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export results for "Ron Caspi"
download as .bib file
@article{DBLP:journals/bib/KarpMBKKLOSCFKP21,
author = {Peter D. Karp and
Peter E. Midford and
Richard Billington and
Anamika Kothari and
Markus Krummenacker and
Mario Latendresse and
Wai Kit Ong and
Pallavi Subhraveti and
Ron Caspi and
Carol A. Fulcher and
Ingrid M. Keseler and
Suzanne M. Paley},
title = {Pathway Tools version 23.0 update: software for pathway/genome informatics
and systems biology},
journal = {Briefings Bioinform.},
volume = {22},
number = {1},
pages = {109--126},
year = {2021},
url = {https://doi.org/10.1093/bib/bbz104},
doi = {10.1093/BIB/BBZ104},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/KarpMBKKLOSCFKP21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CaspiBKKKMOPSK20,
author = {Ron Caspi and
Richard Billington and
Ingrid M. Keseler and
Anamika Kothari and
Markus Krummenacker and
Peter E. Midford and
Wai Kit Ong and
Suzanne M. Paley and
Pallavi Subhraveti and
Peter D. Karp},
title = {The MetaCyc database of metabolic pathways and enzymes - a 2019 update},
journal = {Nucleic Acids Res.},
volume = {48},
number = {Database-Issue},
pages = {D445--D453},
year = {2020},
url = {https://doi.org/10.1093/nar/gkz862},
doi = {10.1093/NAR/GKZ862},
timestamp = {Sat, 25 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/CaspiBKKKMOPSK20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/KarpBCFLKKKMOOP19,
author = {Peter D. Karp and
Richard Billington and
Ron Caspi and
Carol A. Fulcher and
Mario Latendresse and
Anamika Kothari and
Ingrid M. Keseler and
Markus Krummenacker and
Peter E. Midford and
Quang Ong and
Wai Kit Ong and
Suzanne M. Paley and
Pallavi Subhraveti},
title = {The BioCyc collection of microbial genomes and metabolic pathways},
journal = {Briefings Bioinform.},
volume = {20},
number = {4},
pages = {1085--1093},
year = {2019},
url = {https://doi.org/10.1093/bib/bbx085},
doi = {10.1093/BIB/BBX085},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/KarpBCFLKKKMOOP19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CaspiBFKKKLMOOP18,
author = {Ron Caspi and
Richard Billington and
Carol A. Fulcher and
Ingrid M. Keseler and
Anamika Kothari and
Markus Krummenacker and
Mario Latendresse and
Peter E. Midford and
Quang Ong and
Wai Kit Ong and
Suzanne M. Paley and
Pallavi Subhraveti and
Peter D. Karp},
title = {The MetaCyc database of metabolic pathways and enzymes},
journal = {Nucleic Acids Res.},
volume = {46},
number = {Database-Issue},
pages = {D633--D639},
year = {2018},
url = {https://doi.org/10.1093/nar/gkx935},
doi = {10.1093/NAR/GKX935},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/CaspiBFKKKLMOOP18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KeselerMSBBCFGK17,
author = {Ingrid M. Keseler and
Amanda Mackie and
Alberto Santos{-}Zavaleta and
Richard Billington and
C{\'{e}}sar Bonavides{-}Mart{\'{\i}}nez and
Ron Caspi and
Carol A. Fulcher and
Socorro Gama{-}Castro and
Anamika Kothari and
Markus Krummenacker and
Mario Latendresse and
Luis Mu{\~{n}}iz{-}Rascado and
Quang Ong and
Suzanne M. Paley and
Mart{\'{\i}}n Peralta{-}Gil and
Pallavi Subhraveti and
David A. Vel{\'{a}}zquez{-}Ram{\'{\i}}rez and
Daniel S. Weaver and
Julio Collado{-}Vides and
Ian T. Paulsen and
Peter D. Karp},
title = {The EcoCyc database: reflecting new knowledge about Escherichia coli
{K-12}},
journal = {Nucleic Acids Res.},
volume = {45},
number = {Database-Issue},
pages = {D543--D550},
year = {2017},
url = {https://doi.org/10.1093/nar/gkw1003},
doi = {10.1093/NAR/GKW1003},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KeselerMSBBCFGK17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/KarpLPKOBKWLSSF16,
author = {Peter D. Karp and
Mario Latendresse and
Suzanne M. Paley and
Markus Krummenacker and
Quang Ong and
Richard Billington and
Anamika Kothari and
Daniel S. Weaver and
Thomas J. Lee and
Pallavi Subhraveti and
Aaron Spaulding and
Carol A. Fulcher and
Ingrid M. Keseler and
Ron Caspi},
title = {Pathway Tools version 19.0 update: software for pathway/genome informatics
and systems biology},
journal = {Briefings Bioinform.},
volume = {17},
number = {5},
pages = {877--890},
year = {2016},
url = {https://doi.org/10.1093/bib/bbv079},
doi = {10.1093/BIB/BBV079},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/KarpLPKOBKWLSSF16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CaspiBFFFKKKLMO16,
author = {Ron Caspi and
Richard Billington and
Luciana Ferrer and
Hartmut Foerster and
Carol A. Fulcher and
Ingrid M. Keseler and
Anamika Kothari and
Markus Krummenacker and
Mario Latendresse and
Lukas A. Mueller and
Quang Ong and
Suzanne M. Paley and
Pallavi Subhraveti and
Daniel S. Weaver and
Peter D. Karp},
title = {The MetaCyc database of metabolic pathways and enzymes and the BioCyc
collection of pathway/genome databases},
journal = {Nucleic Acids Res.},
volume = {44},
number = {Database-Issue},
pages = {471--480},
year = {2016},
url = {https://doi.org/10.1093/nar/gkv1164},
doi = {10.1093/NAR/GKV1164},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/CaspiBFFFKKKLMO16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CaspiABDFFHKKKKLMOPSWWZK14,
author = {Ron Caspi and
Tomer Altman and
Richard Billington and
Kate Dreher and
Hartmut Foerster and
Carol A. Fulcher and
Timothy A. Holland and
Ingrid M. Keseler and
Anamika Kothari and
Aya Kubo and
Markus Krummenacker and
Mario Latendresse and
Lukas A. Mueller and
Quang Ong and
Suzanne M. Paley and
Pallavi Subhraveti and
Daniel S. Weaver and
Deepika Weerasinghe and
Peifen Zhang and
Peter D. Karp},
title = {The MetaCyc database of metabolic pathways and enzymes and the BioCyc
collection of Pathway/Genome Databases},
journal = {Nucleic Acids Res.},
volume = {42},
number = {Database-Issue},
pages = {459--471},
year = {2014},
url = {https://doi.org/10.1093/nar/gkt1103},
doi = {10.1093/NAR/GKT1103},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/CaspiABDFFHKKKKLMOPSWWZK14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AltmanTKCK13,
author = {Tomer Altman and
Michael Travers and
Anamika Kothari and
Ron Caspi and
Peter D. Karp},
title = {A systematic comparison of the MetaCyc and {KEGG} pathway databases},
journal = {{BMC} Bioinform.},
volume = {14},
pages = {112},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-112},
doi = {10.1186/1471-2105-14-112},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AltmanTKCK13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CaspiADFSKKKLMOPPSTWZK12,
author = {Ron Caspi and
Tomer Altman and
Kate Dreher and
Carol A. Fulcher and
Pallavi Subhraveti and
Ingrid M. Keseler and
Anamika Kothari and
Markus Krummenacker and
Mario Latendresse and
Lukas A. Mueller and
Quang Ong and
Suzanne M. Paley and
Anuradha Pujar and
Alexander Glennon Shearer and
Michael Travers and
Deepika Weerasinghe and
Peifen Zhang and
Peter D. Karp},
title = {The MetaCyc database of metabolic pathways and enzymes and the BioCyc
collection of pathway/genome databases},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {742--753},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1014},
doi = {10.1093/NAR/GKR1014},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/CaspiADFSKKKLMOPPSTWZK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/KarpPKLDLKGSPAPKC10,
author = {Peter D. Karp and
Suzanne M. Paley and
Markus Krummenacker and
Mario Latendresse and
Joseph M. Dale and
Thomas J. Lee and
Pallavi Kaipa and
Fred Gilham and
Aaron Spaulding and
Liviu Popescu and
Tomer Altman and
Ian T. Paulsen and
Ingrid M. Keseler and
Ron Caspi},
title = {Pathway Tools version 13.0: integrated software for pathway/genome
informatics and systems biology},
journal = {Briefings Bioinform.},
volume = {11},
number = {1},
pages = {40--79},
year = {2010},
url = {https://doi.org/10.1093/bib/bbp043},
doi = {10.1093/BIB/BBP043},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/KarpPKLDLKGSPAPKC10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CaspiADDFGKKKKLMPPPSZK10,
author = {Ron Caspi and
Tomer Altman and
Joseph M. Dale and
Kate Dreher and
Carol A. Fulcher and
Fred Gilham and
Pallavi Kaipa and
Athikkattuvalasu S. Karthikeyan and
Anamika Kothari and
Markus Krummenacker and
Mario Latendresse and
Lukas A. Mueller and
Suzanne M. Paley and
Liviu Popescu and
Anuradha Pujar and
Alexander Glennon Shearer and
Peifen Zhang and
Peter D. Karp},
title = {The MetaCyc database of metabolic pathways and enzymes and the BioCyc
collection of pathway/genome databases},
journal = {Nucleic Acids Res.},
volume = {38},
number = {Database-Issue},
pages = {473--479},
year = {2010},
url = {https://doi.org/10.1093/nar/gkp875},
doi = {10.1093/NAR/GKP875},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/CaspiADDFGKKKKLMPPPSZK10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CaspiFFKKLPRSTWZK08,
author = {Ron Caspi and
Hartmut Foerster and
Carol A. Fulcher and
Pallavi Kaipa and
Markus Krummenacker and
Mario Latendresse and
Suzanne M. Paley and
Seung Yon Rhee and
Alexander Glennon Shearer and
Christophe Tissier and
Thomas C. Walk and
Peifen Zhang and
Peter D. Karp},
title = {The MetaCyc Database of metabolic pathways and enzymes and the BioCyc
collection of Pathway/Genome Databases},
journal = {Nucleic Acids Res.},
volume = {36},
number = {Database-Issue},
pages = {623--631},
year = {2008},
url = {https://doi.org/10.1093/nar/gkm900},
doi = {10.1093/NAR/GKM900},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/CaspiFFKKLPRSTWZK08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CaspiFFHIKKPPRTZK06,
author = {Ron Caspi and
Hartmut Foerster and
Carol A. Fulcher and
Rebecca Hopkinson and
John Ingraham and
Pallavi Kaipa and
Markus Krummenacker and
Suzanne M. Paley and
John Pick and
Seung Yon Rhee and
Christophe Tissier and
Peifen Zhang and
Peter D. Karp},
title = {MetaCyc: a multiorganism database of metabolic pathways and enzymes},
journal = {Nucleic Acids Res.},
volume = {34},
number = {Database-Issue},
pages = {511--516},
year = {2006},
url = {https://doi.org/10.1093/nar/gkj128},
doi = {10.1093/NAR/GKJ128},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/CaspiFFHIKKPPRTZK06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YanaiBSCSOBHSDLS05,
author = {Itai Yanai and
Hila Benjamin{-}Rodrig and
Michael Shmoish and
Vered Chalifa{-}Caspi and
Maxim Shklar and
Ron Ophir and
Arren Bar{-}Even and
Shirley Horn{-}Saban and
Marilyn Safran and
Eytan Domany and
Doron Lancet and
Orit Shmueli},
title = {Genome-wide midrange transcription profiles reveal expression level
relationships in human tissue specification},
journal = {Bioinform.},
volume = {21},
number = {5},
pages = {650--659},
year = {2005},
url = {https://doi.org/10.1093/bioinformatics/bti042},
doi = {10.1093/BIOINFORMATICS/BTI042},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YanaiBSCSOBHSDLS05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/Chalifa-CaspiSBRSYOKSL03,
author = {Vered Chalifa{-}Caspi and
Orit Shmueli and
Hila Benjamin{-}Rodrig and
Naomi Rosen and
Michael Shmoish and
Itai Yanai and
Ron Ophir and
Pavel Kats and
Marilyn Safran and
Doron Lancet},
title = {GeneAnnot: Interfacing GeneCards with high-throughput gene expression
compendia},
journal = {Briefings Bioinform.},
volume = {4},
number = {4},
pages = {349--360},
year = {2003},
url = {https://doi.org/10.1093/bib/4.4.349},
doi = {10.1093/BIB/4.4.349},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/Chalifa-CaspiSBRSYOKSL03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/SafranCSRBOYSL03,
author = {Marilyn Safran and
Vered Chalifa{-}Caspi and
Orit Shmueli and
Naomi Rosen and
Hila Benjamin{-}Rodrig and
Ron Ophir and
Itai Yanai and
Michael Shmoish and
Doron Lancet},
title = {The GeneCardsTM Family of Databases: GeneCards, GeneLoc, GeneNote
and GeneAnnot},
booktitle = {2nd {IEEE} Computer Society Bioinformatics Conference, {CSB} 2003,
Stanford, CA, USA, August 11-14, 2003},
pages = {427--428},
publisher = {{IEEE} Computer Society},
year = {2003},
url = {https://doi.org/10.1109/CSB.2003.1227357},
doi = {10.1109/CSB.2003.1227357},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/csb/SafranCSRBOYSL03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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