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2020 – today
- 2020
[j10]Ján Busa Jr.
, Ján Busa, Edik A. Ayryan, Shura Hayryan, Chin-Kun Hu, Imrich Pokorný, Jaroslav Skrivánek:
PBCAVE: Program for exact classification of the mesh points of a protein with possible internal cavities and its application to Poisson-Boltzmann equation solution. Comput. Phys. Commun. 250: 107003 (2020)
2010 – 2019
- 2015
- [j9]Ján Busa Jr., Ján Busa, Shura Hayryan, Chin-Kun Hu, Ming-Chya Wu:
CAVE-CL: An OpenCL version of the package for detection and quantitative analysis of internal cavities in a system of overlapping balls: Application to proteins. Comput. Phys. Commun. 190: 224-227 (2015) - 2012
- [j8]Ján Busa Jr., Shura Hayryan, Ming-Chya Wu, Ján Busa, Chin-Kun Hu:
ARVO-CL: The OpenCL version of the ARVO package - An efficient tool for computing the accessible surface area and the excluded volume of proteins via analytical equations. Comput. Phys. Commun. 183(11): 2494-2497 (2012) - 2010
- [j7]Ján Busa, Shura Hayryan, Chin-Kun Hu, Jaroslav Skrivánek, Ming-Chya Wu:
CAVE: A package for detection and quantitative analysis of internal cavities in a system of overlapping balls: Application to proteins. Comput. Phys. Commun. 181(12): 2116-2125 (2010)
2000 – 2009
- 2009
- [j6]Ján Busa, Shura Hayryan, Chin-Kun Hu, Jaroslav Skrivánek, Ming-Chya Wu:
Enveloping triangulation method for detecting internal cavities in proteins and algorithm for computing their surface areas and volumes. J. Comput. Chem. 30(3): 346-357 (2009) - 2007
- [j5]Ruben Ghulghazaryan, Shura Hayryan, Chin-Kun Hu:
Efficient combination of Wang-Landau and transition matrix Monte Carlo methods for protein simulations. J. Comput. Chem. 28(3): 715-726 (2007) - 2006
- [j4]Frank Eisenmenger, Ulrich H. E. Hansmann, Shura Hayryan, Chin-Kun Hu:
An enhanced version of SMMP - open-source software package for simulation of proteins. Comput. Phys. Commun. 174(5): 422-429 (2006) - 2005
- [j3]Ján Busa, Jozef Dzurina, Edik Hayryan, Shura Hayryan, Chin-Kun Hu, Ján Plávka, Imrich Pokorný, Jaroslav Skrivánek, Ming-Chya Wu:
ARVO: A Fortran package for computing the solvent accessible surface area and the excluded volume of overlapping spheres via analytic equations. Comput. Phys. Commun. 165(1): 59-96 (2005) - [j2]Shura Hayryan, Chin-Kun Hu, Jaroslav Skrivánek, Edik Hayryan, Imrich Pokorný:
A new analytical method for computing solvent-accessible surface area of macromolecules and its gradients. J. Comput. Chem. 26(4): 334-343 (2005) - 2003
- [c1]Shura Hayryan, Chin-Kun Hu, Edik Hayryan, Imrich Pokorný:
Parallel Solution of the Poisson-Boltzmann Equation for Proteins. International Conference on Computational Science 2003: 54-62 - 2001
- [j1]Shura Hayryan, Chin-Kun Hu, Shun-Yun Hu, Rung-Ji Shang:
Multicanonical parallel simulations of proteins with continuous potentials. J. Comput. Chem. 22(12): 1287-1296 (2001)
Coauthor Index
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