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- Anthony J. Bonner
University of Toronto, Canada
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Publication search results
found 59 matches
- 2020
- Pierre Miasnikof, Alexander Y. Shestopaloff, Anthony J. Bonner, Yuri A. Lawryshyn, Panos M. Pardalos, Ernesto Estrada:
A density-based statistical analysis of graph clustering algorithm performance. J. Complex Networks 8(3) (2020) - 2019
- Pierre Miasnikof, Alexander Y. Shestopaloff, Anthony J. Bonner, Yuri A. Lawryshyn, Panos M. Pardalos:
A Statistical Density-Based Analysis of Graph Clustering Algorithm Performance. CoRR abs/1906.02366 (2019) - 2018
- Pierre Miasnikof, Alexander Y. Shestopaloff, Anthony J. Bonner, Yuri A. Lawryshyn:
A Statistical Performance Analysis of Graph Clustering Algorithms. WAW 2018: 170-184 - 2014
- Reza Basseda, Michael Kifer, Anthony J. Bonner:
Planning with Transaction Logic. RR 2014: 29-44 - 2012
- Emad A. M. Andrews, Anthony J. Bonner:
Finding MAPs using strongly equivalent high order recurrent symmetric connectionist networks. Cogn. Syst. Res. 14(1): 50-59 (2012) - 2011
- Emad A. M. Andrews, Anthony J. Bonner:
Explaining Genetic Knock-Out Effects Using Cost-Based Abduction. IJCAI 2011: 1635-1640 - 2010
- Martin Renqiang Min, Laurens van der Maaten, Zineng Yuan, Anthony J. Bonner, Zhaolei Zhang:
Deep Supervised t-Distributed Embedding. ICML 2010: 791-798 - 2009
- Jingjing Li, Martin Renqiang Min, Anthony J. Bonner, Zhaolei Zhang:
A Probabilistic Framework to Improve microRNA Target Prediction by Incorporating Proteomics Data. J. Bioinform. Comput. Biol. 7(6): 955-972 (2009) - Renqiang Min, Anthony J. Bonner, Jingjing Li, Zhaolei Zhang:
Learned Random-Walk Kernels and Empirical-Map Kernels for Protein Sequence Classification. J. Comput. Biol. 16(3): 457-474 (2009) - Anthony J. Harmar
, Rebecca A. Hills, Edward M. Rosser, Martin Jones, Oscar Peter Buneman, Donald R. Dunbar
, Stuart D. Greenhill
, Valerie A. Hale, Joanna L. Sharman
, Tom I. Bonner, William A. Catterall, Anthony P. Davenport
, Philippe Delagrange, Colin T. Dollery, Steven M. Foord, George A. Gutman, Vincent Laudet, Richard R. Neubig
, Eliot H. Ohlstein, Richard W. Olsen, John A. Peters, Jean-Philippe Pin
, Robert R. Ruffolo, David B. Searls, Mathew W. Wright
, Michael Spedding
:
IUPHAR-DB: the IUPHAR database of G protein-coupled receptors and ion channels. Nucleic Acids Res. 37(Database-Issue): 680-685 (2009) - Martin Renqiang Min, David A. Stanley, Zineng Yuan, Anthony J. Bonner, Zhaolei Zhang:
A Deep Non-linear Feature Mapping for Large-Margin kNN Classification. ICDM 2009: 357-366 - Emad A. M. Andrews, Anthony J. Bonner:
Finding MAPs Using High Order Recurrent Networks. ICONIP (1) 2009: 100-109 - Martin Renqiang Min, Rui Kuang, Anthony J. Bonner, Zhaolei Zhang:
Learning Random-Walk Kernels for Protein Remote Homology Identification and Motif Discovery. SDM 2009: 133-144 - Martin Renqiang Min, David A. Stanley, Zineng Yuan, Anthony J. Bonner, Zhaolei Zhang:
Large-Margin kNN Classification Using a Deep Encoder Network. CoRR abs/0906.1814 (2009) - 2008
- Emad A. M. Andrews, Quaid Morris
, Anthony J. Bonner:
Neural networks approaches for discovering the learnable correlation between gene function and gene expression in mouse. Neurocomputing 71(16-18): 3168-3175 (2008) - 2007
- Hui Lan, Rachel Carson, Nicholas J. Provart, Anthony J. Bonner:
Combining classifiers to predict gene function in Arabidopsis thaliana using large-scale gene expression measurements. BMC Bioinform. 8 (2007) - Martin Renqiang Min, Anthony J. Bonner, Zhaolei Zhang:
Modifying kernels using label information improves SVM classification performance. ICMLA 2007: 13-18 - 2006
- Emad A. M. Andrews Shenouda, Quaid Morris, Anthony J. Bonner:
Connectionist Approaches for Predicting Mouse Gene Function from Gene Expression. ICONIP (1) 2006: 280-289 - Anthony J. Bonner, Han Liu:
Towards the Prediction of Protein Abundance from Tandem Mass Spectrometry Data. SDM 2006: 599-603 - 2004
- Anthony J. Bonner, Han Liu:
Comparison of discrimination methods for peptide classification in tandem mass spectrometry. CIBCB 2004: 160-167 - Miles Trochesset, Anthony J. Bonner:
Clustering Labeled Data and Cross-Validation for Classification with Few Positives in Yeast. BIOKDD 2004: 48-55 - 2001
- Eric Harley, Anthony J. Bonner, Nathan Goodman:
Uniform integration of genome mapping data using intersection graphs. Bioinform. 17(6): 487-494 (2001) - Giansalvatore Mecca, Anthony J. Bonner:
Query Languages for Sequence Databases: Termination and Complexity. IEEE Trans. Knowl. Data Eng. 13(3): 519-525 (2001) - 2000
- Anthony J. Bonner, Giansalvatore Mecca:
Querying Sequence Databases with Transducers. Acta Informatica 36(7): 511-544 (2000) - 1999
- Eric Harley, Anthony J. Bonner, Nathan Goodman:
Revealing hidden interval graph structure in STS-content data. Bioinform. 15(4): 278-285 (1999) - Anthony J. Bonner:
Workflow, Transactions, and Datalog. PODS 1999: 294-305 - 1998
- Anthony J. Bonner, Giansalvatore Mecca:
Sequences, Datalog, and Transducers. J. Comput. Syst. Sci. 57(3): 234-259 (1998) - Anthony J. Bonner, Michael Kifer:
A Logic for Programming Database Transactions. Logics for Databases and Information Systems 1998: 117-166 - Anthony J. Bonner, Michael Kifer:
The State of Change: A Survey. Transactions and Change in Logic Databases 1998: 1-36 - Anthony J. Bonner, Michael Kifer:
Results on Reasoning about Updates in Transaction Logic. Transactions and Change in Logic Databases 1998: 166-196
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