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M. Gonzalo Claros
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Journal Articles
- 2018
- [j9]Pedro Seoane
, Marina Espigares, Rosario Carmona
, Álvaro Polonio
, Julia Quintana
, Enrico Cretazzo
, Josefina Bota
, Alejandro Pérez-García
, Juan de Dios Alché
, Luis Gómez, M. Gonzalo Claros
:
TransFlow: a modular framework for assembling and assessing accurate de novo transcriptomes in non-model organisms. BMC Bioinform. 19-S(14): 97-114 (2018) - [j8]Daniel Urda
, Francisco Aragón
, Rocío Bautista
, Leonardo Franco
, Francisco J. Veredas
, Manuel Gonzalo Claros
, José Manuel Jerez
:
BLASSO: integration of biological knowledge into a regularized linear model. BMC Syst. Biol. 12(5): 13-26 (2018) - 2014
- [j7]Rafael Marcos Luque Baena
, Daniel Urda
, M. Gonzalo Claros
, Leonardo Franco
, José M. Jerez
:
Robust gene signatures from microarray data using genetic algorithms enriched with biological pathway keywords. J. Biomed. Informatics 49: 32-44 (2014) - 2010
- [j6]Darío Guerrero-Fernández, Rocío Bautista
, David P. Villalobos, Francisco R. Cantón
, M. Gonzalo Claros
:
AlignMiner: a Web-based tool for detection of divergent regions in multiple sequence alignments of conserved sequences. Algorithms Mol. Biol. 5: 24 (2010) - [j5]Juan Falgueras, Antonio J. Lara, Noé Fernández-Pozo, Francisco R. Cantón
, Guillermo Pérez-Trabado
, M. Gonzalo Claros
:
SeqTrim: a high-throughput pipeline for pre-processing any type of sequence read. BMC Bioinform. 11: 38 (2010) - [j4]Sergio Ramírez, Antonio Muñoz-Merida
, Tor Johan Mikael Karlsson, Maximiliano García, Antonio J. Pérez-Pulido
, M. Gonzalo Claros
, Oswaldo Trelles
:
MOWServ: a web client for integration of bioinformatic resources. Nucleic Acids Res. 38(Web-Server-Issue): 671-676 (2010) - 2009
- [j3]Victoria Martin-Requena, Antonio Muñoz-Merida
, M. Gonzalo Claros
, Oswaldo Trelles
:
PreP+07: improvements of a user friendly tool to preprocess and analyse microarray data. BMC Bioinform. 10 (2009) - 1995
- [j2]M. Gonzalo Claros
:
MitoProt, a Macintosh application for studying mitochondrial proteins. Comput. Appl. Biosci. 11(4): 441-447 (1995) - 1994
- [j1]M. Gonzalo Claros
, Gunnar von Heijne:
TopPred II: an improved software for membrane protein structure predictions. Comput. Appl. Biosci. 10(6): 685-686 (1994)
Conference and Workshop Papers
- 2020
- [c20]Elena Espinosa, Macarena Arroyo
, Rafael Larrosa
, Manuel Manchado
, M. Gonzalo Claros
, Rocío Bautista
:
Micro-Variations from RNA-seq Experiments for Non-model Organisms. IWBBIO 2020: 542-549 - 2019
- [c19]José Córdoba-Caballero
, Pedro Seoane-Zonjic
, Manuel Manchado
, M. Gonzalo Claros
:
De novo Transcriptome Assembly of Solea senegalensis v5.0 Using TransFlow. IWBBIO (1) 2019: 48-59 - [c18]Macarena Arroyo
, Rafael Larrosa
, M. Gonzalo Claros
, Rocío Bautista
:
Expression Change Correlations Between Transposons and Their Adjacent Genes in Lung Cancers Reveal a Genomic Location Dependence and Highlights Cancer-Significant Genes. IWBBIO (1) 2019: 84-92 - [c17]Elena Lima-Cabello
, Isabel Martínez-Beas, Estefanía García-Quirós
, Rosario Carmona
, M. Gonzalo Claros
, Jose Carlos Jimenez-Lopez
, Juan de Dios Alché
:
Structural and Functional Features of Glutathione Reductase Transcripts from Olive (Olea europaea L.) Seeds. IWBBIO (1) 2019: 178-191 - 2018
- [c16]Rafael Larrosa
, Macarena Arroyo
, Rocío Bautista
, Carmen María López-Rodríguez, M. Gonzalo Claros
:
NearTrans Can Identify Correlated Expression Changes Between Retrotransposons and Surrounding Genes in Human Cancer. IWBBIO (1) 2018: 373-382 - 2017
- [c15]Estefanía García-Quirós
, Rosario Carmona
, Adoración Zafra
, M. Gonzalo Claros
, Juan de Dios Alché
:
Identification and in silico Analysis of Glutathione Reductase Transcripts Expressed in Olive (Olea europaea L.) Pollen and Pistil. IWBBIO (2) 2017: 185-195 - [c14]Marina Espigares, Pedro Seoane
, Rocío Bautista
, Julia Quintana
, Luis Gómez, M. Gonzalo Claros
:
Obtaining the Most Accurate de novo Transcriptomes for Non-model Organisms: The Case of Castanea sativa. IWBBIO (2) 2017: 489-499 - 2016
- [c13]Adoración Zafra
, José Carlos Jimenez-Lopez
, Rosario Carmona
, M. Gonzalo Claros
, Juan de Dios Alché
:
Transcriptome-Based Identification of a Seed Olive Legumin (11S Globulin). Characterization of Subunits, 3D Modelling and Molecular Assessment of Allergenicity. IWBBIO 2016: 59-70 - [c12]Rosario Carmona
, Pedro Seoane
, Adoración Zafra
, María José Jiménez-Quesada, Juan de Dios Alché
, M. Gonzalo Claros
:
Automatic Workflow for the Identification of Constitutively-Expressed Genes Based on Mapped NGS Reads. IWBBIO 2016: 403-414 - 2015
- [c11]Isabel González Gayte, Rocío Bautista Moreno
, M. Gonzalo Claros
:
DEgenes Hunter - A Self-customised Gene Expression Analysis Workflow for Non-model Organisms. IWBBIO (2) 2015: 313-321 - [c10]David Velasco
, Pedro Seoane
, M. Gonzalo Claros
:
Bioinformatics Analyses to Separate Species Specific mRNAs from Unknown Sequences in de novo Assembled Transcriptomes. IWBBIO (2) 2015: 322-332 - [c9]María José Jiménez-Quesada, Jose Ángel Traverso, Adoración Zafra, Jose C. Jimenez-Lopez
, Rosario Carmona
, M. Gonzalo Claros
, Juan D. Alché:
Identification and in silico Analysis of NADPH Oxidase Homologues Involved in Allergy from an Olive Pollen Transcriptome. IWBBIO (1) 2015: 450-459 - [c8]Adoración Zafra, Rosario Carmona
, Jose C. Jimenez-Lopez
, Amada Pulido, M. Gonzalo Claros
, Juan D. Alché:
Identification of Distinctive Variants of the Olive Pollen Allergen Ole e 5 (Cu, Zn Superoxide Dismutase) throughout the Analysis of the Olive Pollen Transcriptome. IWBBIO (1) 2015: 460-470 - 2014
- [c7]Pedro Seoane, Rosario Carmona, Rocío Bautista, Darío Guerrero-Fernández, Manuel Gonzalo Claros:
AutoFlow: an easy way to build workflows. IWBBIO 2014: 342-349 - 2013
- [c6]Darío Guerrero-Fernández, Rafael Larrosa, M. Gonzalo Claros:
FQbin a compatible and optimized format for storing and managing sequence data. IWBBIO 2013: 337-344 - [c5]Hicham Benzekri, Darío Guerrero-Fernández, Rocío Bautista, M. Gonzalo Claros:
Detecting and correcting mis-assembled reads in contigs. IWBBIO 2013: 345-351 - 2010
- [c4]Javier Perez-Florido
, Héctor Pomares
, Ignacio Rojas, José Miguel Urquiza Ortiz, Luis Javier Herrera, Manuel Gonzalo Claros
:
Effect of pre-processing methods on microarray-based SVM classifiers in affymetrix genechips. IJCNN 2010: 1-6 - [c3]Noé Fernández-Pozo, Darío Guerrero-Fernández, Rocío Bautista
, Josefa Gómez-Maldonado
, Concepción Avila, Francisco M. Cánovas
, M. Gonzalo Claros
:
GENote v.β: A Web Tool Prototype for Annotation of Unfinished Sequences in Non-model Eukaryotes. JBI 2010: 66-71 - 2009
- [c2]J. P. Florido
, Héctor Pomares
, Ignacio Rojas, José C. Calvo, José M. Urquiza, M. Gonzalo Claros
:
On Selecting the Best Pre-processing Method for Affymetrix Genechips. IWANN (1) 2009: 845-852 - [c1]David Díaz, Sergio Gálvez
, Juan Falgueras, Juan Antonio Caballero, Pilar Hernández, M. Gonzalo Claros
, Gabriel Dorado:
Intuitive Bioinformatics for Genomics Applications: Omega-Brigid Workflow Framework. IWANN (2) 2009: 1084-1091
Parts in Books or Collections
- 2008
- [p2]Juan Falgueras, Antonio J. Lara, Francisco R. Cantón
, Guillermo Pérez-Trabado
, M. Gonzalo Claros
:
SeqTrim - A Validation and Trimming Tool for All Purpose Sequence Reads. Innovations in Hybrid Intelligent Systems 2008: 353-360 - [p1]Antonio J. Lara, Guillermo Pérez-Trabado
, David P. Villalobos, Sara Díaz-Moreno, Francisco R. Cantón
, M. Gonzalo Claros
:
A Web Tool to Discover Full-Length Sequences - Full-Lengther. Innovations in Hybrid Intelligent Systems 2008: 361-368
Coauthor Index
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