conesa and
                  Jesper Tegn{\'{e}}r},
  title        = {Data integration in the era of omics: current and future challenges},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-2}},
  pages        = {I1},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S2-I1},
  doi          = {10.1186/1752-0509-8-S2-I1},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/Gomez-CabreroAMTMGBBCT14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/GongF14,
  author       = {Haijun Gong and
                  Lu Feng},
  title        = {Computational analysis of the roles of ER-Golgi network in the cell
                  cycle},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-4}},
  pages        = {S3},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S4-S3},
  doi          = {10.1186/1752-0509-8-S4-S3},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/GongF14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/GongWC14,
  author       = {Haijun Gong and
                  Tong Tong Wu and
                  Edmund M. Clarke},
  title        = {Pathway-gene identification for pancreatic cancer survival via doubly
                  regularized Cox regression},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-1}},
  pages        = {S3},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S1-S3},
  doi          = {10.1186/1752-0509-8-S1-S3},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/GongWC14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/HeWQZ14,
  author       = {Jieyue He and
                  Chunyan Wang and
                  Kunpu Qiu and
                  Wei Zhong},
  title        = {An novel frequent probability pattern mining algorithm based on circuit
                  simulation method in uncertain biological networks},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-3}},
  pages        = {S6},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S3-S6},
  doi          = {10.1186/1752-0509-8-S3-S6},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/HeWQZ14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/Hernandez-de-DiegoBGTAC14,
  author       = {Rafael Hern{\'{a}}ndez{-}de{-}Diego and
                  Noemi Boix{-}Chova and
                  David Gomez{-}Cabrero and
                  Jesper Tegn{\'{e}}r and
                  Imad Abugessaisa and
                  Ana Conesa},
  title        = {STATegra {EMS:} an Experiment Management System for complex next-generation
                  omics experiments},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-2}},
  pages        = {S9},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S2-S9},
  doi          = {10.1186/1752-0509-8-S2-S9},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/Hernandez-de-DiegoBGTAC14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/HsuYLHC14,
  author       = {Chih{-}Yuan Hsu and
                  Tsu{-}Chun Yu and
                  Ling{-}Jiun Lin and
                  Rei{-}Hsing Hu and
                  Bor{-}Sen Chen},
  title        = {Systematic approach to Escherichia coli cell population control using
                  a genetic lysis circuit},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-5}},
  pages        = {S7},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S5-S7},
  doi          = {10.1186/1752-0509-8-S5-S7},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/HsuYLHC14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/KinoshitaIUT14,
  author       = {Ryoichi Kinoshita and
                  Mitsuo Iwadate and
                  Hideaki Umeyama and
                  Y{-}h. Taguchi},
  title        = {Genes associated with genotype-specific {DNA} methylation in squamous
                  cell carcinoma as candidate drug targets},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-1}},
  pages        = {S4},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S1-S4},
  doi          = {10.1186/1752-0509-8-S1-S4},
  timestamp    = {Tue, 16 Aug 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/KinoshitaIUT14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/KogelmanK14,
  author       = {Lisette J. A. Kogelman and
                  Haja N. Kadarmideen},
  title        = {Weighted Interaction {SNP} Hub {(WISH)} network method for building
                  genetic networks for complex diseases and traits using whole genome
                  genotype data},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-2}},
  pages        = {S5},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S2-S5},
  doi          = {10.1186/1752-0509-8-S2-S5},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/KogelmanK14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/LaiCHW14,
  author       = {Fu{-}Jou Lai and
                  Hong{-}Tsun Chang and
                  Yueh{-}Min Huang and
                  Wei{-}Sheng Wu},
  title        = {A comprehensive performance evaluation on the prediction results of
                  existing cooperative transcription factors identification algorithms},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-4}},
  pages        = {S9},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S4-S9},
  doi          = {10.1186/1752-0509-8-S4-S9},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/LaiCHW14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/LaiJCHW14,
  author       = {Fu{-}Jou Lai and
                  Mei{-}Huei Jhu and
                  Chia{-}Chun Chiu and
                  Yueh{-}Min Huang and
                  Wei{-}Sheng Wu},
  title        = {Identifying cooperative transcription factors in yeast using multiple
                  data sources},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-5}},
  pages        = {S2},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S5-S2},
  doi          = {10.1186/1752-0509-8-S5-S2},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/LaiJCHW14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/LinLWLCCLHC14,
  author       = {Che Lin and
                  Chin{-}Nan Lin and
                  Yu{-}Chao Wang and
                  Fang{-}Yu Liu and
                  Yu{-}Wen Chien and
                  Yung{-}Jen Chuang and
                  Chung{-}Yu Lan and
                  Wen{-}Ping Hsieh and
                  Bor{-}Sen Chen},
  title        = {Robustness analysis on interspecies interaction network for iron and
                  glucose competition between Candida albicans and zebrafish during
                  infection},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-5}},
  pages        = {S6},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S5-S6},
  doi          = {10.1186/1752-0509-8-S5-S6},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/LinLWLCCLHC14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/LiuDPDMCW14,
  author       = {Sheng Liu and
                  Shamitha Dissanayake and
                  Sanjay Patel and
                  Xin Dang and
                  Todd Mlsna and
                  Yixin Chen and
                  Dawn Wilkins},
  title        = {Learning accurate and interpretable models based on regularized random
                  forests regression},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-3}},
  pages        = {S5},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S3-S5},
  doi          = {10.1186/1752-0509-8-S3-S5},
  timestamp    = {Wed, 11 Jan 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcsb/LiuDPDMCW14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/LiuWLWZSWQZ14,
  author       = {Hui Liu and
                  Tongtong Wang and
                  Hongbo Liu and
                  Yanjun Wei and
                  Guofeng Zhao and
                  Jianzhong Su and
                  Qiong Wu and
                  Hong Qiao and
                  Yan Zhang},
  title        = {Detection of type 2 diabetes related modules and genes based on epigenetic
                  networks},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-1}},
  pages        = {S5},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S1-S5},
  doi          = {10.1186/1752-0509-8-S1-S5},
  timestamp    = {Thu, 15 Oct 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/LiuWLWZSWQZ14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/LiuWZ14,
  author       = {Li{-}Zhi Liu and
                  Fang{-}Xiang Wu and
                  Wen{-}Jun Zhang},
  title        = {A group LASSO-based method for robustly inferring gene regulatory
                  networks from multiple time-course datasets},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-3}},
  pages        = {S1},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S3-S1},
  doi          = {10.1186/1752-0509-8-S3-S1},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcsb/LiuWZ14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/MaedaK14,
  author       = {Kazuhiro Maeda and
                  Hiroyuki Kurata},
  title        = {Analytical study of robustness of a negative feedback oscillator by
                  multiparameter sensitivity},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-5}},
  pages        = {S1},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S5-S1},
  doi          = {10.1186/1752-0509-8-S5-S1},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/MaedaK14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/MencheSCMRCMLTGLBRASB14,
  author       = {J{\"{o}}rg Menche and
                  Amitabh Sharma and
                  Michael H. Cho and
                  Ruth J. Mayer and
                  Stephen I. Rennard and
                  Bartolome Celli and
                  Bruce E. Miller and
                  Nick Locantore and
                  Ruth Tal{-}Singer and
                  Soumitra Ghosh and
                  Chris Larminie and
                  Glyn Bradley and
                  John H. Riley and
                  Alvar Agusti and
                  Edwin K. Silverman and
                  Albert{-}L{\'{a}}szl{\'{o}} Barab{\'{a}}si},
  title        = {A diVIsive Shuffling Approach (VIStA) for gene expression analysis
                  to identify subtypes in Chronic Obstructive Pulmonary Disease},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-2}},
  pages        = {S8},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S2-S8},
  doi          = {10.1186/1752-0509-8-S2-S8},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/MencheSCMRCMLTGLBRASB14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/MoriyaYK14,
  author       = {Takefumi Moriya and
                  Masayuki Yamamura and
                  Daisuke Kiga},
  title        = {Effects of downstream genes on synthetic genetic circuits},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-4}},
  pages        = {S4},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S4-S4},
  doi          = {10.1186/1752-0509-8-S4-S4},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/MoriyaYK14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/PatilN14,
  author       = {Ashwini Patil and
                  Kenta Nakai},
  title        = {TimeXNet: Identifying active gene sub-networks using time-course gene
                  expression profiles},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-4}},
  pages        = {S2},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S4-S2},
  doi          = {10.1186/1752-0509-8-S4-S2},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/PatilN14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/PengLJWC14,
  author       = {Jiajie Peng and
                  Hongxiang Li and
                  Qinghua Jiang and
                  Yadong Wang and
                  Jin Chen},
  title        = {An integrative approach for measuring semantic similarities using
                  gene ontology},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-5}},
  pages        = {S8},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S5-S8},
  doi          = {10.1186/1752-0509-8-S5-S8},
  timestamp    = {Sun, 25 Jul 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/PengLJWC14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/PonzoniNTGMDDC14,
  author       = {Ignacio Ponzoni and
                  Mar{\'{\i}}a Jos{\'{e}} Nueda and
                  Sonia Tarazona and
                  Stefan G{\"{o}}tz and
                  David Montaner and
                  Julieta Sol Dussaut and
                  Joaqu{\'{\i}}n Dopazo and
                  Ana Conesa},
  title        = {Pathway network inference from gene expression data},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-2}},
  pages        = {S7},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S2-S7},
  doi          = {10.1186/1752-0509-8-S2-S7},
  timestamp    = {Thu, 02 Dec 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcsb/PonzoniNTGMDDC14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/QianBMS14,
  author       = {Yu Qian and
                  S{\o}ren Besenbacher and
                  Thomas Mailund and
                  Mikkel Heide Schierup},
  title        = {Identifying disease associated genes by network propagation},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-1}},
  pages        = {S6},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S1-S6},
  doi          = {10.1186/1752-0509-8-S1-S6},
  timestamp    = {Tue, 16 Aug 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/QianBMS14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/QiuTCA14,
  author       = {Yushan Qiu and
                  Takeyuki Tamura and
                  Wai{-}Ki Ching and
                  Tatsuya Akutsu},
  title        = {On control of singleton attractors in multiple Boolean networks: integer
                  programming-based method},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-1}},
  pages        = {S7},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S1-S7},
  doi          = {10.1186/1752-0509-8-S1-S7},
  timestamp    = {Fri, 09 Apr 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/QiuTCA14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/RanganathanTS14,
  author       = {Shoba Ranganathan and
                  Tin Wee Tan and
                  Christian Sch{\"{o}}nbach},
  title        = {InCoB2014: Systems Biology update from the Asia-Pacific},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-4}},
  pages        = {I1},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S4-I1},
  doi          = {10.1186/1752-0509-8-S4-I1},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/RanganathanTS14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/ReshetovaSKW14,
  author       = {Polina Reshetova and
                  Age K. Smilde and
                  Antoine H. C. van Kampen and
                  Johan A. Westerhuis},
  title        = {Use of prior knowledge for the analysis of high-throughput transcriptomics
                  and metabolomics data},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-2}},
  pages        = {S2},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S2-S2},
  doi          = {10.1186/1752-0509-8-S2-S2},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/ReshetovaSKW14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/ReverterVO14,
  author       = {Ferran Reverter and
                  Esteban Vegas and
                  Josep M. Oller},
  title        = {Kernel-PCA data integration with enhanced interpretability},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-2}},
  pages        = {S6},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S2-S6},
  doi          = {10.1186/1752-0509-8-S2-S6},
  timestamp    = {Fri, 17 Nov 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcsb/ReverterVO14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/SchmidtFI14,
  author       = {Andreas Schmidt and
                  Ignasi Forne and
                  Axel Imhof},
  title        = {Bioinformatic analysis of proteomics data},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-2}},
  pages        = {S3},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S2-S3},
  doi          = {10.1186/1752-0509-8-S2-S3},
  timestamp    = {Tue, 15 Nov 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcsb/SchmidtFI14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/SrihariMSLSKR14,
  author       = {Sriganesh Srihari and
                  Piyush B. Madhamshettiwar and
                  Sarah Song and
                  Chao Liu and
                  Peter T. Simpson and
                  Kum Khanna and
                  Mark A. Ragan},
  title        = {Complex-based analysis of dysregulated cellular processes in cancer},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-4}},
  pages        = {S1},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S4-S1},
  doi          = {10.1186/1752-0509-8-S4-S1},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/SrihariMSLSKR14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/SriyudthsakSCYKOFNVSH14,
  author       = {Kansuporn Sriyudthsak and
                  Yuji Sawada and
                  Yukako Chiba and
                  Yui Yamashita and
                  Shigehiko Kanaya and
                  Hitoshi Onouchi and
                  Toru Fujiwara and
                  Satoshi Naito and
                  Eberhard O. Voit and
                  Fumihide Shiraishi and
                  Masami Y. Hirai},
  title        = {A U-system approach for predicting metabolic behaviors and responses
                  based on an alleged metabolic reaction network},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-5}},
  pages        = {S4},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S5-S4},
  doi          = {10.1186/1752-0509-8-S5-S4},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcsb/SriyudthsakSCYKOFNVSH14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/SunKT14,
  author       = {Shuhao Sun and
                  Fima C. Klebaner and
                  Tianhai Tian},
  title        = {A new model of time scheme for progression of colorectal cancer},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-3}},
  pages        = {S2},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S3-S2},
  doi          = {10.1186/1752-0509-8-S3-S2},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/SunKT14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/TianS14,
  author       = {Tianhai Tian and
                  Kate Smith{-}Miles},
  title        = {Mathematical modeling of GATA-switching for regulating the differentiation
                  of hematopoietic stem cell},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-1}},
  pages        = {S8},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S1-S8},
  doi          = {10.1186/1752-0509-8-S1-S8},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/TianS14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/TomescuMT14,
  author       = {Oana A. Tomescu and
                  Diethard Mattanovich and
                  Gerhard G. Thallinger},
  title        = {Integrative omics analysis. {A} study based on Plasmodium falciparum
                  mRNA and protein data},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-2}},
  pages        = {S4},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S2-S4},
  doi          = {10.1186/1752-0509-8-S2-S4},
  timestamp    = {Fri, 17 Nov 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcsb/TomescuMT14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/WangKG14,
  author       = {Xiaolei Wang and
                  Hiroyuki Kuwahara and
                  Xin Gao},
  title        = {Modeling {DNA} affinity landscape through two-round support vector
                  regression with weighted degree kernels},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-5}},
  pages        = {S5},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S5-S5},
  doi          = {10.1186/1752-0509-8-S5-S5},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/WangKG14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/WangQ14,
  author       = {Yijie Wang and
                  Xiaoning Qian},
  title        = {Joint clustering of protein interaction networks through Markov random
                  walk},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-1}},
  pages        = {S9},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S1-S9},
  doi          = {10.1186/1752-0509-8-S1-S9},
  timestamp    = {Mon, 01 Mar 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcsb/WangQ14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/WuWYC14,
  author       = {Wei{-}Sheng Wu and
                  Ming{-}Liang Wei and
                  Chia{-}Ming Yeh and
                  Darby Tien{-}Hao Chang},
  title        = {A regulatory similarity measure using the location information of
                  transcription factor binding sites in Saccharomyces cerevisiae},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-5}},
  pages        = {S9},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S5-S9},
  doi          = {10.1186/1752-0509-8-S5-S9},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/WuWYC14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/XiZWW14,
  author       = {Yanping Xi and
                  Yue Zhao and
                  Li Wang and
                  Fei Wang},
  title        = {Comparison on extreme pathways reveals nature of different biological
                  processes},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-1}},
  pages        = {S10},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S1-S10},
  doi          = {10.1186/1752-0509-8-S1-S10},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/XiZWW14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/YanW14,
  author       = {Changhui Yan and
                  Yingfeng Wang},
  title        = {A graph kernel method for DNA-binding site prediction},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-4}},
  pages        = {S10},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S4-S10},
  doi          = {10.1186/1752-0509-8-S4-S10},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/YanW14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/YangSOCLN14,
  author       = {Peng Yang and
                  Xiaoquan Su and
                  Le Ou{-}Yang and
                  Hon Nian Chua and
                  Xiaoli Li and
                  Kang Ning},
  title        = {Microbial community pattern detection in human body habitats via ensemble
                  clustering framework},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-4}},
  pages        = {S7},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S4-S7},
  doi          = {10.1186/1752-0509-8-S4-S7},
  timestamp    = {Tue, 29 Dec 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcsb/YangSOCLN14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/YangWHW14,
  author       = {Tzu{-}Hsien Yang and
                  Chung{-}Ching Wang and
                  Po{-}Cheng Hung and
                  Wei{-}Sheng Wu},
  title        = {cisMEP: an integrated repository of genomic epigenetic profiles and
                  cis-regulatory modules in Drosophila},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-4}},
  pages        = {S8},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S4-S8},
  doi          = {10.1186/1752-0509-8-S4-S8},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/YangWHW14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/YongMW14,
  author       = {Chern Han Yong and
                  Osamu Maruyama and
                  Limsoon Wong},
  title        = {Discovery of small protein complexes from {PPI} networks with size-specific
                  supervised weighting},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-5}},
  pages        = {S3},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S5-S3},
  doi          = {10.1186/1752-0509-8-S5-S3},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/YongMW14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/YuY0LWY14,
  author       = {Feng Yu and
                  Zhi{-}Hao Yang and
                  Nan Tang and
                  Hong Lin and
                  Jian Wang and
                  Zhiwei Yang},
  title        = {Predicting protein complex in protein interaction network - a supervised
                  learning based method},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-3}},
  pages        = {S4},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S3-S4},
  doi          = {10.1186/1752-0509-8-S3-S4},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/YuY0LWY14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
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