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Author search results
Exact matches
- Eric Tannier
University of Lyon, LBBE, France
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Publication search results
found 77 matches
- 2022
- Simon Penel
, Hugo Menet, Théo Tricou
, Vincent Daubin, Eric Tannier:
Thirdkind: displaying phylogenetic encounters beyond 2-level reconciliation. Bioinform. 38(8): 2350-2352 (2022) - Hugo Menet, Vincent Daubin
, Eric Tannier:
Phylogenetic reconciliation. PLoS Comput. Biol. 18(11): 1010621 (2022) - 2020
- Nicolas Comte, Benoit Morel, Damir Hasic, Laurent Guéguen, Bastien Boussau, Vincent Daubin, Simon Penel, Céline Scornavacca, Manolo Gouy, Alexandros Stamatakis, Eric Tannier, David P. Parsons
:
Treerecs: an integrated phylogenetic tool, from sequences to reconciliations. Bioinform. 36(18): 4822-4824 (2020) - Adrián A. Davín, Théo Tricou
, Eric Tannier, Damien M. de Vienne, Gergely J. Szöllosi
:
Zombi: a phylogenetic simulator of trees, genomes and sequences that accounts for dead linages. Bioinform. 36(4): 1286-1288 (2020) - 2019
- Damir Hasic
, Eric Tannier:
Gene tree reconciliation including transfers with replacement is NP-hard and FPT. J. Comb. Optim. 38(2): 502-544 (2019) - Xavier Tannier
, Nicolas Paris, Hugo Cisneros
, Christel Daniel, Matthieu Doutreligne, Catherine Duclos, Nicolas Griffon, Claire Hassen-Khodja, Ivan Lerner, Adrien Parrot, Éric Sadou, Cyril Saussol, Pascal Vaillant:
Hybrid Approaches for our Participation to the n2c2 Challenge on Cohort Selection for Clinical Trials. CoRR abs/1903.07879 (2019) - 2018
- Wandrille Duchemin
, Guillaume Gence, Anne-Muriel Arigon Chifolleau, Lars Arvestad
, Mukul S. Bansal, Vincent Berry
, Bastien Boussau, François Chevenet
, Nicolas Comte, Adrián A. Davín, Christophe Dessimoz
, David Dylus, Damir Hasic, Diego Mallo, Rémi Planel, David Posada
, Céline Scornavacca, Gergely J. Szöllosi
, Louxin Zhang, Eric Tannier, Vincent Daubin:
RecPhyloXML: a format for reconciled gene trees. Bioinform. 34(21): 3646-3652 (2018) - Yoann Anselmetti, Wandrille Duchemin, Eric Tannier, Cédric Chauve, Sèverine Bérard:
Phylogenetic signal from rearrangements in 18 Anopheles species by joint scaffolding extant and ancestral genomes. BMC Genom. 19(S2) (2018) - 2017
- Guillaume Fertin
, Géraldine Jean, Eric Tannier:
Algorithms for computing the double cut and join distance on both gene order and intergenic sizes. Algorithms Mol. Biol. 12(1): 16:1-16:11 (2017) - Edwin Jacox, Mathias Weller, Eric Tannier, Céline Scornavacca:
Resolution and reconciliation of non-binary gene trees with transfers, duplications and losses. Bioinform. 33(7): 980-987 (2017) - Damir Hasic, Eric Tannier:
Gene tree species tree reconciliation with gene conversion. CoRR abs/1703.08950 (2017) - Damir Hasic, Eric Tannier:
Gene tree reconciliation including transfers with replacement is hard and FPT. CoRR abs/1709.04459 (2017) - 2016
- Laurent Bulteau
, Guillaume Fertin
, Eric Tannier:
Genome rearrangements with indels in intergenes restrict the scenario space. BMC Bioinform. 17(S-14): 225-231 (2016) - Patrice Bellot
, Véronique Moriceau, Josiane Mothe, Eric SanJuan, Xavier Tannier
:
INEX Tweet Contextualization task: Evaluation, results and lesson learned. Inf. Process. Manag. 52(5): 801-819 (2016) - Priscila Biller, Carole Knibbe, Guillaume Beslon, Eric Tannier:
Comparative Genomics on Artificial Life. CiE 2016: 35-44 - Guillaume Fertin
, Géraldine Jean, Eric Tannier:
Genome Rearrangements on Both Gene Order and Intergenic Regions. WABI 2016: 162-173 - Eric Tannier:
Sorting Signed Permutations by Reversal (Reversal Sequence). Encyclopedia of Algorithms 2016: 2028-2032 - 2015
- Priscila Biller, Laurent Guéguen, Eric Tannier:
Moments of genome evolution by Double Cut-and-Join. BMC Bioinform. 16(S14): S7 (2015) - Magali Semeria, Eric Tannier, Laurent Guéguen:
Probabilistic modeling of the evolution of gene synteny within reconciled phylogenies. BMC Bioinform. 16(S14): S5 (2015) - Patrice Bellot
, Véronique Moriceau, Josiane Mothe, Eric SanJuan, Xavier Tannier:
Mesures d'informativité et de lisibilité pour un cadre d'évaluation de la contextualisation de tweets. Document Numérique 18(1): 55-73 (2015) - Jean-Guillaume Dumas, Jean-Louis Roch, Eric Tannier, Sébastien Varrette:
Foundations of Coding - Compression, Encryption, Error Correction. Wiley 2015, ISBN 978-1-118-88144-6, pp. I-XVIII, 1-355 - 2014
- István Miklós, Sándor Z. Kiss, Eric Tannier:
Counting and sampling SCJ small parsimony solutions. Theor. Comput. Sci. 552: 83-98 (2014) - Patrice Bellot
, Toine Bogers, Shlomo Geva
, Mark M. Hall
, Hugo C. Huurdeman
, Jaap Kamps
, Gabriella Kazai, Marijn Koolen
, Véronique Moriceau, Josiane Mothe, Michael Preminger, Eric SanJuan, Ralf Schenkel
, Mette Skov
, Xavier Tannier, David Walsh
:
Overview of INEX 2014. CLEF 2014: 212-228 - Patrice Bellot, Véronique Moriceau, Josiane Mothe, Eric SanJuan, Xavier Tannier:
Overview of INEX Tweet Contextualization 2014 track. CLEF (Working Notes) 2014: 494-500 - 2013
- Ashok Rajaraman, Eric Tannier, Cédric Chauve
:
FPSAC: fast phylogenetic scaffolding of ancient contigs. Bioinform. 29(23): 2987-2994 (2013) - Manuel Lafond, Magali Semeria, Krister M. Swenson, Eric Tannier, Nadia El-Mabrouk:
Gene tree correction guided by orthology. BMC Bioinform. 14(S-15): S5 (2013) - Murray Patterson, Gergely J. Szöllosi
, Vincent Daubin
, Eric Tannier:
Lateral gene transfer, rearrangement, reconciliation. BMC Bioinform. 14(S-15): S4 (2013) - Patrice Bellot
, Antoine Doucet, Shlomo Geva, Sairam Gurajada, Jaap Kamps, Gabriella Kazai, Marijn Koolen, Arunav Mishra, Véronique Moriceau, Josiane Mothe, Michael Preminger, Eric SanJuan, Ralf Schenkel, Xavier Tannier
, Martin Theobald
, Matthew Trappett, Andrew Trotman, Mark Sanderson, Falk Scholer
, Qiuyue Wang:
Report on INEX 2013. SIGIR Forum 47(2): 21-32 (2013) - Patrice Bellot
, Antoine Doucet
, Shlomo Geva
, Sairam Gurajada, Jaap Kamps
, Gabriella Kazai, Marijn Koolen
, Arunav Mishra, Véronique Moriceau, Josiane Mothe, Michael Preminger, Eric SanJuan, Ralf Schenkel
, Xavier Tannier, Martin Theobald, Matthew Trappett, Qiuyue Wang:
Overview of INEX 2013. CLEF 2013: 269-281 - Patrice Bellot, Véronique Moriceau, Josiane Mothe, Eric SanJuan, Xavier Tannier:
Overview of INEX Tweet Contextualization 2013 Track. CLEF (Working Notes) 2013
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