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Publication search results
found 24 matches
- 2023
- Robert D. Olson, Rida Assaf, Thomas S. Brettin, Neal Conrad, Clark Cucinell, James J. Davis, Donald M. Dempsey, Allan Dickerman, Emily M. Dietrich, Ronald W. Kenyon, Mehmet Kuscuoglu, Elliot J. Lefkowitz, Jian Lu, Dustin Machi, Catherine Macken, Chunhong Mao, Anna Maria Niewiadomska, Marcus Nguyen, Gary J. Olsen, Jamie C. Overbeek, Bruce D. Parrello, Victoria Parrello, Jacob s Porter, Gordon D. Pusch, Maulik Shukla, Indresh Singh, Lucy Stewart, Gene Tan, Chris Thomas, Margo VanOeffelen, Veronika Vonstein, Zachary S. Wallace, Andrew S. Warren, Alice R. Wattam, Fangfang Xia, Hyun Seung Yoo, Yun Zhang, Christian M. Zmasek, Richard H. Scheuermann, Rick L. Stevens:
Introducing the Bacterial and Viral Bioinformatics Resource Center (BV-BRC): a resource combining PATRIC, IRD and ViPR. Nucleic Acids Res. 51(D1): 678-689 (2023) - J. Weston Hughes, James E. Tooley, Jessica Torres Soto, Anna Ostropolets, Tim Poterucha, Matthew Christensen, Neal Yuan, Ben Ehlert, Dhamanpreet Kaur, Guson Kang, Albert J. Rogers, Sanjiv M. Narayan, Pierre Elias, David Ouyang, Euan A. Ashley, James Zou, Marco V. Perez:
A deep learning-based electrocardiogram risk score for long term cardiovascular death and disease. npj Digit. Medicine 6 (2023) - 2022
- James Austin Harris, Ran Chu, Sean M. Couch, Anshu Dubey, Eirik Endeve, Antigoni Georgiadou, Rajeev Jain, Daniel Kasen, M. Paul Laiu, O. E. Bronson Messer, Jared O'Neal, Michael A. Sandoval, Klaus Weide:
Exascale models of stellar explosions: Quintessential multi-physics simulation. Int. J. High Perform. Comput. Appl. 36(1): 59-77 (2022) - Anshu Dubey, Klaus Weide, Jared O'Neal, Akash Dhruv, Sean M. Couch, James Austin Harris, Tom Klosterman, Rajeev Jain, Johann Rudi, Bronson Messer, Michael Pajkos, Jared Carlson, Ran Chu, Mohamed Wahib, Saurabh Chawdhary, Paul M. Ricker, Dongwook Lee, Katie Antypas, Katherine M. Riley, Christopher S. Daley, Murali K. Ganapathy, Francis X. Timmes, Dean M. Townsley, Marcos Vanella, John Bachan, Paul M. Rich, Shravan Kumar, Eirik Endeve, W. Raphael Hix, Anthony Mezzacappa, Thomas Papatheodore:
Flash-X: A multiphysics simulation software instrument. SoftwareX 19: 101168 (2022) - David Ouyang, John Theurer, Nathan R. Stein, J. Weston Hughes, Pierre Elias, Bryan He, Neal Yuan, Grant Duffy, Roopinder K. Sandhu, Joseph Ebinger, Patrick Botting, Melvin Jujjavarapu, Brian Claggett, James E. Tooley, Tim Poterucha, Jonathan H. Chen, Michael Nurok, Marco V. Perez, Adler J. Perotte, James Y. Zou, Nancy R. Cook, Sumeet S. Chugh, Susan Cheng, Christine M. Albert:
Electrocardiographic Deep Learning for Predicting Post-Procedural Mortality. CoRR abs/2205.03242 (2022) - Anshu Dubey, Klaus Weide, Jared O'Neal, Akash Dhruv, Sean M. Couch, James Austin Harris, Tom Klosterman, Rajeev Jain, Johann Rudi, Bronson Messer, Michael Pajkos, Jared Carlson, Ran Chu, Mohamed Wahib, Saurabh Chawdhary, Paul M. Ricker, Dongwook Lee, Katie Antypas, Katherine M. Riley, Christopher S. Daley, Murali K. Ganapathy, Francis X. Timmes, Dean M. Townsley, Marcos Vanella, John Bachan, Paul Rich, Shravan Kumar, Eirik Endeve, W. Raphael Hix, Anthony Mezzacappa, Thomas Papatheodore:
Flash-X, a multiphysics simulation software instrument. CoRR abs/2208.11630 (2022) - 2021
- Harsh Bhatia, Timothy S. Carpenter, Helgi I. Ingólfsson, Gautham Dharuman, Piyush Karande, Shusen Liu, Tomas Oppelstrup, Chris Neale, Felice C. Lightstone, Brian Van Essen, James N. Glosli, Peer-Timo Bremer:
Machine-learning-based dynamic-importance sampling for adaptive multiscale simulations. Nat. Mach. Intell. 3(5): 401-409 (2021) - Harsh Bhatia, Francesco Di Natale, Joseph Y. Moon, Xiaohua Zhang, Joseph R. Chavez, Fikret Aydin, Christopher B. Stanley, Tomas Oppelstrup, Chris Neale, Sara Kokkila Schumacher, Dong H. Ahn, Stephen Herbein, Timothy S. Carpenter, Sandrasegaram Gnanakaran, Peer-Timo Bremer, James N. Glosli, Felice C. Lightstone, Helgi I. Ingólfsson:
Generalizable coordination of large multiscale workflows: challenges and learnings at scale. SC 2021: 10 - Grant Duffy, Paul P. Cheng, Neal Yuan, Bryan He, Alan C. Kwan, Matthew J. Shun-Shin, Kevin M. Alexander, Joseph Ebinger, Matthew P. Lungren, Florian Rader, David H. Liang, Ingela Schnittger, Euan A. Ashley, James Y. Zou, Jignesh Patel, Ronald Witteles, Susan Cheng, David Ouyang:
High-Throughput Precision Phenotyping of Left Ventricular Hypertrophy with Cardiovascular Deep Learning. CoRR abs/2106.12511 (2021) - 2020
- James J. Davis, Alice R. Wattam, Ramy K. Aziz, Thomas S. Brettin, Ralph Butler, Rory Butler, Philippe Chlenski, Neal Conrad, Allan Dickerman, Emily M. Dietrich, Joseph L. Gabbard, Svetlana Gerdes, Andrew Guard, Ronald W. Kenyon, Dustin Machi, Chunhong Mao, Daniel E. Murphy-Olson, Marcus Nguyen, Eric K. Nordberg, Gary J. Olsen, Robert Olson, Jamie C. Overbeek, Ross A. Overbeek, Bruce D. Parrello, Gordon D. Pusch, Maulik Shukla, Chris Thomas, Margo VanOeffelen, Veronika Vonstein, Andrew S. Warren, Fangfang Xia, Dawen Xie, Hyun Seung Yoo, Rick Stevens:
The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities. Nucleic Acids Res. 48(Database-Issue): D606-D612 (2020) - Ryan L. Collins, Harrison Brand, Konrad J. Karczewski, Xuefang Zhao, Jessica Alföldi, Laurent C. Francioli, Amit V. Khera, Chelsea Lowther, Laura D. Gauthier, Harold Wang, Nicholas A. Watts, Matthew Solomonson, Alexander Baumann, Ruchi Munshi, Mark Walker, Christopher W. Whelan, Yongqing Huang, Ted Brookings, Ted Sharpe, Matthew R. Stone, Elise Valkanas, Jack Fu, Grace Tiao, Kristen M. Laricchia, Valentín Ruano-Rubio, Christine Stevens, Namrata Gupta, Caroline Cusick, Lauren Margolin, Irina M. Armean, Eric Banks, Louis Bergelson, Kristian Cibulskis, Kristen M. Connolly, Miguel Covarrubias, Beryl B. Cummings, Mark J. Daly, Stacey Donnelly, Yossi Farjoun, Steven Ferriera, Stacey Gabriel, Jeff Gentry, Thibault Jeandet, Diane Kaplan, Christopher Llanwarne, Eric V. Minikel, Benjamin M. Neale, Sam Novod, Anne H. O'Donnell-Luria, Nikelle Petrillo, Timothy Poterba, David Roazen, Andrea Saltzman, Kaitlin E. Samocha, Molly Schleicher, Cotton Seed, José Soto, Kathleen Tibbetts, Charlotte Tolonen, Christopher Vittal, Gordon Wade, Arcturus Wang, Qingbo Wang, James S. Ware, Ben Weisburd, Nicola Whiffin, Carlos A. Aguilar Salinas, Tariq Ahmad, Christine M. Albert, Diego Ardissino, Gil Atzmon, John Barnard, Laurent Beaugerie, Emelia J. Benjamin, Michael Boehnke, Lori L. Bonnycastle, Erwin P. Bottinger, Donald W. Bowden, Matthew J. Bown, John C. Chambers, Juliana C. Chan, Daniel Chasman, Judy Cho, Mina K. Chung, Bruce Cohen, Adolfo Correa, Dana Dabelea, Dawood Darbar, Ravindranath Duggirala, Josée Dupuis, Patrick T. Ellinor, Roberto Elosua, Jeanette Erdmann, Tõnu Esko, Martti Färkkilä, Jose Florez, Andre Franke, Gad Getz, Benjamin Glaser, Stephen J. Glatt, David Goldstein, Clicerio Gonzalez, Leif Groop, Christopher A. Haiman, Craig Hanis, Matthew Harms, Mikko Hiltunen, Matti M. Holi, Christina M. Hultman, Mikko Kallela, Jaakko Kaprio, Sekar Kathiresan, Bong-Jo Kim, Young Jin Kim, George Kirov, Jaspal Kooner, Seppo Koskinen, Harlan M. Krumholz, Subra Kugathasan, Soo Heon Kwak, Markku Laakso, Terho Lehtimäki, Ruth J. F. Loos, Steven A. Lubitz, Ronald C. W. Ma, Daniel G. MacArthur, Jaume Marrugat, Kari M. Mattila, Steven A. McCarroll, Mark I. McCarthy, Dermot McGovern, Ruth McPherson, James B. Meigs, Olle Melander, Andres Metspalu, Peter M. Nilsson, Michael C. O'Donovan, Dost Öngür, Lorena Orozco, Michael J. Owen, Colin N. A. Palmer, Aarno Palotie, Kyong Soo Park, Carlos Pato, Ann E. Pulver, Nazneen Rahman, Anne M. Remes, John D. Rioux, Samuli Ripatti, Dan M. Roden, Danish Saleheen, Veikko Salomaa, Nilesh J. Samani, Jeremiah Scharf, Heribert Schunkert, Moore B. Shoemaker, Pamela Sklar, Hilkka Soininen, Harry Sokol, Tim Spector, Patrick F. Sullivan, Jaana Suvisaari, E. Shyong Tai, Yik Ying Teo, Tuomi Tiinamaija, Ming Tsuang, Dan Turner, Teresa Tusie-Luna, Erkki Vartiainen, Hugh Watkins, Rinse K. Weersma, Maija Wessman, James G. Wilson, Ramnik J. Xavier, Kent D. Taylor, Henry J. Lin, Stephen S. Rich, Wendy S. Post, Yii-Der Ida Chen, Jerome I. Rotter, Chad Nusbaum, Anthony A. Philippakis, Eric S. Lander, Michael E. Talkowski:
A structural variation reference for medical and population genetics. Nat. 581(7809): 444-451 (2020) - Rohit Grover, Tony Acosta, C. AnDyke, Emre Armagan, C. Auth, Sunny Chugh, K. Downes, M. Hattendorf, N. Jack, S. Joshi, R. Kasim, Gerald S. Leatherman, S.-H. Lee, C.-Y. Lin, A. Madhavan, H. Mao, A. Lowrie, G. Martin, G. McPherson, Pinakpani Nayak, Adam Neale, D. Nminibapiel, Benjamin Orr, James Palmer, C. M. Pelto, S. S. Poon, I. Post, Tanmoy Pramanik, Anisur Rahman, Stephen Ramey, Norbert Seifert, K. Sethi, Anthony Schmitz, H. Wu, A. Yeoh:
A Reliability Overview of Intel's 10+ Logic Technology. IRPS 2020: 1-6 - Andrew Rukangu, Anton Franzluebbers, Alexander James Tuttle, Kelsey Mattingly, Catherine O'Neal, Dawn Robinson, Sun Joo Grace Ahn, Kyle Johnsen:
Virtual Family Room: Bridging the Long Distance. VR Workshops 2020: 52-56 - 2019
- Dionysios A. Antonopoulos, Rida Assaf, Ramy Karam Aziz, Thomas S. Brettin, Christopher Bun, Neal Conrad, James J. Davis, Emily M. Dietrich, Terry Disz, Svetlana Gerdes, Ronald W. Kenyon, Dustin Machi, Chunhong Mao, Daniel E. Murphy-Olson, Eric K. Nordberg, Gary J. Olsen, Robert Olson, Ross A. Overbeek, Bruce D. Parrello, Gordon D. Pusch, John Santerre, Maulik Shukla, Rick L. Stevens, Margo VanOeffelen, Veronika Vonstein, Andrew S. Warren, Alice R. Wattam, Fangfang Xia, Hyun Seung Yoo:
PATRIC as a unique resource for studying antimicrobial resistance. Briefings Bioinform. 20(4): 1094-1102 (2019) - Francesco Di Natale, Harsh Bhatia, Timothy S. Carpenter, Chris Neale, Sara Kokkila Schumacher, Tomas Oppelstrup, Liam Stanton, Xiaohua Zhang, Shiv Sundram, Thomas R. W. Scogland, Gautham Dharuman, Michael P. Surh, Yue Yang, Claudia Misale, Lars Schneidenbach, Carlos H. A. Costa, Changhoan Kim, Bruce D'Amora, Sandrasegaram Gnanakaran, Dwight V. Nissley, Frederick H. Streitz, Felice C. Lightstone, Peer-Timo Bremer, James N. Glosli, Helgi I. Ingólfsson:
A massively parallel infrastructure for adaptive multiscale simulations: modeling RAS initiation pathway for cancer. SC 2019: 57:1-57:16 - 2018
- Norman Stone, Neris Nieves-Robbins, James C. Tessier, Thomas A. Neal, David Schmidt, Jacob Aaronson, Henry Ogoe, Keith D. Hofmann, Casey Kangas, Karl J. Stiller, Helga E. Rippen, Lauren Thompson:
Integrating Care Between Two Health Systems: Identifying Active Dual Consumers of DoD and VA Health Services. AMIA 2018 - 2017
- Trevor J. Owens, Ashley E. Sands, Emily Reynolds, James Neal, Stephen Mayeaux:
Libraries Advancing the National Digital Platform. D Lib Mag. 23(5/6) (2017) - Coleman Knabe, Robert J. Griffin, James Burton, Graham Cantor-Cooke, Lakshitha Dantanarayana, Graham Day, Oliver Ebeling-Koning, Eric Hahn, Michael A. Hopkins, Jordan Neal, Jackson Newton, Chris Nogales, Viktor L. Orekhov, John Peterson, Michael Rouleau, John Seminatore, Yoonchang Sung, Jacob Webb, Nikolaus Wittenstein, Jason Ziglar, Alexander Leonessa, Brian Y. Lattimer, Tomonari Furukawa:
Team VALOR's ESCHER: A Novel Electromechanical Biped for the DARPA Robotics Challenge. J. Field Robotics 34(5): 912-939 (2017) - Alice R. Wattam, James J. Davis, Rida Assaf, Sébastien Boisvert, Thomas S. Brettin, Christopher Bun, Neal Conrad, Emily M. Dietrich, Terry Disz, Joseph L. Gabbard, Svetlana Gerdes, Christopher S. Henry, Ronald W. Kenyon, Dustin Machi, Chunhong Mao, Eric K. Nordberg, Gary J. Olsen, Daniel E. Murphy-Olson, Robert Olson, Ross A. Overbeek, Bruce D. Parrello, Gordon D. Pusch, Maulik Shukla, Veronika Vonstein, Andrew S. Warren, Fangfang Xia, Hyun Seung Yoo, Rick L. Stevens:
Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center. Nucleic Acids Res. 45(Database-Issue): D535-D542 (2017) - 2014
- Dean P. Holzworth, Neil I. Huth, Peter G. de Voil, Eric J. Zurcher, Neville I. Herrmann, Greg McLean, Karine Chenu, Erik J. van Oosterom, Valerie O. Snow, Chris Murphy, Andrew D. Moore, Hamish E. Brown, Jeremy P. M. Whish, Shaun Verrall, Justin Fainges, Lindsay W. Bell, Allan S. Peake, Perry L. Poulton, Zvi Hochman, Peter J. Thorburn, Donald S. Gaydon, Neal P. Dalgliesh, Daniel Rodríguez, Howard Cox, Scott C. Chapman, Alastair Doherty, Edmar I. Teixeira, Joanna Sharp, Rogerio Cichota, Iris Vogeler, Frank Y. Li, Enli Wang, Graeme L. Hammer, Michael J. Robertson, John P. Dimes, Anthony M. Whitbread, James Hunt, Harm van Rees, Tim McClelland, Peter S. Carberry, John N. G. Hargreaves, Neil MacLeoda, Cam McDonald, Justin Harsdorf, Sara Wedgwood, Brian A. Keating:
APSIM - Evolution towards a new generation of agricultural systems simulation. Environ. Model. Softw. 62: 327-350 (2014) - 2012
- James A. Hilder, Nick D. L. Owens, Mark James Neal, Peter J. Hickey, Stuart N. Cairns, David P. A. Kilgour, Jonathan Timmis, Andrew M. Tyrrell:
Chemical Detection Using the Receptor Density Algorithm. IEEE Trans. Syst. Man Cybern. Part C 42(6): 1730-1741 (2012) - 2001
- James S. O'Neal, Doris L. Carver:
Analyzing the Impact of Changing Requirements. ICSM 2001: 190- - 1996
- David J. Schlesinger, John W. Snell, Lois E. Mansfield, James R. Brookeman, James M. Ortega, Neal F. Kassell:
Segmentation of volumetric medical imagery using multiple geodesic-based active surfaces. Medical Imaging: Image Processing 1996 - 1995
- John W. Snell, Michael B. Merickel, James M. Ortega, John C. Goble, James R. Brookeman, Neal F. Kassell:
Model-based boundary estimation of complex objects using hierarchical active surface templates. Pattern Recognit. 28(10): 1599-1609 (1995)
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