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João A. Carriço
- > Home > Persons > João A. Carriço
Publications
- 2021
- [j15]Cátia Vaz, Marta Nascimento, João A. Carriço, Tatiana Rocher, Alexandre P. Francisco:
Distance-based phylogenetic inference from typing data: a unifying view. Briefings Bioinform. 22(3) (2021) - 2020
- [i1]Cátia Vaz, Marta Nascimento, João A. Carriço, Tatiana Rocher, Alexandre P. Francisco:
Distance-based phylogenetic inference from typing data: a unifying view. CoRR abs/2006.07016 (2020) - 2018
- [j12]João A. Carriço, Maxime Crochemore, Alexandre P. Francisco, Solon P. Pissis, Bruno Ribeiro-Gonçalves, Cátia Vaz:
Fast phylogenetic inference from typing data. Algorithms Mol. Biol. 13(1): 4:1-4:14 (2018) - [j11]Andreia Sofia Teixeira, Pedro T. Monteiro, João A. Carriço, Francisco C. Santos, Alexandre P. Francisco:
Large-Scale Simulations of Bacterial Populations Over Complex Networks. J. Comput. Biol. 25(8): 850-861 (2018) - 2017
- [j10]Marta Nascimento, Adriano Sousa, Mário Ramirez, Alexandre P. Francisco, João A. Carriço, Cátia Vaz:
PHYLOViZ 2.0: providing scalable data integration and visualization for multiple phylogenetic inference methods. Bioinform. 33(1): 128-129 (2017) - [c4]Andreia Sofia Teixeira, Pedro T. Monteiro, João A. Carriço, Francisco C. Santos, Alexandre P. Francisco:
Using Spark and GraphX to Parallelize Large-Scale Simulations of Bacterial Populations over Host Contact Networks. ICA3PP 2017: 591-600 - 2016
- [j9]Bruno Ribeiro-Gonçalves, Alexandre P. Francisco, Cátia Vaz, Mário Ramirez, João André Carriço:
PHYLOViZ Online: web-based tool for visualization, phylogenetic inference, analysis and sharing of minimum spanning trees. Nucleic Acids Res. 44(Webserver-Issue): W246-W251 (2016) - 2014
- [j7]Cátia Vaz, Alexandre P. Francisco, Mickael Silva, Keith A. Jolley, James E. Bray, Hannes Pouseele, Jörg Rothgänger, Mário Ramirez, João A. Carriço:
TypOn: the microbial typing ontology. J. Biomed. Semant. 5: 43 (2014) - 2012
- [j6]Alexandre P. Francisco, Cátia Vaz, Pedro T. Monteiro, José Melo-Cristino, Mário Ramirez, João A. Carriço:
PHYLOViZ: phylogenetic inference and data visualization for sequence based typing methods. BMC Bioinform. 13: 87 (2012) - 2011
- [c3]Ricardo Santos Aires, João A. Carriço, Alexandre P. Francisco, Sara C. Madeira:
Baiacu: A Tool for the Visual Analysis of the Saccharomyces Cerevisiae Regulatory Network. PACBB 2011: 49-56 - 2010
- [c1]João Almeida, João Tiple, Mário Ramirez, José Melo-Cristino, Cátia Vaz, Alexandre P. Francisco, João A. Carriço:
An Ontology and a REST API for Sequence Based Microbial Typing Data. JBI 2010: 21-28 - 2009
- [j4]Alexandre P. Francisco, Miguel M. F. Bugalho, Mário Ramirez, João A. Carriço:
Global optimal eBURST analysis of multilocus typing data using a graphic matroid approach. BMC Bioinform. 10 (2009)
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