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Publication search results
found 51 matches
- 2023
- Jeffrey A. Brooks, Vineet Tiruvadi, Alice Baird, Panagiotis Tzirakis, Haoqi Li, Chris Gagne, Moses Oh, Alan Cowen:
Emotion Expression Estimates to Measure and Improve Multimodal Social-Affective Interactions. ICMI Companion 2023: 353-358 - Micaela E. Consens, Cameron Dufault, Michael Wainberg, Duncan Forster, Mehran Karimzadeh, Hani Goodarzi, Fabian J. Theis, Alan Moses, Bo Wang:
To Transformers and Beyond: Large Language Models for the Genome. CoRR abs/2311.07621 (2023) - 2022
- Alex X. Lu, Amy X. Lu, Iva Pritisanac, Taraneh Zarin, Julie D. Forman-Kay, Alan M. Moses:
Discovering molecular features of intrinsically disordered regions by using evolution for contrastive learning. PLoS Comput. Biol. 18(6) (2022) - Nirvana Nursimulu, Alan M. Moses, John Parkinson:
Architect: A tool for aiding the reconstruction of high-quality metabolic models through improved enzyme annotation. PLoS Comput. Biol. 18(9): 1010452 (2022) - Sankaran Iyer, Alan Blair, Christopher White, Laughlin Dawes, Daniel Aaron Moses, Arcot Sowmya:
Vertebral Compression Fracture detection using Multiple Instance Learning and Majority Voting. ICPR 2022: 4630-4636 - 2021
- Tianyu Lu, Alex X. Lu, Alan M. Moses:
Random Embeddings and Linear Regression can Predict Protein Function. CoRR abs/2104.14661 (2021) - Edward C. Schrom II, Ann Kinzig, Stephanie Forrest, Andrea L. Graham, Simon A. Levin, Carl T. Bergstrom, Carlos Castillo-Chavez, James P. Collins, Rob J. De Boer, Adam Doupé, Roya Ensafi, Stuart I. Feldman, Bryan T. Grenfell, J. Alex Halderman, Silvie Huijben, Carlo C. Maley, Melanie E. Moses, Alan S. Perelson, Charles Perrings, Joshua B. Plotkin, Jennifer Rexford, Mohit Tiwari:
Challenges in cybersecurity: Lessons from biological defense systems. CoRR abs/2107.10344 (2021) - Stanley Bryan Z. Hua, Alex X. Lu, Alan M. Moses:
CytoImageNet: A large-scale pretraining dataset for bioimage transfer learning. CoRR abs/2111.11646 (2021) - Sankaran Iyer, Alan Blair, Laughlin Dawes, Daniel Aaron Moses, Christopher White, Arcot Sowmya:
Organ localisation using supervised and semi supervised approaches combining reinforcement learning with imitation learning. CoRR abs/2112.03276 (2021) - 2020
- Alan T. Sherman, Erin Lanus, Moses Liskov, Edward Zieglar, Richard Chang, Enis Golaszewski, Ryan Wnuk-Fink, Cyrus J. Bonyadi, Mario Yaksetig, Ian Blumenfeld:
Formal Methods Analysis of the Secure Remote Password Protocol. Logic, Language, and Security 2020: 103-126 - Mohammed Aldawsari, Ehsaneddin Asgari, Mark A. Finlayson:
Story Fragment Stitching: The Case of the Story of Moses. AI4Narratives@IJCAI 2020: 47-54 - Sankaran Iyer, Arcot Sowmya, Alan Blair, Christopher White, Laughlin Dawes, Daniel Aaron Moses:
A Novel Approach to Vertebral Compression Fracture Detection Using Imitation Learning and Patch Based Convolutional Neural Network. ISBI 2020: 726-730 - Alan T. Sherman, Erin Lanus, Moses Liskov, Edward Zieglar, Richard Chang, Enis Golaszewski, Ryan Wnuk-Fink, Cyrus J. Bonyadi, Mario Yaksetig, Ian Blumenfeld:
Formal Methods Analysis of the Secure Remote Password Protocol. CoRR abs/2003.07421 (2020) - Rohit Saha, Abenezer Teklemariam, Ian Shenyen Hsu, Alan M. Moses:
W-Cell-Net: Multi-frame Interpolation of Cellular Microscopy Videos. CoRR abs/2005.06684 (2020) - Amy X. Lu, Alex X. Lu, Alan M. Moses:
Evolution Is All You Need: Phylogenetic Augmentation for Contrastive Learning. CoRR abs/2012.13475 (2020) - 2019
- Alex X. Lu, Taraneh Zarin, Ian Shenyen Hsu, Alan M. Moses:
YeastSpotter: accurate and parameter-free web segmentation for microscopy images of yeast cells. Bioinform. 35(21): 4525-4527 (2019) - Tahmid F. Mehdi, Gurdeep Singh, Jennifer A Mitchell, Alan M. Moses:
Variational infinite heterogeneous mixture model for semi-supervised clustering of heart enhancers. Bioinform. 35(18): 3232-3239 (2019) - Iva Pritisanac, Robert M. Vernon, Alan M. Moses, Julie D. Forman-Kay:
Entropy and Information within Intrinsically Disordered Protein Regions. Entropy 21(7): 662 (2019) - Alex X. Lu, Oren Z. Kraus, Sam Cooper, Alan M. Moses:
Learning unsupervised feature representations for single cell microscopy images with paired cell inpainting. PLoS Comput. Biol. 15(9) (2019) - Alex X. Lu, Amy X. Lu, Wiebke Schormann, Marzyeh Ghassemi, David W. Andrews, Alan M. Moses:
The Cells Out of Sample (COOS) dataset and benchmarks for measuring out-of-sample generalization of image classifiers. NeurIPS 2019: 1852-1860 - Alex X. Lu, Amy X. Lu, Wiebke Schormann, David W. Andrews, Alan M. Moses:
The Cells Out of Sample (COOS) dataset and benchmarks for measuring out-of-sample generalization of image classifiers. CoRR abs/1906.07282 (2019) - 2018
- Muluye E. Liku, Elizabeth-Ann Legere, Alan M. Moses:
NoLogo: a new statistical model highlights the diversity and suggests new classes of Crm1-dependent nuclear export signals. BMC Bioinform. 19(1): 65:1-65:15 (2018) - Bob Strome, Ian Shenyen Hsu, Mitchell Li Cheong Man, Taraneh Zarin, Alex N. Nguyen Ba, Alan M. Moses:
Short linear motifs in intrinsically disordered regions modulate HOG signaling capacity. BMC Syst. Biol. 12(1): 75:1-75:13 (2018) - Daniil Polykovskiy, Alexander Zhebrak, Benjamín Sánchez-Lengeling, Sergey Golovanov, Oktai Tatanov, Stanislav Belyaev, Rauf Kurbanov, Aleksey Artamonov, Vladimir Aladinskiy, Mark Veselov, Artur Kadurin, Sergey I. Nikolenko, Alán Aspuru-Guzik, Alex Zhavoronkov:
Molecular Sets (MOSES): A Benchmarking Platform for Molecular Generation Models. CoRR abs/1811.12823 (2018) - 2015
- Louis-François Handfield, Bob Strome, Yolanda T. Chong, Alan M. Moses:
Local statistics allow quantification of cell-to-cell variability from high-throughput microscope images. Bioinform. 31(6): 940-947 (2015) - Alana Maurushat, Lyria Bennett Moses, David Vaile:
Using 'big' metadata for criminal intelligence: understanding limitations and appropriate safeguards. ICAIL 2015: 196-200 - 2014
- Alex N. Nguyen Ba, Bob Strome, Jun Jie Hua, Jonathan Desmond, Isabelle Gagnon-Arsenault, Eric L. Weiss, Christian R. Landry, Alan M. Moses:
Detecting Functional Divergence after Gene Duplication through Evolutionary Changes in Posttranslational Regulatory Sequences. PLoS Comput. Biol. 10(12) (2014) - 2013
- Louis-François Handfield, Yolanda T. Chong, Jibril Simmons, Brenda J. Andrews, Alan M. Moses:
Unsupervised Clustering of Subcellular Protein Expression Patterns in High-Throughput Microscopy Images Reveals Protein Complexes and Functional Relationships between Proteins. PLoS Comput. Biol. 9(6) (2013) - 2012
- Andy C. W. Lai, Alex N. Nguyen Ba, Alan M. Moses:
Predicting kinase substrates using conservation of local motif density. Bioinform. 28(7): 962-969 (2012) - Amin Zia, Alan M. Moses:
Towards a theoretical understanding of false positives in DNA motif finding. BMC Bioinform. 13: 151 (2012)
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