- 2013
- Paola Bonizzoni, Riccardo Dondi, Yuri Pirola:
Maximum Disjoint Paths on Edge-Colored Graphs: Approximability and Tractability. Algorithms 6(1): 1-11 (2013) - Paola Bonizzoni, Gianluca Della Vedova, Riccardo Dondi, Yuri Pirola:
Parameterized complexity of k-anonymity: hardness and tractability. J. Comb. Optim. 26(1): 19-43 (2013) - Yuri Pirola, Gianluca Della Vedova, Paola Bonizzoni, Alessandra Stella, Filippo Biscarini:
Haplotype-based prediction of gene alleles using pedigrees and SNP genotypes. BCB 2013: 33 - Niko Beerenwinkel, Stefano Beretta, Paola Bonizzoni, Riccardo Dondi, Yuri Pirola:
Covering Pairs in Directed Acyclic Graphs. CoRR abs/1310.5037 (2013) - 2012
- Yuri Pirola, Raffaella Rizzi, Ernesto Picardi, Graziano Pesole, Gianluca Della Vedova, Paola Bonizzoni:
PIntron: a fast method for detecting the gene structure due to alternative splicing via maximal pairings of a pattern and a text. BMC Bioinform. 13(S-5): S2 (2012) - Yuri Pirola, Paola Bonizzoni, Tao Jiang:
An Efficient Algorithm for Haplotype Inference on Pedigrees with Recombinations and Mutations. IEEE ACM Trans. Comput. Biol. Bioinform. 9(1): 12-25 (2012) - Yuri Pirola, Gianluca Della Vedova, Stefano Biffani, Alessandra Stella, Paola Bonizzoni:
A Fast and Practical Approach to Genotype Phasing and Imputation on a Pedigree with Erroneous and Incomplete Information. IEEE ACM Trans. Comput. Biol. Bioinform. 9(6): 1582-1594 (2012) - Leonardo Vanneschi, Yuri Pirola, Giancarlo Mauri, Marco Tomassini, Philippe Collard, Sébastien Vérel:
A study of the neutrality of Boolean function landscapes in genetic programming. Theor. Comput. Sci. 425: 34-57 (2012) - Yuri Pirola, Gianluca Della Vedova, Stefano Biffani, Alessandra Stella, Paola Bonizzoni:
A fast and practical approach to genotype phasing and imputation on a pedigree with erroneous and incomplete information. ICCABS 2012: 1-6 - 2011
- Paola Bonizzoni, Gianluca Della Vedova, Yuri Pirola, Raffaella Rizzi:
PIntron: A fast method for gene structure prediction via maximal pairings of a pattern and a text. ICCABS 2011: 33-39 - Yuri Pirola, Gianluca Della Vedova, Stefano Biffani, Alessandra Stella, Paola Bonizzoni:
Haplotype Inference on Pedigrees with Recombinations, Errors, and Missing Genotypes via SAT solvers. CoRR abs/1107.3724 (2011) - 2010
- Paola Bonizzoni, Gianluca Della Vedova, Riccardo Dondi, Yuri Pirola:
Variants of constrained longest common subsequence. Inf. Process. Lett. 110(20): 877-881 (2010) - Gianluca Della Vedova, Riccardo Dondi, Tao Jiang, Giulio Pavesi, Yuri Pirola, Lusheng Wang:
Beyond evolutionary trees. Nat. Comput. 9(2): 421-435 (2010) - Paola Bonizzoni, Gianluca Della Vedova, Riccardo Dondi, Yuri Pirola, Romeo Rizzi:
Pure Parsimony Xor Haplotyping. IEEE ACM Trans. Comput. Biol. Bioinform. 7(4): 598-610 (2010) - Paola Bonizzoni, Gianluca Della Vedova, Riccardo Dondi, Yuri Pirola:
Parameterized Complexity of k-Anonymity: Hardness and Tractability. IWOCA 2010: 242-255 - Yuri Pirola, Paola Bonizzoni, Tao Jiang:
Haplotype Inference on Pedigrees with Recombinations and Mutations. WABI 2010: 148-161 - Paola Bonizzoni, Gianluca Della Vedova, Riccardo Dondi, Yuri Pirola, Romeo Rizzi:
Pure Parsimony Xor Haplotyping. CoRR abs/1001.1210 (2010) - 2009
- Paola Bonizzoni, Giancarlo Mauri, Graziano Pesole, Ernesto Picardi, Yuri Pirola, Raffaella Rizzi:
Detecting Alternative Gene Structures from Spliced ESTs: A Computational Approach. J. Comput. Biol. 16(1): 43-66 (2009) - Paola Bonizzoni, Gianluca Della Vedova, Riccardo Dondi, Yuri Pirola, Romeo Rizzi:
Pure Parsimony Xor Haplotyping. ISBRA 2009: 186-197 - Paola Bonizzoni, Gianluca Della Vedova, Riccardo Dondi, Yuri Pirola, Raffaella Rizzi:
Minimum Factorization Agreement of Spliced ESTs. WABI 2009: 1-12 - Paola Bonizzoni, Gianluca Della Vedova, Riccardo Dondi, Yuri Pirola:
Parameterized Complexity of the k-anonymity Problem. CoRR abs/0910.3148 (2009) - Paola Bonizzoni, Gianluca Della Vedova, Riccardo Dondi, Yuri Pirola:
Variants of Constrained Longest Common Subsequence. CoRR abs/0912.0368 (2009) - 2007
- Leonardo Vanneschi, Marco Tomassini, Philippe Collard, Sébastien Vérel, Yuri Pirola, Giancarlo Mauri:
A Comprehensive View of Fitness Landscapes with Neutrality and Fitness Clouds. EuroGP 2007: 241-250 - 2006
- Leonardo Vanneschi, Yuri Pirola, Philippe Collard:
A quantitative study of neutrality in GP boolean landscapes. GECCO 2006: 895-902