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29th SPIRE 2022: Concepción, Chile
- Diego Arroyuelo
, Barbara Poblete:
String Processing and Information Retrieval - 29th International Symposium, SPIRE 2022, Concepción, Chile, November 8-10, 2022, Proceedings. Lecture Notes in Computer Science 13617, Springer 2022, ISBN 978-3-031-20642-9
String Algorithms
- Panagiotis Charalampopoulos
, Solon P. Pissis
, Jakub Radoszewski
, Wojciech Rytter
, Tomasz Walen
, Wiktor Zuba
:
Subsequence Covers of Words. 3-15 - Golnaz Badkobeh
, Alessandro De Luca
, Gabriele Fici
, Simon J. Puglisi
:
Maximal Closed Substrings. 16-23 - Laurentius Leonard
, Shunsuke Inenaga
, Hideo Bannai
, Takuya Mieno
:
Online Algorithms for Finding Distinct Substrings with Length and Multiple Prefix and Suffix Conditions. 24-37 - Philip Bille
, Inge Li Gørtz
, Tord Stordalen
:
The Complexity of the Co-occurrence Problem. 38-52
String Data Structures
- Amihood Amir, Concettina Guerra, Eitan Kondratovsky, Gad M. Landau, Shoshana Marcus, Dina Sokol
:
Reconstructing Parameterized Strings from Parameterized Suffix and LCP Arrays. 55-69 - Daiki Hashimoto, Diptarama Hendrian
, Dominik Köppl
, Ryo Yoshinaka
, Ayumi Shinohara
:
Computing the Parameterized Burrows-Wheeler Transform Online. 70-85 - Christina Boucher, Dominik Köppl
, Herman Perera, Massimiliano Rossi:
Accessing the Suffix Array via φ -1-Forest. 86-98 - Jannik Olbrich
, Enno Ohlebusch, Thomas Büchler
:
On the Optimisation of the GSACA Suffix Array Construction Algorithm. 99-113
String Compression
- Akiyoshi Kawamoto, Tomohiro I
:
Substring Complexities on Run-Length Compressed Strings. 132-143
Information Retrieval
- Maik Fröbe, Christopher Akiki, Martin Potthast, Matthias Hagen:
How Train-Test Leakage Affects Zero-Shot Retrieval. 147-161
Computational Biology
- Lucas P. Ramos
, Felipe A. Louza
, Guilherme P. Telles
:
Genome Comparison on Succinct Colored de Bruijn Graphs. 165-177 - Guillaume Fertin
, Géraldine Jean
, Anthony Labarre
:
Sorting Genomes by Prefix Double-Cut-and-Joins. 178-190 - Travis Gagie, Sana Kashgouli, Ben Langmead:
KATKA: A KRAKEN-Like Tool with k Given at Query Time. 191-197 - Diego Díaz-Domínguez
, Simon J. Puglisi
, Leena Salmela
:
Computing All-vs-All MEMs in Run-Length-Encoded Collections of HiFi Reads. 198-213
Space-Efficient Data Structures
- Rathish Das, Meng He
, Eitan Kondratovsky, J. Ian Munro, Kaiyu Wu:
Internal Masked Prefix Sums and Its Connection to Fully Internal Measurement Queries. 217-232 - Antonio Boffa
, Paolo Ferragina
, Francesco Tosoni
, Giorgio Vinciguerra
:
Compressed String Dictionaries via Data-Aware Subtrie Compaction. 233-249 - Travis Gagie:
On Representing the Degree Sequences of Sublogarithmic-Degree Wheeler Graphs. 250-256 - Florian Kurpicz
:
Engineering Compact Data Structures for Rank and Select Queries on Bit Vectors. 257-272
Pattern Matching on Strings, Graphs, and Trees
- Pawel Gawrychowski
, Florin Manea
, Stefan Siemer
:
Matching Patterns with Variables Under Edit Distance. 275-289 - Panagiotis Charalampopoulos
, Pawel Gawrychowski
, Shay Mozes
, Oren Weimann
:
On the Hardness of Computing the Edit Distance of Shallow Trees. 290-302 - Parisa Darbari, Daniel Gibney, Sharma V. Thankachan:
Quantum Time Complexity and Algorithms for Pattern Matching on Labeled Graphs. 303-314 - Garance Gourdel, Anne Driemel
, Pierre Peterlongo, Tatiana Starikovskaya:
Pattern Matching Under DTW Distance. 315-330

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