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ORCIDChen Li 0021
Person information
- affiliation: Monash University, Department of Microbiology, Melbourne, Australia
Other persons with the same name
- Chen Li — disambiguation page
- Chen Li 0001
![[0000-0001-8015-6870]](https://dblp.org/img/orcid-mark.12x12.png "0000-0001-8015-6870")
— University of California, Irvine, CA, USA - Chen Li 0002 — South China University of Technology, Guangzhou, China
- Chen Li 0003 — New York University, Courant Institute of Mathematical Sciences, New York, NY, USA
- Chen Li 0004 — Purdue University, School of Electrical and Computer Engineering, West Lafayette, IN, USA (and 1 more)
- Chen Li 0005 — Beijing Information Technology Institute, Beijing, China
- Chen Li 0006 — School of Economics and Management, Beijing University of Posts and Telecommunications, Beijing, China
- Chen Li 0007 — Zhejiang University School of Medicine, Department of Cell Biology and Medical Genetics, Hangzhou, China (and 2 more)
- Chen Li 0008 — Dublin City University, Dublin, Ireland
- Chen Li 0009 — Aalborg University, Department of Materials and Production, Aalborg, Denmark (and 2 more)
- Chen Li 0010 — Xi'an Jiaotong University, Institute of Synthetic Automation
- Chen Li 0011 — Xi'an Jiaotong University, School of Computer Science and Technology, National Engineering Lab for Big Data Analytics, Xi'an, China (and 2 more)
- Chen Li 0012 — University of Twente, Enschede, Netherlands
- Chen Li 0013 — Microsoft, Bellevue, WA, USA (and 1 more)
- Chen Li 0014 — Shanghai Integrated Circuit R&D Center (and 1 more)
- Chen Li 0015 (aka: Li Chen 0023) — National University of Defense Technology, Changsha, China
- Chen Li 0016 — La Trobe University
- Chen Li 0017 — Johns Hopkins University, Baltimore, MD, USA (and 2 more)
- Chen Li 0018 — Vanderbilt University, Department of Biomedical Engineering
- Chen Li 0019 — Xidian University, State Key Lab of Integrated Service Network, Xi'an, China
- Chen Li 0020 — Hunan University
- Chen Li 0022 — Northeastern University, Microscopic Image and Medical Image Analysis, Shenyang, China (and 1 more)
- Chen Li 0023 (aka: Richard Chen Li) — Hong Kong Polytechnic University (and 1 more)
- Chen Li 0024 — Harbin Engineering University, College of Information and Communication Engineering, China
- Chen Li 0025 — North China University of Technology, School of Computer Science, Beijing, China
- Chen Li 0026 — University of Nottingham, Power Electronics, Machines and Control Group, UK
- Chen Li 0027 — Nagoya University, Graduate School of Informatics, Japan (and 1 more)
- Chen Li 0029 — Zhejiang University of Technology, School of Computer Science and Technology, Hangzhou, China
- Chen Li 0030 — Northwest University, School of Information Science and Technology, Xian, China
- Chen Li 0031 — Zhejiang University, State Key Lab of CAD&CG, Zhejiang, China
- Chen Li 0033 — Xi'an Jiaotong University, School of Software Engineering, Xi'an, China
- Chen Li 0034 — National University of Defense Technology, Changsha, China
- Chen Li 0035 — East China Normal University, School of Computer Science and Technology, Shanghai, China
- Chen Li 0036 — North University of China, Science and Technology on Electronic Test and Measurement Laboratory, Taiyuan, China
- Chen Li 0037 — Tencent AI Lab
- Chen Li 0038 — National University of Singapore, Computer Science Department, Singapore
- Chen Li 0039 — University of California, Irvine, CA, USA
- Chen Li 0040 — University of New South Wales, Sydney, Australia
- Chen Li 0041 — Xi'an Jiaotong University, State Key Laboratory for Manufacturing Systems Engineering, Xi'an, China
- Chen Li 0042 — ByteDance AI-Lab, Beijing, China
- Chen Li 0043 — New York University, Tandon School of Engineering, Department of Electrical and Computer Engineering, Brooklyn, NY, USA
- Chen Li 0044 — Ayar Labs, Emeryville, CA, USA (and 1 more)
- Chen Li 0045 — Stony Brook University, NY, USA
- Chen Li 0046 — Beihang University, Beijing Advanced Innovation Center for Big Data and Brain Computing, State Key Laboratory of Software Development Environment, Beijing, China
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2020 – today
- 2024
[j30]Xiao Wang, Ziyi Chai, Shaohua Li, Yan Liu, Chen Li, Yu Jiang, Quanzhong Liu:
CTISL: a dynamic stacking multi-class classification approach for identifying cell types from single-cell RNA-seq data. Bioinform. 40(2) (2024)- [j29]Liangwei Zhao, Ran Hao, Ziyi Chai, Weiwei Fu, Wei Yang, Chen Li, Quanzhong Liu, Yu Jiang:
DeepOCR: A multi-species deep-learning framework for accurate identification of open chromatin regions in livestock. Comput. Biol. Chem. 110: 108077 (2024) - 2023
- [j28]Fang Ge, Chen Li, Shahid Iqbal, Muhammad Arif, Fuyi Li, Maha A. Thafar, Zihao Yan, Apilak Worachartcheewan, Xiaofeng Xu, Jiangning Song, Dong-Jun Yu:
VPatho: a deep learning-based two-stage approach for accurate prediction of gain-of-function and loss-of-function variants. Briefings Bioinform. 24(1) (2023) - [j27]Ruyi Chen, Fuyi Li, Xudong Guo, Yue Bi, Chen Li, Shirui Pan, Lachlan J. M. Coin, Jiangning Song:
ATTIC is an integrated approach for predicting A-to-I RNA editing sites in three species. Briefings Bioinform. 24(3) (2023) - [j26]Yan Liu, Guo Wei, Chen Li, Long-Chen Shen, Robin B. Gasser, Jiangning Song, Dijun Chen, Dong-Jun Yu:
TripletCell: a deep metric learning framework for accurate annotation of cell types at the single-cell level. Briefings Bioinform. 24(3) (2023) - [j25]Jing Xu, Fuyi Li, Chen Li, Xudong Guo, Cornelia B. Landersdorfer, Hsin-Hui Shen, Anton Y. Peleg, Jian Li, Seiya Imoto, Jianhua Yao, Tatsuya Akutsu, Jiangning Song:
iAMPCN: a deep-learning approach for identifying antimicrobial peptides and their functional activities. Briefings Bioinform. 24(4) (2023) - [j24]Tong Pan, Chen Li, Yue Bi, Zhikang Wang, Robin B. Gasser, Anthony W. Purcell, Tatsuya Akutsu, Geoffrey I. Webb, Seiya Imoto, Jiangning Song:
PFresGO: an attention mechanism-based deep-learning approach for protein annotation by integrating gene ontology inter-relationships. Bioinform. 39(3) (2023) - [j23]Jiani Ma, Chen Li, Yiwen Zhang, Zhikang Wang, Shanshan Li, Yuming Guo, Lin Zhang, Hui Liu, Xin Gao, Jiangning Song:
MULGA, a unified multi-view graph autoencoder-based approach for identifying drug-protein interaction and drug repositioning. Bioinform. 39(9) (2023) - [j22]Jing Xu, Jiarui Ou, Chen Li, Zheng Zhu, Jian Li, Hailun Zhang, Junchen Chen, Bin Yi, Wu Zhu, Weiru Zhang, Guanxiong Zhang, Qian Gao, Yehong Kuang, Jiangning Song, Xiang Chen, Hong Liu:
Multi-modality data-driven analysis of diagnosis and treatment of psoriatic arthritis. npj Digit. Medicine 6 (2023) - [j21]Chen Li, Li Song, Shuai Chen, Rong Xie, Wenjun Zhang:
Deep Online Video Stabilization Using IMU Sensors. IEEE Trans. Multim. 25: 2047-2060 (2023) - [j20]Chen Li, Li Song, Rong Xie, Wenjun Zhang:
Local Bidirection Recurrent Network for Efficient Video Deblurring with the Fused Temporal Merge Module. ACM Trans. Multim. Comput. Commun. Appl. 19(5s): 170:1-170:18 (2023) - [c8]Lianghui Ding, Hongyu Gao, Huan Lin, Chen Li, Yangyang Liu, Feng Yang:
Link-Breakage Recovery Strategies for Tactical MANET Based on OLSR. IFTC (1) 2023: 375-389 - 2022
- [j19]Fuyi Li, Shuangyu Dong, André Leier, Meiya Han, Xudong Guo, Jing Xu, Xiaoyu Wang, Shirui Pan, Cangzhi Jia, Yang Zhang, Geoffrey I. Webb, Lachlan J. M. Coin, Chen Li, Jiangning Song:
Positive-unlabeled learning in bioinformatics and computational biology: a brief review. Briefings Bioinform. 23(1) (2022) - [j18]Meng Zhang, Cangzhi Jia, Fuyi Li, Chen Li, Yan Zhu, Tatsuya Akutsu, Geoffrey I. Webb, Quan Zou, Lachlan J. M. Coin, Jiangning Song:
Critical assessment of computational tools for prokaryotic and eukaryotic promoter prediction. Briefings Bioinform. 23(2) (2022) - [j17]Varun S. Sharma, Andrea Fossati, Rodolfo Ciuffa, Marija Buljan, Evan G. Williams, Zhen Chen, Wenguang Shao, Patrick G. A. Pedrioli, Anthony W. Purcell, María Rodríguez Martínez, Jiangning Song, Matteo Manica, Ruedi Aebersold, Chen Li:
PCfun: a hybrid computational framework for systematic characterization of protein complex function. Briefings Bioinform. 23(4) (2022) - [j16]Meng Zhang, Jian Zhao, Chen Li, Fang Ge, Jing Wu, Bin Jiang, Jiangning Song, Xiaofeng Song:
csORF-finder: an effective ensemble learning framework for accurate identification of multi-species coding short open reading frames. Briefings Bioinform. 23(6) (2022) - [j15]Chen Li, Li Song, Rong Xie, Wenjun Zhang:
L0 structure-prior assisted blur-intensity aware efficient video deblurring. Neurocomputing 483: 195-209 (2022) - [j14]Zhen Chen, Xuhan Liu, Pei Zhao, Chen Li, Yanan Wang, Fuyi Li, Tatsuya Akutsu, Chris Bain, Robin B. Gasser, Junzhou Li, Zuoren Yang, Xin Gao, Lukasz A. Kurgan, Jiangning Song:
iFeatureOmega: an integrative platform for engineering, visualization and analysis of features from molecular sequences, structural and ligand data sets. Nucleic Acids Res. 50(W1): 434-447 (2022) - [c7]Chen Li, Xiaoguang Yu, Shuangyong Song, Jia Wang, Bo Zou, Xiaodong He:
SimCTC: A Simple Contrast Learning Method of Text Clustering (Student Abstract). AAAI 2022: 12997-12998 - [c6]Chen Li, Li Song, Xueyi Zou, Jiaming Guo, Youliang Yan, Wenjun Zhang:
Multi-Scale Coarse-to-Fine Transformer for Frame Interpolation. ACM Multimedia 2022: 5201-5209 - 2021
- [c5]Geyingjie Wen, Zhen Yang, Chen Li, Rong Xie, Li Song, Weiyong Cai:
3D-BitNet: Flow-Agnostic and Precise Network for video Bit-Depth Expansion. BMSB 2021: 1-6
2010 – 2019
- 2019
- [j13]Fuyi Li, Yanan Wang, Chen Li, Tatiana T. Marquez-Lago, André Leier, Neil D. Rawlings, Gholamreza Haffari, Jerico Nico De Leon Revote, Tatsuya Akutsu, Kuo-Chen Chou, Anthony W. Purcell, Robert N. Pike, Geoffrey I. Webb, Alexander Ian Smith, Trevor Lithgow, Roger J. Daly, James C. Whisstock, Jiangning Song:
Twenty years of bioinformatics research for protease-specific substrate and cleavage site prediction: a comprehensive revisit and benchmarking of existing methods. Briefings Bioinform. 20(6): 2150-2166 (2019) - [j12]Zhen Chen, Xuhan Liu, Fuyi Li, Chen Li, Tatiana T. Marquez-Lago, André Leier, Tatsuya Akutsu, Geoffrey I. Webb, Dakang Xu, Alexander Ian Smith, Lei Li, Kuo-Chen Chou, Jiangning Song:
Large-scale comparative assessment of computational predictors for lysine post-translational modification sites. Briefings Bioinform. 20(6): 2267-2290 (2019) - [j11]Fuyi Li, Yang Zhang, Anthony W. Purcell, Geoffrey I. Webb, Kuo-Chen Chou, Trevor Lithgow, Chen Li, Jiangning Song:
Positive-unlabelled learning of glycosylation sites in the human proteome. BMC Bioinform. 20(1): 112:1-112:17 (2019) - [j10]Xiaochuan Wang, Chen Li, Fuyi Li, Varun S. Sharma, Jiangning Song, Geoffrey I. Webb:
SIMLIN: a bioinformatics tool for prediction of S-sulphenylation in the human proteome based on multi-stage ensemble-learning models. BMC Bioinform. 20(1): 602:1-602:12 (2019) - 2018
- [j9]Yi An, Jiawei Wang, Chen Li, André Leier, Tatiana T. Marquez-Lago, Jonathan Wilksch, Yang Zhang, Geoffrey I. Webb, Jiangning Song, Trevor Lithgow:
Comprehensive assessment and performance improvement of effector protein predictors for bacterial secretion systems III, IV and VI. Briefings Bioinform. 19(1): 148-161 (2018) - [j8]Fuyi Li, Chen Li, Tatiana T. Marquez-Lago, André Leier, Tatsuya Akutsu, Anthony W. Purcell, Alexander Ian Smith, Trevor Lithgow, Roger J. Daly, Jiangning Song, Kuo-Chen Chou:
Quokka: a comprehensive tool for rapid and accurate prediction of kinase family-specific phosphorylation sites in the human proteome. Bioinform. 34(24): 4223-4231 (2018) - [j7]Bangli Lu, Chen Li, Qingfeng Chen, Jiangning Song:
ProBAPred: Inferring protein-protein binding affinity by incorporating protein sequence and structural features. J. Bioinform. Comput. Biol. 16(4): 1850011:1-1850011:18 (2018) - 2017
- [c4]Chen Li, Li Song, Rong Xie, Wenjun Zhang:
CNN based post-processing to improve HEVC. ICIP 2017: 4577-4580 - 2016
- [j6]Chen Li, Catherine Ching Han Chang, Jeremy Nagel, Benjamin T. Porebski, Morihiro Hayashida, Tatsuya Akutsu, Jiangning Song, Ashley M. Buckle:
Critical evaluation of in silico methods for prediction of coiled-coil domains in proteins. Briefings Bioinform. 17(2): 270-282 (2016) - [j5]Chen Li, Steve G. Androulakis, Ashley M. Buckle, Jiangning Song:
KinetochoreDB: a comprehensive online resource for the kinetochore and its related proteins. Database J. Biol. Databases Curation 2016 (2016) - [j4]Chen Li, Jeremy Nagel, Steve G. Androulakis, Christopher J. Lupton, Jiangning Song, Ashley M. Buckle:
PolyQ 2.0: an improved version of PolyQ, a database of human polyglutamine proteins. Database J. Biol. Databases Curation 2016 (2016) - [j3]Chen Li, Jeremy Nagel, Steve G. Androulakis, Jiangning Song, Ashley M. Buckle:
PolyQ 2.0: an improved version of PolyQ, a database of human polyglutamine proteins. Database J. Biol. Databases Curation 2016 (2016) - 2015
- [j2]Fuyi Li, Chen Li, Mingjun Wang, Geoffrey I. Webb, Yang Zhang, James C. Whisstock, Jiangning Song:
GlycoMine: a machine learning-based approach for predicting N-, C- and O-linked glycosylation in the human proteome. Bioinform. 31(9): 1411-1419 (2015) - 2014
- [c3]Chen Li, Xue-Liang Hua:
Towards Positive Unlabeled Learning for Parallel Data Mining: A Random Forest Framework. ADMA 2014: 573-587 - 2013
- [j1]Xiangju Qin, Yang Zhang, Chen Li, Xue Li:
Learning from data streams with only positive and unlabeled data. J. Intell. Inf. Syst. 40(3): 405-430 (2013)
2000 – 2009
- 2009
- [c2]Chen Li, Yang Zhang, Xue Li:
OcVFDT: one-class very fast decision tree for one-class classification of data streams. KDD Workshop on Knowledge Discovery from Sensor Data 2009: 79-86 - 2008
- [c1]Chen Li, Yang Zhang:
Bagging One-Class Decision Trees. FSKD (2) 2008: 420-423
Coauthor Index
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