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Publication search results
found 61 matches
- 2024
- Marc Aubreville, Nikolas Stathonikos, Taryn A. Donovan, Robert Klopfleisch, Jonas Ammeling, Jonathan Ganz, Frauke Wilm, Mitko Veta, Samir Jabari, Markus Eckstein, Jonas Annuscheit, Christian Krumnow, Engin Bozaba, Sercan Çayir, Hongyan Gu, Xiang Anthony Chen, Mostafa Jahanifar, Adam Shephard, Satoshi Kondo, Satoshi Kasai, Sujatha Kotte, VG Saipradeep, Maxime W. Lafarge, Viktor H. Koelzer, Ziyue Wang, Yongbing Zhang, Sen Yang, Xiyue Wang, Katharina Breininger, Christof A. Bertram:
Domain generalization across tumor types, laboratories, and species - Insights from the 2022 edition of the Mitosis Domain Generalization Challenge. Medical Image Anal. 94: 103155 (2024) - Jonas Ammeling, Moritz Hecker, Jonathan Ganz, Taryn A. Donovan, Robert Klopfleisch, Christof A. Bertram, Katharina Breininger, Marc Aubreville:
Automated Mitotic Index Calculation via Deep Learning and Immunohistochemistry. Bildverarbeitung für die Medizin 2024: 123-128 - Marc Aubreville, Frauke Wilm, Nikolas Stathonikos, Katharina Breininger, Taryn A. Donovan, Samir Jabari, Robert Klopfleisch, Mitko Veta, Jonathan Ganz, Jonas Ammeling, Paul J. van Diest, Christof A. Bertram:
Abstract: Comprehensive Multi-domain Dataset for Mitotic Figure Detection. Bildverarbeitung für die Medizin 2024: 136 - Christof A. Bertram, Christian Marzahl, Alexander Bartel, Jason Stayt, Federico Bonsembiante, Janet Beeler-Marfisi, Ann K. Barton, Ginevra Brocca, Maria E. Gelain, Agnes C. Gläsel, Kelly du Preez, Kristina Weiler, Christiane Weissenbacher-Lang, Katharina Breininger, Marc Aubreville, Andreas K. Maier, Robert Klopfleisch, Jenny Hill:
Abstract: Cytologic Scoring of Equine Exercise-induced Pulmonary Hemorrhage - Performance of Human Experts and a Deep Learning. Bildverarbeitung für die Medizin 2024: 10 - Jonathan Ganz, Chloé Puget, Jonas Ammeling, Eda Parlak, Matti Kiupel, Christof A. Bertram, Katharina Breininger, Robert Klopfleisch, Marc Aubreville:
Assessment of Scanner Domain Shifts in Deep Multiple Instance Learning. Bildverarbeitung für die Medizin 2024: 137-142 - Chloé Puget, Jonathan Ganz, Julian Ostermaier, Thomas Konrad, Eda Parlak, Christof Albert Bertram, Matti Kiupel, Katharina Breininger, Marc Aubreville, Robert Klopfleisch:
Deep Learning model predicts the c-Kit-11 mutational status of canine cutaneous mast cell tumors by HE stained histological slides. CoRR abs/2401.06169 (2024) - Jonathan Ganz, Christian Marzahl, Jonas Ammeling, Barbara Richter, Chloé Puget, Daniela Denk, Elena A. Demeter, Flaviu A. Tabaran, Gabriel Wasinger, Karoline Lipnik, Marco Tecilla, Matthew J. Valentine, Michael J. Dark, Niklas Abele, Pompei Bolfa, Ramona Erber, Robert Klopfleisch, Sophie Merz, Taryn A. Donovan, Samir Jabari, Christof A. Bertram, Katharina Breininger, Marc Aubreville:
On the Value of PHH3 for Mitotic Figure Detection on H&E-stained Images. CoRR abs/2406.19899 (2024) - 2023
- Marc Aubreville, Nikolas Stathonikos, Christof A. Bertram, Robert Klopfleisch, Natalie ter Hoeve, Francesco Ciompi, Frauke Wilm, Christian Marzahl, Taryn A. Donovan, Andreas K. Maier, Jack Breen, Nishant Ravikumar, Youjin Chung, Jinah Park, Ramin Nateghi, Fattaneh Pourakpour, Rutger H. J. Fick, Saima Ben Hadj, Mostafa Jahanifar, Adam Shephard, Jakob Dexl, Thomas Wittenberg, Satoshi Kondo, Maxime W. Lafarge, Viktor H. Koelzer, Jingtang Liang, Yubo Wang, Xi Long, Jingxin Liu, Salar Razavi, April Khademi, Sen Yang, Xiyue Wang, Ramona Erber, Andrea Klang, Karoline Lipnik, Pompei Bolfa, Michael J. Dark, Gabriel Wasinger, Mitko Veta, Katharina Breininger:
Mitosis domain generalization in histopathology images - The MIDOG challenge. Medical Image Anal. 84: 102699 (2023) - Marc Aubreville, Nikolas Stathonikos, Christof A. Bertram, Robert Klopfleisch, Natalie ter Hoeve, Francesco Ciompi, Frauke Wilm, Christian Marzahl, Taryn A. Donovan, Andreas K. Maier, Mitko Veta, Katharina Breininger:
Abstract: the MIDOG Challenge 2021 - Mitosis Domain Generalization in Histopathology Images. Bildverarbeitung für die Medizin 2023: 115 - Jonathan Ganz, Karoline Lipnik, Jonas Ammeling, Barbara Richter, Chloé Puget, Eda Parlak, Laura Diehl, Robert Klopfleisch, Taryn A. Donovan, Matti Kiupel, Christof A. Bertram, Katharina Breininger, Marc Aubreville:
Deep Learning-based Automatic Assessment of AgNOR-scores in Histopathology Images. Bildverarbeitung für die Medizin 2023: 226-231 - Ludwig M. Lausser, Christof A. Bertram, Robert Klopfleisch, Marc Aubreville:
Limits of Human Expert Ensembles in Mitosis Multi-expert Ground Truth Generation. Bildverarbeitung für die Medizin 2023: 116-121 - Frauke Wilm, Marco Fragoso, Christof A. Bertram, Nikolas Stathonikos, Mathias Öttl, Jingna Qiu, Robert Klopfleisch, Andreas K. Maier, Katharina Breininger, Marc Aubreville:
Multi-scanner Canine Cutaneous Squamous Cell Carcinoma Histopathology Dataset. Bildverarbeitung für die Medizin 2023: 206-211 - Frauke Wilm, Marco Fragoso, Christian Marzahl, Jingna Qiu, Chloé Puget, Laura Diehl, Christof A. Bertram, Robert Klopfleisch, Andreas K. Maier, Katharina Breininger, Marc Aubreville:
Abstract: Pan-tumor CAnine CuTaneous Cancer Histology (CATCH) Dataset. Bildverarbeitung für die Medizin 2023: 205 - Frauke Wilm, Marco Fragoso, Christof A. Bertram, Nikolas Stathonikos, Mathias Öttl, Jingna Qiu, Robert Klopfleisch, Andreas Maier, Marc Aubreville, Katharina Breininger:
Mind the Gap: Scanner-Induced Domain Shifts Pose Challenges for Representation Learning in Histopathology. ISBI 2023: 1-5 - Frauke Wilm, Marco Fragoso, Christof A. Bertram, Nikolas Stathonikos, Robert Klopfleisch, Andreas Maier, Katharina Breininger, Marc Aubreville:
Multi-Scanner Canine Cutaneous Squamous Cell Carcinoma Histopathology Dataset. Zenodo, 2023 - Frauke Wilm, Christian Ihling, Gabor Mehes, Luigi Terracciano, Chloé Puget, Robert Klopfleisch, Peter J. Schüffler, Marc Aubreville, Andreas Maier, Thomas Mrowiec, Katharina Breininger:
Pan-Tumor T-Lymphocyte Detection Dataset. Zenodo, 2023 - Frauke Wilm, Marco Fragoso, Christof A. Bertram, Nikolas Stathonikos, Mathias Öttl, Jingna Qiu, Robert Klopfleisch, Andreas K. Maier, Katharina Breininger, Marc Aubreville:
Multi-Scanner Canine Cutaneous Squamous Cell Carcinoma Histopathology Dataset. CoRR abs/2301.04423 (2023) - Andreas Haghofer, Eda Parlak, Alexander Bartel, Taryn A. Donovan, Charles-Antoine Assenmacher, Pompei Bolfa, Michael J. Dark, Andrea Fuchs-Baumgartinger, Andrea Klang, Kathrin Jäger, Robert Klopfleisch, Sophie Merz, Barbara Richter, F. Yvonne Schulman, Jonathan Ganz, Josef Scharinger, Marc Aubreville, Stephan M. Winkler, Matti Kiupel, Christof A. Bertram:
Nuclear Morphometry using a Deep Learning-based Algorithm has Prognostic Relevance for Canine Cutaneous Mast Cell Tumors. CoRR abs/2309.15031 (2023) - Marc Aubreville, Nikolas Stathonikos, Taryn A. Donovan, Robert Klopfleisch, Jonathan Ganz, Jonas Ammeling, Frauke Wilm, Mitko Veta, Samir Jabari, Markus Eckstein, Jonas Annuscheit, Christian Krumnow, Engin Bozaba, Sercan Cayir, Hongyan Gu, Xiang 'Anthony' Chen, Mostafa Jahanifar, Adam Shephard, Satoshi Kondo, Satoshi Kasai, Sujatha Kotte, VG Saipradeep, Maxime W. Lafarge, Viktor H. Koelzer, Ziyue Wang, Yongbing Zhang, Sen Yang, Xiyue Wang, Katharina Breininger, Christof A. Bertram:
Domain generalization across tumor types, laboratories, and species - insights from the 2022 edition of the Mitosis Domain Generalization Challenge. CoRR abs/2309.15589 (2023) - 2022
- Sonja Kunzmann, Christian Marzahl, Felix Denzinger, Christof Bertram, Robert Klopfleisch, Katharina Breininger, Vincent Christlein, Andreas K. Maier:
First Steps on Gamification of Lung Fluid Cells Annotations in the Flower Domain. Bildverarbeitung für die Medizin 2022: 223-228 - Frauke Wilm, Marco Fragoso, Christian Marzahl, Jingna Qiu, Christof A. Bertram, Robert Klopfleisch, Andreas K. Maier, Katharina Breininger, Marc Aubreville:
Pan-Tumor CAnine cuTaneous Cancer Histology (CATCH) Dataset. CoRR abs/2201.11446 (2022) - Marc Aubreville, Nikolas Stathonikos, Christof A. Bertram, Robert Klopfleisch, Natalie D. ter Hoeve, Francesco Ciompi, Frauke Wilm, Christian Marzahl, Taryn A. Donovan, Andreas K. Maier, Jack Breen, Nishant Ravikumar, Youjin Chung, Jinah Park, Ramin Nateghi, Fattaneh Pourakpour, Rutger H. J. Fick, Saima Ben Hadj, Mostafa Jahanifar, Nasir M. Rajpoot, Jakob Dexl, Thomas Wittenberg, Satoshi Kondo, Maxime W. Lafarge, Viktor H. Koelzer, Jingtang Liang, Yubo Wang, Xi Long, Jingxin Liu, Salar Razavi, April Khademi, Sen Yang, Xiyue Wang, Mitko Veta, Katharina Breininger:
Mitosis domain generalization in histopathology images - The MIDOG challenge. CoRR abs/2204.03742 (2022) - Frauke Wilm, Marco Fragoso, Christof A. Bertram, Nikolas Stathonikos, Mathias Öttl, Jingna Qiu, Robert Klopfleisch, Andreas K. Maier, Marc Aubreville, Katharina Breininger:
Mind the Gap: Scanner-induced domain shifts pose challenges for representation learning in histopathology. CoRR abs/2211.16141 (2022) - Jonathan Ganz, Karoline Lipnik, Jonas Ammeling, Barbara Richter, Chloé Puget, Eda Parlak, Laura Diehl, Robert Klopfleisch, Taryn A. Donovan, Matti Kiupel, Christof A. Bertram, Katharina Breininger, Marc Aubreville:
Deep Learning-Based Automatic Assessment of AgNOR-scores in Histopathology Images. CoRR abs/2212.07721 (2022) - 2021
- Marc Aubreville, Christof A. Bertram, Taryn A. Donovan, Christian Marzahl, Andreas Maier, Robert Klopfleisch:
Abstract: A Completely Annotated Whole Slide Image Dataset of Canine Breast Cancer to Aid Human Breast Cancer Research. Bildverarbeitung für die Medizin 2021: 198 - Marc Aubreville, Christof A. Bertram, Christian Marzahl, Corinne Gurtner, Martina Dettwiler, Anja Schmidt, Florian Bartenschlager, Sophie Merz, Marco Fragoso, Olivia Kershaw, Robert Klopfleisch, Andreas Maier:
Abstract: Deep Learning Algorithms Out-perform Veterinary Pathologists in Detecting the Mitotically Most Active Tumor Region. Bildverarbeitung für die Medizin 2021: 260 - Christof A. Bertram, Taryn A. Donovan, Marco Tecilla, Florian Bartenschlager, Marco Fragoso, Frauke Wilm, Christian Marzahl, Katharina Breininger, Andreas Maier, Robert Klopfleisch, Marc Aubreville:
Dataset on Bi- and Multi-nucleated Tumor Cells in Canine Cutaneous Mast Cell Tumors. Bildverarbeitung für die Medizin 2021: 134-139 - Christian Marzahl, Marc Aubreville, Christof A. Bertram, Jason Stayt, Anne-Katherine Jasensky, Florian Bartenschlager, Marco Fragoso, Ann K. Barton, Svenja Elsemann, Samir Jabari, Jens Krauth, Prathmesh Madhu, Jörn Voigt, Jenny Hill, Robert Klopfleisch, Andreas Maier:
Abstract: Deep Learning-based Quantification of Pulmonary Hemosiderophages in Cytology Slides. Bildverarbeitung für die Medizin 2021: 48 - Christian Marzahl, Christof A. Bertram, Marc Aubreville, Anne Petrick, Kristina Weiler, Agnes C. Gläsel, Marco Fragoso, Sophie Merz, Florian Bartenschlager, Judith Hoppe, Alina Langenhagen, Anne-Katherine Jasensky, Jörn Voigt, Robert Klopfleisch, Andreas Maier:
Abstract: Are Fast Labeling Methods Reliable? - A Case Study of Computer-aided Expert Annotations on Microscopy Slides. Bildverarbeitung für die Medizin 2021: 296 - Christian Marzahl, Christof A. Bertram, Frauke Wilm, Jörn Voigt, Ann K. Barton, Robert Klopfleisch, Katharina Breininger, Andreas Maier, Marc Aubreville:
Cell Detection for Asthma on Partially Annotated Whole Slide Images - Learning to be EXACT. Bildverarbeitung für die Medizin 2021: 147-152
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