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James H. Degnan
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2020 – today
- 2022
- [j7]Gleb Zhelezov
, James H. Degnan:
Trying out a million genes to find the perfect pair with RTIST. Bioinform. 38(14): 3565-3573 (2022) - 2021
- [c2]Md Rashidul Hasan, Dheeman Saha, Farhan Asif Chowdhury, James H. Degnan, Abdullah Mueen:
DiffuScope: inferring post-specific diffusion network. ASONAM 2021: 407-415 - 2020
- [j6]Anastasiia Kim
, James H. Degnan:
PRANC: ML species tree estimation from the ranked gene trees under coalescence. Bioinform. 36(18): 4819-4821 (2020)
2010 – 2019
- 2018
- [j5]Elizabeth S. Allman
, James H. Degnan, John A. Rhodes
:
Species Tree Inference from Gene Splits by Unrooted STAR Methods. IEEE ACM Trans. Comput. Biol. Bioinform. 15(1): 337-342 (2018) - 2015
- [j4]Sha Zhu, James H. Degnan, Sharyn Goldstien, Bjarki Eldon
:
Hybrid-Lambda: simulation of multiple merger and Kingman gene genealogies in species networks and species trees. BMC Bioinform. 16: 292:1-292:7 (2015) - 2013
- [j3]Elizabeth S. Allman
, James H. Degnan, John A. Rhodes
:
Species Tree Inference by the STAR Method and Its Generalizations. J. Comput. Biol. 20(1): 50-61 (2013) - [c1]James H. Degnan:
Evaluating Variations on the STAR Algorithm for Relative Efficiency and Sample Sizes Needed to Reconstruct Species Trees. Pacific Symposium on Biocomputing 2013: 262-272 - 2012
- [j2]Tanja Stadler
, James H. Degnan:
A polynomial time algorithm for calculating the probability of a ranked gene tree given a species tree. Algorithms Mol. Biol. 7: 7 (2012) - [j1]James H. Degnan, Noah A. Rosenberg
, Tanja Stadler
:
A Characterization of the Set of Species Trees that Produce Anomalous Ranked Gene Trees. IEEE ACM Trans. Comput. Biol. Bioinform. 9(6): 1558-1568 (2012)
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