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BibTeX records: Sadaf R. Alam
@article{DBLP:journals/ijhpca/AlamGKMS23, author = {Sadaf R. Alam and Miguel Gila and Mark Klein and Maxime Martinasso and Thomas C. Schulthess}, title = {Versatile software-defined {HPC} and cloud clusters on Alps supercomputer for diverse workflows}, journal = {Int. J. High Perform. Comput. Appl.}, volume = {37}, number = {3-4}, pages = {288--305}, year = {2023}, url = {https://doi.org/10.1177/10943420231167811}, doi = {10.1177/10943420231167811}, timestamp = {Wed, 29 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ijhpca/AlamGKMS23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/cacm/AlamBCHLP22, author = {Sadaf R. Alam and Javier Bartolome and Michele Carpen{\`{e}} and Kalle Happonen and Jacques{-}Charles Lafoucriere and Dirk Pleiter}, title = {Fenix: a Pan-European federation of supercomputing and cloud e-infrastructure services}, journal = {Commun. {ACM}}, volume = {65}, number = {4}, pages = {46--47}, year = {2022}, url = {https://doi.org/10.1145/3511802}, doi = {10.1145/3511802}, timestamp = {Wed, 25 May 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/cacm/AlamBCHLP22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/tpds/AlamMN22, author = {Sadaf R. Alam and Lois Curfman McInnes and Kengo Nakajima}, title = {{IEEE} Special Issue on Innovative R{\&}D Toward the Exascale Era}, journal = {{IEEE} Trans. Parallel Distributed Syst.}, volume = {33}, number = {4}, pages = {736--738}, year = {2022}, url = {https://doi.org/10.1109/TPDS.2021.3109651}, doi = {10.1109/TPDS.2021.3109651}, timestamp = {Wed, 20 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/tpds/AlamMN22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/sc/2022, editor = {Felix Wolf and Sameer Shende and Candace Culhane and Sadaf R. Alam and Heike Jagode}, title = {{SC22:} International Conference for High Performance Computing, Networking, Storage and Analysis, Dallas, TX, USA, November 13-18, 2022}, publisher = {{IEEE}}, year = {2022}, url = {https://doi.org/10.1109/SC41404.2022}, doi = {10.1109/SC41404.2022}, isbn = {978-1-6654-5444-5}, timestamp = {Wed, 24 May 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/sc/2022.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/sc/AlamGKM21, author = {Sadaf R. Alam and Miguel Gila and Mark Klein and Maxime Martinasso}, title = {Multi-tenancy Management and Zero Downtime Upgrades using Cray-HPE Shasta Supercomputers}, booktitle = {2021 {SC} Workshops Supplementary Proceedings, {SC} Workshops Supplementary Proceedings 2021, St. Louis, MO, USA, November 14-19, 2021}, pages = {87--94}, publisher = {{IEEE}}, year = {2021}, url = {https://doi.org/10.1109/SCWS55283.2021.00021}, doi = {10.1109/SCWS55283.2021.00021}, timestamp = {Wed, 29 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/sc/AlamGKM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/sc/AlamBBCCCGGFHHH20, author = {Sadaf R. Alam and Javier Bartolome and Sanzio Bassini and Michele Carpen{\`{e}} and Mirko Cestari and Frederic Combeau and Sergi Girona and Stefano Gorini and Giuseppe Fiameni and Bj{\"{o}}rn Hagemeier and Thorsten Hater and Andreas Herten and Nikoleta Kiapidou and Wouter Klijn and Dorian Krause and Jacques{-}Charles Lafoucriere and Cerlane Leong and Thomas Leibovici and Thomas Lippert and Colin McMurtrie and Pavel Mezentsev and Anne Nahm and Boris Orth and Dirk Pleiter and Thomas C. Schulthess and Benedikt von St. Vieth and Debora Testi and Gilles Wiber}, title = {Archival Data Repository Services to Enable {HPC} and Cloud Workflows in a Federated Research e-Infrastructure}, booktitle = {{IEEE/ACM} International Workshop on Interoperability of Supercomputing and Cloud Technologies, SuperCompCloud@SC 2020, Atlanta, GA, USA, November 11, 2020}, pages = {39--44}, publisher = {{IEEE}}, year = {2020}, url = {https://doi.org/10.1109/SuperCompCloud51944.2020.00012}, doi = {10.1109/SUPERCOMPCLOUD51944.2020.00012}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/sc/AlamBBCCCGGFHHH20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/smc2/AlamKBALWS20, author = {Sadaf R. Alam and Mark Klein and Mauro Bianco and Roberto Aielli and Xavier Lapillonne and Andre Walser and Thomas C. Schulthess}, editor = {Jeffrey Nichols and Becky Verastegui and Arthur Barney Maccabe and Oscar R. Hernandez and Suzanne Parete{-}Koon and Theresa Ahearn}, title = {Software Defined Infrastructure for Operational Numerical Weather Prediction}, booktitle = {Driving Scientific and Engineering Discoveries Through the Convergence of HPC, Big Data and {AI} - 17th Smoky Mountains Computational Sciences and Engineering Conference, {SMC} 2020, Oak Ridge, TN, USA, August 26-28, 2020, Revised Selected Papers}, series = {Communications in Computer and Information Science}, volume = {1315}, pages = {303--317}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-63393-6\_20}, doi = {10.1007/978-3-030-63393-6\_20}, timestamp = {Wed, 29 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/smc2/AlamKBALWS20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/braincomp/AlamBBCCCGGFHHK19, author = {Sadaf R. Alam and Javier Bartolome and Sanzio Bassini and Michele Carpen{\`{e}} and Mirko Cestari and Frederic Combeau and Sergi Girona and Stefano Gorini and Giuseppe Fiameni and Bj{\"{o}}rn Hagemeier and Andreas Herten and Nikoleta Kiapidou and Wouter Klijn and Dorian Krause and Jacques{-}Charles Lafoucriere and Cerlane Leong and Thomas Leibovici and Thomas Lippert and Colin McMurtrie and Pavel Mezentsev and Anne Nahm and Boris Orth and Dirk Pleiter and Thomas C. Schulthess and Benedikt von St. Vieth and Debora Testi and Gilles Wiber}, editor = {Katrin Amunts and Lucio Grandinetti and Thomas Lippert and Nicolai Petkov}, title = {Fenix: Distributed e-Infrastructure Services for {EBRAINS}}, booktitle = {Brain-Inspired Computing - 4th International Workshop, BrainComp 2019, Cetraro, Italy, July 15-19, 2019, Revised Selected Papers}, series = {Lecture Notes in Computer Science}, volume = {12339}, pages = {81--89}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-82427-3\_6}, doi = {10.1007/978-3-030-82427-3\_6}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/braincomp/AlamBBCCCGGFHHK19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/sc/KleinMLA19, author = {Mark Klein and Maxime Martinasso and Siew Hoon Leong and Sadaf R. Alam}, editor = {Guido Juckeland and Sunita Chandrasekaran}, title = {Interactive Supercomputing for Experimental Data-Driven Workflows}, booktitle = {Tools and Techniques for High Performance Computing - Selected Workshops, HUST, {SE-HER} and WIHPC, Held in Conjunction with {SC} 2019, Denver, CO, USA, November 17-18, 2019, Revised Selected Papers}, series = {Communications in Computer and Information Science}, volume = {1190}, pages = {164--178}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-44728-1\_10}, doi = {10.1007/978-3-030-44728-1\_10}, timestamp = {Wed, 29 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/sc/KleinMLA19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/supercomputer/2019w, editor = {Mich{\`{e}}le Weiland and Guido Juckeland and Sadaf R. Alam and Heike Jagode}, title = {High Performance Computing - {ISC} High Performance 2019 International Workshops, Frankfurt, Germany, June 16-20, 2019, Revised Selected Papers}, series = {Lecture Notes in Computer Science}, volume = {11887}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-34356-9}, doi = {10.1007/978-3-030-34356-9}, isbn = {978-3-030-34355-2}, timestamp = {Wed, 11 Dec 2019 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/supercomputer/2019w.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/sc/MartinassoGBAMS18, author = {Maxime Martinasso and Miguel Gila and Mauro Bianco and Sadaf R. Alam and Colin McMurtrie and Thomas C. Schulthess}, title = {RM-replay: a high-fidelity tuning, optimization and exploration tool for resource management}, booktitle = {Proceedings of the International Conference for High Performance Computing, Networking, Storage, and Analysis, {SC} 2018, Dallas, TX, USA, November 11-16, 2018}, pages = {25:1--25:13}, publisher = {{IEEE} / {ACM}}, year = {2018}, url = {http://dl.acm.org/citation.cfm?id=3291690}, timestamp = {Mon, 12 Nov 2018 09:05:15 +0100}, biburl = {https://dblp.org/rec/conf/sc/MartinassoGBAMS18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/supercomputer/2018w, editor = {Rio Yokota and Mich{\`{e}}le Weiland and John Shalf and Sadaf R. Alam}, title = {High Performance Computing - {ISC} High Performance 2018 International Workshops, Frankfurt/Main, Germany, June 28, 2018, Revised Selected Papers}, series = {Lecture Notes in Computer Science}, volume = {11203}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-030-02465-9}, doi = {10.1007/978-3-030-02465-9}, isbn = {978-3-030-02464-2}, timestamp = {Tue, 14 May 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/supercomputer/2018w.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/middleware/Alam17, author = {Sadaf R. Alam}, editor = {Parisa Jalili Marandi and Alessandro Margara}, title = {Abstractions for supercomputing platforms to facilitate consolidation of services: poster}, booktitle = {Proceedings of the 18th {ACM/IFIP/USENIX} Middleware Conference: Posters and Demos, Las Vegas, NV, USA, December 11 - 15, 2017}, pages = {9--10}, publisher = {{ACM}}, year = {2017}, url = {https://doi.org/10.1145/3155016.3155026}, doi = {10.1145/3155016.3155026}, timestamp = {Tue, 06 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/middleware/Alam17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/sc/MartinassoKASH16, author = {Maxime Martinasso and Grzegorz Kwasniewski and Sadaf R. Alam and Thomas C. Schulthess and Torsten Hoefler}, editor = {John West and Cherri M. Pancake}, title = {A PCIe congestion-aware performance model for densely populated accelerator servers}, booktitle = {Proceedings of the International Conference for High Performance Computing, Networking, Storage and Analysis, {SC} 2016, Salt Lake City, UT, USA, November 13-18, 2016}, pages = {739--749}, publisher = {{IEEE} Computer Society}, year = {2016}, url = {https://doi.org/10.1109/SC.2016.62}, doi = {10.1109/SC.2016.62}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/sc/MartinassoKASH16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/concurrency/AgarwalHPRAC13, author = {Pratul K. Agarwal and Scott S. Hampton and Jeffrey D. Poznanovic and Arvind Ramanathan and Sadaf R. Alam and Paul S. Crozier}, title = {Performance modeling of microsecond scale biological molecular dynamics simulations on heterogeneous architectures}, journal = {Concurr. Comput. Pract. Exp.}, volume = {25}, number = {10}, pages = {1356--1375}, year = {2013}, url = {https://doi.org/10.1002/cpe.2943}, doi = {10.1002/CPE.2943}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/concurrency/AgarwalHPRAC13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ibmrd/AlamBBCFHKLMMPSSW13, author = {Sadaf R. Alam and Constantine Bekas and Hans Boettiger and Alessandro Curioni and Gilles Fourestey and Willi Homberg and Michael Knobloch and Teodoro Laino and Thilo Maurer and Bernd Mohr and Dirk Pleiter and Arwed Schiller and Thomas C. Schulthess and Val{\'{e}}ry Weber}, title = {Early experiences with scientific applications on the {IBM} Blue Gene/Q supercomputer}, journal = {{IBM} J. Res. Dev.}, volume = {57}, number = {1/2}, pages = {14}, year = {2013}, url = {https://doi.org/10.1147/JRD.2012.2234331}, doi = {10.1147/JRD.2012.2234331}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ibmrd/AlamBBCFHKLMMPSSW13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ccgrid/PenaA13, author = {Antonio J. Pe{\~{n}}a and Sadaf R. Alam}, title = {Evaluation of Inter- and Intra-node Data Transfer Efficiencies between {GPU} Devices and their Impact on Scalable Applications}, booktitle = {13th {IEEE/ACM} International Symposium on Cluster, Cloud, and Grid Computing, CCGrid 2013, Delft, Netherlands, May 13-16, 2013}, pages = {144--151}, publisher = {{IEEE} Computer Society}, year = {2013}, url = {https://doi.org/10.1109/CCGrid.2013.15}, doi = {10.1109/CCGRID.2013.15}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/ccgrid/PenaA13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/sigmetrics/TineoAS12, author = {Adrian Tineo and Sadaf R. Alam and Thomas C. Schulthess}, title = {Towards autotuning by alternating communication methods}, journal = {{SIGMETRICS} Perform. Evaluation Rev.}, volume = {40}, number = {2}, pages = {80--85}, year = {2012}, url = {https://doi.org/10.1145/2381056.2381075}, doi = {10.1145/2381056.2381075}, timestamp = {Sat, 25 Apr 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/sigmetrics/TineoAS12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/iwomp/AlamFVGGD12, author = {Sadaf R. Alam and Gilles Fourestey and Brice Videau and Luigi Genovese and Stefan Goedecker and Nazim Dugan}, editor = {Barbara M. Chapman and Federico Massaioli and Matthias S. M{\"{u}}ller and Marco Rorro}, title = {Overlapping Computations with Communications and {I/O} Explicitly Using OpenMP Based Heterogeneous Threading Models}, booktitle = {OpenMP in a Heterogeneous World - 8th International Workshop on OpenMP, {IWOMP} 2012, Rome, Italy, June 11-13, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7312}, pages = {267--270}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30961-8\_23}, doi = {10.1007/978-3-642-30961-8\_23}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/iwomp/AlamFVGGD12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cf/NallamuthuSHAA10, author = {Ananth Nallamuthu and Melissa C. Smith and Scott S. Hampton and Pratul K. Agarwal and Sadaf R. Alam}, editor = {Nancy M. Amato and Hubertus Franke and Paul H. J. Kelly}, title = {Energy efficient biomolecular simulations with FPGA-based reconfigurable computing}, booktitle = {Proceedings of the 7th Conference on Computing Frontiers, 2010, Bertinoro, Italy, May 17-19, 2010}, pages = {83--84}, publisher = {{ACM}}, year = {2010}, url = {https://doi.org/10.1145/1787275.1787294}, doi = {10.1145/1787275.1787294}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/cf/NallamuthuSHAA10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ieeehpcs/HamptonAAC10, author = {Scott S. Hampton and Pratul K. Agarwal and Sadaf R. Alam and Paul S. Crozier}, editor = {Waleed W. Smari and John P. McIntire}, title = {Towards microsecond biological molecular dynamics simulations on hybrid processors}, booktitle = {Proceedings of the 2010 International Conference on High Performance Computing {\&} Simulation, {HPCS} 2010, June 28 - July 2, 2010, Caen, France}, pages = {98--107}, publisher = {{IEEE}}, year = {2010}, url = {https://doi.org/10.1109/HPCS.2010.5547149}, doi = {10.1109/HPCS.2010.5547149}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/ieeehpcs/HamptonAAC10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/sc/HamptonACA10, author = {Scott S. Hampton and Sadaf R. Alam and Paul S. Crozier and Pratul K. Agarwal}, title = {Optimal Utilization of Heterogeneous Resources for Biomolecular Simulations}, booktitle = {Conference on High Performance Computing Networking, Storage and Analysis, {SC} 2010, New Orleans, LA, USA, November 13-19, 2010}, pages = {1--11}, publisher = {{IEEE}}, year = {2010}, url = {https://doi.org/10.1109/SC.2010.37}, doi = {10.1109/SC.2010.37}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/sc/HamptonACA10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/europar/AlamBJKPS09, author = {Sadaf R. Alam and Richard F. Barrett and Heike Jagode and Jeffery A. Kuehn and Stephen W. Poole and Ramanan Sankaran}, editor = {Henk J. Sips and Dick H. J. Epema and Hai{-}Xiang Lin}, title = {Impact of Quad-Core Cray {XT4} System and Software Stack on Scientific Computation}, booktitle = {Euro-Par 2009 Parallel Processing, 15th International Euro-Par Conference, Delft, The Netherlands, August 25-28, 2009. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5704}, pages = {334--344}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-03869-3\_33}, doi = {10.1007/978-3-642-03869-3\_33}, timestamp = {Tue, 29 Dec 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/europar/AlamBJKPS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/eurosys/TikotekarOAVNES09, author = {Anand Tikotekar and Hong Ong and Sadaf R. Alam and Geoffroy Vall{\'{e}}e and Thomas J. Naughton and Christian Engelmann and Stephen L. Scott}, editor = {Stephen L. Scott and Geoffroy Vall{\'{e}}e}, title = {Performance comparison of two virtual machine scenarios using an {HPC} application: a case study using molecular dynamics simulations}, booktitle = {Proceedings of the 3rd {ACM} Workshop on System-level Virtualization for High Performance Computing, HPCVirt '09, Nuremburg, Germany, March 31, 2009}, pages = {33--40}, publisher = {{ACM}}, year = {2009}, url = {https://doi.org/10.1145/1519138.1519143}, doi = {10.1145/1519138.1519143}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/eurosys/TikotekarOAVNES09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/iccS/JagodeDAVSM09, author = {Heike Jagode and Jack J. Dongarra and Sadaf R. Alam and Jeffrey S. Vetter and Wyatt Spear and Allen D. Malony}, editor = {Gabrielle Allen and Jaroslaw Nabrzyski and Edward Seidel and G. Dick van Albada and Jack J. Dongarra and Peter M. A. Sloot}, title = {A Holistic Approach for Performance Measurement and Analysis for Petascale Applications}, booktitle = {Computational Science - {ICCS} 2009, 9th International Conference, Baton Rouge, LA, USA, May 25-27, 2009, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {5545}, pages = {686--695}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01973-9\_77}, doi = {10.1007/978-3-642-01973-9\_77}, timestamp = {Tue, 29 Dec 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/iccS/JagodeDAVSM09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/icpp/AlamBKP09, author = {Sadaf R. Alam and Richard F. Barrett and Jeffery A. Kuehn and Steve Poole}, title = {Performance Characterization of a Hierarchical {MPI} Implementation on Large-scale Distributed-memory Platforms}, booktitle = {{ICPP} 2009, International Conference on Parallel Processing, Vienna, Austria, 22-25 September 2009}, pages = {132--139}, publisher = {{IEEE} Computer Society}, year = {2009}, url = {https://doi.org/10.1109/ICPP.2009.51}, doi = {10.1109/ICPP.2009.51}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/icpp/AlamBKP09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ipps/AlamBKP09, author = {Sadaf R. Alam and Richard F. Barrett and Jeffery A. Kuehn and Stephen W. Poole}, title = {Performance analysis and projections for Petascale applications on Cray {XT} series systems}, booktitle = {23rd {IEEE} International Symposium on Parallel and Distributed Processing, {IPDPS} 2009, Rome, Italy, May 23-29, 2009}, pages = {1--8}, publisher = {{IEEE}}, year = {2009}, url = {https://doi.org/10.1109/IPDPS.2009.5161097}, doi = {10.1109/IPDPS.2009.5161097}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/ipps/AlamBKP09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/tapia/DeFlumereA09, author = {Ashley M. DeFlumere and Sadaf R. Alam}, editor = {Nina M. Berry}, title = {Exploring multi-core limitations through comparison of contemporary systems}, booktitle = {Proceedings of the Richard Tapia Celebration of Diversity in Computing Conference 2009: Intellect, Initiatives, Insight, and Innovations, Portland, Oregon, USA, April 1-4, 2009}, pages = {75--80}, publisher = {{ACM}}, year = {2009}, url = {https://doi.org/10.1145/1565799.1565817}, doi = {10.1145/1565799.1565817}, timestamp = {Tue, 06 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/tapia/DeFlumereA09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ac/DongarraGHLLLMSVYACCCKMT08, author = {Jack J. Dongarra and Robert B. Graybill and William J. Harrod and Robert F. Lucas and Ewing L. Lusk and Piotr Luszczek and Janice McMahon and Allan Snavely and Jeffrey S. Vetter and Katherine A. Yelick and Sadaf R. Alam and Roy L. Campbell and Laura Carrington and Tzu{-}Yi Chen and Omid Khalili and Jeremy S. Meredith and Mustafa M. Tikir}, title = {DARPA's {HPCS} Program- History, Models, Tools, Languages}, journal = {Adv. Comput.}, volume = {72}, pages = {1--100}, year = {2008}, timestamp = {Thu, 02 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ac/DongarraGHLLLMSVYACCCKMT08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ijhpca/AlamBFKMMRVW08, author = {Sadaf R. Alam and Richard F. Barrett and Mark R. Fahey and Jeffery A. Kuehn and O. E. Bronson Messer and Richard Tran Mills and Philip C. Roth and Jeffrey S. Vetter and Patrick H. Worley}, title = {An Evaluation of the Oak Ridge National Laboratory Cray {XT3}}, journal = {Int. J. High Perform. Comput. Appl.}, volume = {22}, number = {1}, pages = {52--80}, year = {2008}, url = {https://doi.org/10.1177/1094342007085019}, doi = {10.1177/1094342007085019}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ijhpca/AlamBFKMMRVW08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/pc/AlamAV08, author = {Sadaf R. Alam and Pratul K. Agarwal and Jeffrey S. Vetter}, title = {Performance characteristics of biomolecular simulations on high-end systems with multi-core processors}, journal = {Parallel Comput.}, volume = {34}, number = {11}, pages = {640--651}, year = {2008}, url = {https://doi.org/10.1016/j.parco.2008.05.003}, doi = {10.1016/J.PARCO.2008.05.003}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/pc/AlamAV08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/hipc/AlamAHO08, author = {Sadaf R. Alam and Pratul K. Agarwal and Scott S. Hampton and Hong Ong}, editor = {P. Sadayappan and Manish Parashar and Ramamurthy Badrinath and Viktor K. Prasanna}, title = {Experimental Evaluation of Molecular Dynamics Simulations on Multi-core Systems}, booktitle = {High Performance Computing - HiPC 2008, 15th International Conference, Bangalore, India, December 17-20, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5374}, pages = {131--141}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-89894-8\_15}, doi = {10.1007/978-3-540-89894-8\_15}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/hipc/AlamAHO08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ipps/AlamAHOV08, author = {Sadaf R. Alam and Pratul K. Agarwal and Scott S. Hampton and Hong Ong and Jeffrey S. Vetter}, title = {Impact of multicores on large-scale molecular dynamics simulations}, booktitle = {22nd {IEEE} International Symposium on Parallel and Distributed Processing, {IPDPS} 2008, Miami, Florida USA, April 14-18, 2008}, pages = {1--7}, publisher = {{IEEE}}, year = {2008}, url = {https://doi.org/10.1109/IPDPS.2008.4536181}, doi = {10.1109/IPDPS.2008.4536181}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/ipps/AlamAHOV08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/sbac-pad/LivelyTAV08, author = {Charles W. Lively and Valerie E. Taylor and Sadaf R. Alam and Jeffrey S. Vetter}, editor = {Edson Norberto C{\'{a}}cares and Walfredo Cirne and Viktor K. Prasanna}, title = {A Methodology for Developing High Fidelity Communication Models for Large-Scale Applications Targeted on Multicore Systems}, booktitle = {20th International Symposium on Computer Architecture and High Performance Computing, {SBAC-PAD} 2008, October 29 - November 1, 2008, Campo Grande, MS, Brazil}, pages = {55--62}, publisher = {{IEEE} Computer Society}, year = {2008}, url = {https://doi.org/10.1109/SBAC-PAD.2008.27}, doi = {10.1109/SBAC-PAD.2008.27}, timestamp = {Thu, 23 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/sbac-pad/LivelyTAV08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/sc/AlamBBFKMRRSVWY08, author = {Sadaf R. Alam and Richard F. Barrett and M. Bast and Mark R. Fahey and Jeffery A. Kuehn and Collin McCurdy and James H. Rogers and Philip C. Roth and Ramanan Sankaran and Jeffrey S. Vetter and Patrick H. Worley and Weikuan Yu}, title = {Early evaluation of {IBM} BlueGene/P}, booktitle = {Proceedings of the {ACM/IEEE} Conference on High Performance Computing, {SC} 2008, November 15-21, 2008, Austin, Texas, {USA}}, pages = {23}, publisher = {{IEEE/ACM}}, year = {2008}, url = {https://doi.org/10.1109/SC.2008.5214725}, doi = {10.1109/SC.2008.5214725}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/sc/AlamBBFKMRRSVWY08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/computer/AlamASVC07, author = {Sadaf R. Alam and Pratul K. Agarwal and Melissa C. Smith and Jeffrey S. Vetter and David Caliga}, title = {Using {FPGA} Devices to Accelerate Biomolecular Simulations}, journal = {Computer}, volume = {40}, number = {3}, pages = {66--73}, year = {2007}, url = {https://doi.org/10.1109/MC.2007.108}, doi = {10.1109/MC.2007.108}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/computer/AlamASVC07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/scpe/AlamAVS07, author = {Sadaf R. Alam and Pratul K. Agarwal and Jeffrey S. Vetter and Melissa C. Smith}, title = {Throughput Improvement of Molecular Dynamics Simulations Using Reconfigurable Computing}, journal = {Scalable Comput. Pract. Exp.}, volume = {8}, number = {4}, year = {2007}, url = {http://www.scpe.org/index.php/scpe/article/view/434}, timestamp = {Wed, 17 Feb 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/scpe/AlamAVS07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/asap/AlamVS07, author = {Sadaf R. Alam and Jeffrey S. Vetter and Melissa C. Smith}, title = {An Application Specific Memory Characterization Technique for Co-processor Accelerators}, booktitle = {{IEEE} International Conference on Application-Specific Systems, Architectures and Processors, {ASAP} 2007, Montr{\'{e}}al, Qu{\'{e}}bec, Canada, July 8-11, 2007}, pages = {353--358}, publisher = {{IEEE} Computer Society}, year = {2007}, url = {https://doi.org/10.1109/ASAP.2007.4459289}, doi = {10.1109/ASAP.2007.4459289}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/asap/AlamVS07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibe/AlamBV07, author = {Sadaf R. Alam and Nikhil Bhatia and Jeffrey S. Vetter}, title = {Sensitivity Analysis of Biomolecular Simulations using Symbolic Models}, booktitle = {Proceedings of the 7th {IEEE} International Conference on Bioinformatics and Bioengineering, {BIBE} 2007, October 14-17, 2007, Harvard Medical School, Boston, MA, {USA}}, pages = {294--300}, publisher = {{IEEE} Computer Society}, year = {2007}, url = {https://doi.org/10.1109/BIBE.2007.4375579}, doi = {10.1109/BIBE.2007.4375579}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bibe/AlamBV07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibe/AlamAK07, author = {Sadaf R. Alam and Pratul K. Agarwal and Jeffery A. Kuehn}, title = {Performance Evaluation of a Scalable Molecular Dynamics Simulation Framework on a Massively-Parallel System}, booktitle = {Proceedings of the 7th {IEEE} International Conference on Bioinformatics and Bioengineering, {BIBE} 2007, October 14-17, 2007, Harvard Medical School, Boston, MA, {USA}}, pages = {1459--1466}, publisher = {{IEEE} Computer Society}, year = {2007}, url = {https://doi.org/10.1109/BIBE.2007.4375777}, doi = {10.1109/BIBE.2007.4375777}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bibe/AlamAK07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cluster/AlamMV07, author = {Sadaf R. Alam and Jeremy S. Meredith and Jeffrey S. Vetter}, title = {Balancing productivity and performance on the cell broadband engine}, booktitle = {Proceedings of the 2007 {IEEE} International Conference on Cluster Computing, 17-20 September 2007, Austin, Texas, {USA}}, pages = {149--158}, publisher = {{IEEE} Computer Society}, year = {2007}, url = {https://doi.org/10.1109/CLUSTR.2007.4629227}, doi = {10.1109/CLUSTR.2007.4629227}, timestamp = {Thu, 23 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/cluster/AlamMV07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/hpcc/AlamBV07, author = {Sadaf R. Alam and Nikhil Bhatia and Jeffrey S. Vetter}, editor = {Ronald H. Perrott and Barbara M. Chapman and Jaspal Subhlok and Rodrigo Fernandes de Mello and Laurence Tianruo Yang}, title = {An Exploration of Performance Attributes for Symbolic Modeling of Emerging Processing Devices}, booktitle = {High Performance Computing and Communications, Third International Conference, {HPCC} 2007, Houston, USA, September 26-28, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4782}, pages = {683--694}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-75444-2\_64}, doi = {10.1007/978-3-540-75444-2\_64}, timestamp = {Tue, 14 May 2019 10:00:45 +0200}, biburl = {https://dblp.org/rec/conf/hpcc/AlamBV07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ipps/AlamA07, author = {Sadaf R. Alam and Pratul K. Agarwal}, title = {On the Path to Enable Multi-scale Biomolecular Simulations on PetaFLOPS Supercomputer with Multi-core Processors}, booktitle = {21th International Parallel and Distributed Processing Symposium {(IPDPS} 2007), Proceedings, 26-30 March 2007, Long Beach, California, {USA}}, pages = {1--8}, publisher = {{IEEE}}, year = {2007}, url = {https://doi.org/10.1109/IPDPS.2007.370443}, doi = {10.1109/IPDPS.2007.370443}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/ipps/AlamA07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ipps/MeredithAV07, author = {Jeremy S. Meredith and Sadaf R. Alam and Jeffrey S. Vetter}, title = {Analysis of a Computational Biology Simulation Technique on Emerging Processing Architectures}, booktitle = {21th International Parallel and Distributed Processing Symposium {(IPDPS} 2007), Proceedings, 26-30 March 2007, Long Beach, California, {USA}}, pages = {1--8}, publisher = {{IEEE}}, year = {2007}, url = {https://doi.org/10.1109/IPDPS.2007.370444}, doi = {10.1109/IPDPS.2007.370444}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/ipps/MeredithAV07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ppopp/BarrettAV07, author = {Richard F. Barrett and Sadaf R. Alam and Jeffrey S. Vetter}, editor = {Katherine A. Yelick and John M. Mellor{-}Crummey}, title = {Performance evaluation of the cray {XT3} configured with dual core opteron processors}, booktitle = {Proceedings of the 12th {ACM} {SIGPLAN} Symposium on Principles and Practice of Parallel Programming, {PPOPP} 2007, San Jose, California, USA, March 14-17, 2007}, pages = {148--149}, publisher = {{ACM}}, year = {2007}, url = {https://doi.org/10.1145/1229428.1229460}, doi = {10.1145/1229428.1229460}, timestamp = {Sun, 12 Jun 2022 19:46:08 +0200}, biburl = {https://dblp.org/rec/conf/ppopp/BarrettAV07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/sc/AlamKBLFSW07, author = {Sadaf R. Alam and Jeffery A. Kuehn and Richard F. Barrett and Jeffrey M. Larkin and Mark R. Fahey and Ramanan Sankaran and Patrick H. Worley}, editor = {Becky Verastegui}, title = {Cray {XT4:} an early evaluation for petascale scientific simulation}, booktitle = {Proceedings of the {ACM/IEEE} Conference on High Performance Networking and Computing, {SC} 2007, November 10-16, 2007, Reno, Nevada, {USA}}, pages = {39}, publisher = {{ACM} Press}, year = {2007}, url = {https://doi.org/10.1145/1362622.1362675}, doi = {10.1145/1362622.1362675}, timestamp = {Wed, 16 Oct 2019 14:14:57 +0200}, biburl = {https://dblp.org/rec/conf/sc/AlamKBLFSW07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/europar/AlamV06, author = {Sadaf R. Alam and Jeffrey S. Vetter}, editor = {Wolfgang E. Nagel and Wolfgang V. Walter and Wolfgang Lehner}, title = {Hierarchical Model Validation of Symbolic Performance Models of Scientific Kernels}, booktitle = {Euro-Par 2006, Parallel Processing, 12th International Euro-Par Conference, Dresden, Germany, August 28 - September 1, 2006, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4128}, pages = {65--77}, publisher = {Springer}, year = {2006}, url = {https://doi.org/10.1007/11823285\_8}, doi = {10.1007/11823285\_8}, timestamp = {Tue, 14 May 2019 10:00:46 +0200}, biburl = {https://dblp.org/rec/conf/europar/AlamV06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/icpp/AlamV06, author = {Sadaf R. Alam and Jeffrey S. Vetter}, title = {An Analysis of System Balance Requirements for Scientific Applications}, booktitle = {2006 International Conference on Parallel Processing {(ICPP} 2006), 14-18 August 2006, Columbus, Ohio, {USA}}, pages = {229--236}, publisher = {{IEEE} Computer Society}, year = {2006}, url = {https://doi.org/10.1109/ICPP.2006.21}, doi = {10.1109/ICPP.2006.21}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/icpp/AlamV06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/iiswc/AlamBKRV06, author = {Sadaf R. Alam and Richard F. Barrett and Jeffery A. Kuehn and Philip C. Roth and Jeffrey S. Vetter}, title = {Characterization of Scientific Workloads on Systems with Multi-Core Processors}, booktitle = {Proceedings of the 2006 {IEEE} International Symposium on Workload Characterization, {IISWC} 2006, October 25-27, 2006, San Jose, California, {USA}}, pages = {225--236}, publisher = {{IEEE} Computer Society}, year = {2006}, url = {https://doi.org/10.1109/IISWC.2006.302747}, doi = {10.1109/IISWC.2006.302747}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/iiswc/AlamBKRV06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ipps/AlamV06, author = {Sadaf R. Alam and Jeffrey S. Vetter}, title = {A framework to develop symbolic performance models of parallel applications}, booktitle = {20th International Parallel and Distributed Processing Symposium {(IPDPS} 2006), Proceedings, 25-29 April 2006, Rhodes Island, Greece}, publisher = {{IEEE}}, year = {2006}, url = {https://doi.org/10.1109/IPDPS.2006.1639625}, doi = {10.1109/IPDPS.2006.1639625}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/ipps/AlamV06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ipps/VetterADFRW06, author = {Jeffrey S. Vetter and Sadaf R. Alam and Thomas H. Dunigan Jr. and Mark R. Fahey and Philip C. Roth and Patrick H. Worley}, title = {Early evaluation of the Cray {XT3}}, booktitle = {20th International Parallel and Distributed Processing Symposium {(IPDPS} 2006), Proceedings, 25-29 April 2006, Rhodes Island, Greece}, publisher = {{IEEE}}, year = {2006}, url = {https://doi.org/10.1109/IPDPS.2006.1639300}, doi = {10.1109/IPDPS.2006.1639300}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/ipps/VetterADFRW06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ppopp/AlamVAG06, author = {Sadaf R. Alam and Jeffrey S. Vetter and Pratul K. Agarwal and Al Geist}, editor = {Josep Torrellas and Siddhartha Chatterjee}, title = {Performance characterization of molecular dynamics techniques for biomolecular simulations}, booktitle = {Proceedings of the {ACM} {SIGPLAN} Symposium on Principles and Practice of Parallel Programming, {PPOPP} 2006, New York, New York, USA, March 29-31, 2006}, pages = {59--68}, publisher = {{ACM}}, year = {2006}, url = {https://doi.org/10.1145/1122971.1122983}, doi = {10.1145/1122971.1122983}, timestamp = {Sun, 12 Jun 2022 19:46:08 +0200}, biburl = {https://dblp.org/rec/conf/ppopp/AlamVAG06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/iccS/AlamV05, author = {Sadaf R. Alam and Jeffrey S. Vetter}, editor = {Vaidy S. Sunderam and G. Dick van Albada and Peter M. A. Sloot and Jack J. Dongarra}, title = {Performance and Scalability Analysis of Cray {X1} Vectorization and Multistreaming Optimization}, booktitle = {Computational Science - {ICCS} 2005, 5th International Conference, Atlanta, GA, USA, May 22-25, 2005, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {3514}, pages = {304--312}, publisher = {Springer}, year = {2005}, url = {https://doi.org/10.1007/11428831\_38}, doi = {10.1007/11428831\_38}, timestamp = {Tue, 14 May 2019 10:00:48 +0200}, biburl = {https://dblp.org/rec/conf/iccS/AlamV05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
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