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Sam Abbott
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Journal Articles
- 2023
- [j10]Nikos I. Bosse
, Sam Abbott
, Anne Cori, Edwin van Leeuwen
, Johannes Bracher, Sebastian Funk
:
Scoring epidemiological forecasts on transformed scales. PLoS Comput. Biol. 19(8) (2023) - [j9]Daniel Wolffram
, Sam Abbott
, Matthias an der Heiden, Sebastian Funk
, Felix Günther, Davide Hailer, Stefan Heyder, Thomas Hotz, Jan van de Kassteele, Helmut Küchenhoff, Sören Müller-Hansen, Diellë Syliqi, Alexander Ullrich, Maximilian Weigert
, Melanie Schienle, Johannes Bracher
:
Collaborative nowcasting of COVID-19 hospitalization incidences in Germany. PLoS Comput. Biol. 19(8) (2023) - [j8]James D. Munday
, Sam Abbott
, Sophie Meakin, Sebastian Funk
:
Evaluating the use of social contact data to produce age-specific short-term forecasts of SARS-CoV-2 incidence in England. PLoS Comput. Biol. 19(9) (2023) - [j7]Christopher E. Overton
, Sam Abbott
, Rachel Christie, Fergus Cumming, Julie Day
, Owen Jones
, Rob Paton, Charlie Turner, Thomas Ward:
Nowcasting the 2022 mpox outbreak in England. PLoS Comput. Biol. 19(9) (2023) - [j6]Elisabeth K. Brockhaus
, Daniel Wolffram
, Tanja Stadler
, Michael Osthege
, Tanmay Mitra
, Jonas M. Littek, Ekaterina A. Krymova
, Anna J. Klesen, Jana S. Huisman
, Stefan Heyder
, Laura Marie Helleckes
, Matthias an der Heiden, Sebastian Funk
, Sam Abbott
, Johannes Bracher
:
Why are different estimates of the effective reproductive number so different? A case study on COVID-19 in Germany. PLoS Comput. Biol. 19(11) (2023) - 2022
- [j5]Nikos I. Bosse
, Sam Abbott
, Johannes Bracher
, Habakuk Hain, Billy J. Quilty
, Mark Jit
, Edwin van Leeuwen
, Anne Cori
, Sebastian Funk
:
Comparing human and model-based forecasts of COVID-19 in Germany and Poland. PLoS Comput. Biol. 18(9): 1010405 (2022) - 2021
- [j4]Joseph Palmer
, Katharine Sherratt
, Richard Martin-Nielson, Jonnie Bevan, Hamish Gibbs
, LSHTM CMMID COVID-19 Working Group, Sebastian Funk, Sam Abbott
:
covidregionaldata: Subnational data for COVID-19 epidemiology. J. Open Source Softw. 6(63): 3290 (2021) - [j3]Katelyn M. Gostic, Lauren McGough, Edward B. Baskerville, Sam Abbott
, Keya Joshi, Christine Tedijanto, Rebecca Kahn, Rene Niehus, James A. Hay, Pablo M. De Salazar, Joel Hellewell, Sophie Meakin, James D. Munday, Nikos I. Bosse
, Katharine Sherratt
, Robin N. Thompson, Laura F. White, Jana S. Huisman, Jérémie Scire, Sebastian Bonhoeffer, Tanja Stadler, Jacco Wallinga, Sebastian Funk
, Marc Lipsitch, Sarah Cobey:
Correction: Practical considerations for measuring the effective reproductive number, Rt. PLoS Comput. Biol. 17(12) (2021) - 2020
- [j2]Katelyn M. Gostic
, Lauren McGough, Edward B. Baskerville, Sam Abbott
, Keya Joshi, Christine Tedijanto
, Rebecca Kahn
, Rene Niehus, James A. Hay
, Pablo M. De Salazar
, Joel Hellewell, Sophie Meakin, James D. Munday, Nikos I. Bosse
, Katharine Sherratt
, Robin N. Thompson, Laura F. White, Jana S. Huisman, Jérémie Scire, Sebastian Bonhoeffer
, Tanja Stadler
, Jacco Wallinga, Sebastian Funk, Marc Lipsitch, Sarah Cobey:
Practical considerations for measuring the effective reproductive number, Rt. PLoS Comput. Biol. 16(12) (2020) - 2019
- [j1]Sam Abbott
:
getTBinR: an R package for accessing and summarising the World Health Organisation Tuberculosis data. J. Open Source Softw. 4(34): 1260 (2019)
Coauthor Index
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