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2020 – today
- 2024
[c1]Jonas Arruda, Yannik Schälte, Clemens Peiter, Olga Teplytska, Ulrich Jaehde, Jan Hasenauer:
An amortized approach to non-linear mixed-effects modeling based on neural posterior estimation. ICML 2024- 2023
- [j9]Emad Alamoudi
, Yannik Schälte, Robert Müller, Jörn Starruß, Nils Bundgaard, Frederik Graw, Lutz Brusch, Jan Hasenauer:
FitMultiCell: simulating and parameterizing computational models of multi-scale and multi-cellular processes. Bioinform. 39(11) (2023) - [j8]Yannik Schälte, Fabian Fröhlich, Paul J. Jost, Jakob Vanhoefer, Dilan Pathirana, Paul Stapor, Polina A. Lakrisenko, Dantong Wang, Elba Raimúndez-Álvarez, Simon Merkt, Leonard Schmiester, Philipp Städter, Stephan Grein, Erika Dudkin, Domagoj Doresic, Daniel Weindl, Jan Hasenauer:
pyPESTO: a modular and scalable tool for parameter estimation for dynamic models. Bioinform. 39(11) (2023) - [j7]Stefan T. Radev, Marvin Schmitt, Lukas Schumacher, Lasse Elsemüller, Valentin Pratz, Yannik Schälte, Ullrich Köthe, Paul-Christian Bürkner:
BayesFlow: Amortized Bayesian Workflows With Neural Networks. J. Open Source Softw. 8(90): 5702 (2023) - [i1]Stefan T. Radev, Marvin Schmitt, Lukas Schumacher, Lasse Elsemüller, Valentin Pratz, Yannik Schälte, Ullrich Köthe, Paul-Christian Bürkner:
BayesFlow: Amortized Bayesian Workflows With Neural Networks. CoRR abs/2306.16015 (2023) - 2022
- [j6]Yannik Schälte, Emmanuel Klinger, Emad Alamoudi, Jan Hasenauer:
pyABC: Efficient and robust easy-to-use approximate Bayesian computation. J. Open Source Softw. 7(74): 4304 (2022) - 2021
- [j5]Fabian Fröhlich, Daniel Weindl, Yannik Schälte, Dilan Pathirana, Lukasz Paszkowski, Glenn Terje Lines, Paul Stapor, Jan Hasenauer:
AMICI: high-performance sensitivity analysis for large ordinary differential equation models. Bioinform. 37(20): 3676-3677 (2021) - [j4]Jakob Vanhoefer, Marta R. A. Matos, Dilan Pathirana, Yannik Schälte, Jan Hasenauer:
yaml2sbml: Human-readable and -writable specification of ODE models and their conversion to SBML. J. Open Source Softw. 6(61): 3215 (2021) - [j3]Leonard Schmiester, Yannik Schälte, Frank T. Bergmann, Tacio Camba, Erika Dudkin, Janine Egert, Fabian Fröhlich, Lara Fuhrmann, Adrian L. Hauber, Svenja Kemmer, Polina A. Lakrisenko, Carolin Loos, Simon Merkt, Wolfgang Müller, Dilan Pathirana, Elba Raimúndez-Álvarez, Lukas Refisch, Marcus Rosenblatt, Paul Stapor, Philipp Städter, Dantong Wang, Franz-Georg Wieland, Julio R. Banga, Jens Timmer, Alejandro F. Villaverde, Sven Sahle, Clemens Kreutz, Jan Hasenauer, Daniel Weindl:
PEtab - Interoperable specification of parameter estimation problems in systems biology. PLoS Comput. Biol. 17(1) (2021) - 2020
- [j2]Leonard Schmiester, Yannik Schälte, Fabian Fröhlich, Jan Hasenauer, Daniel Weindl:
Efficient parameterization of large-scale dynamic models based on relative measurements. Bioinform. 36(2): 594-602 (2020) - [j1]Yannik Schälte, Jan Hasenauer:
Efficient exact inference for dynamical systems with noisy measurements using sequential approximate Bayesian computation. Bioinform. 36(Supplement-1): i551-i559 (2020)
Coauthor Index
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last updated on 2024-09-04 00:31 CEST by the dblp team
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