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Journal Articles
- 2012
[j4]Brian S. Olson
, Irina Hashmi, Kevin Molloy, Amarda Shehu:
Basin Hopping as a General and Versatile Optimization Framework for the Characterization of Biological Macromolecules. Adv. Artif. Intell. 2012: 674832:1-674832:19 (2012)- [j3]Brian S. Olson, Kevin Molloy, S. Farid Hendi, Amarda Shehu:
Guiding Probabilistic Search of the protein conformational Space with Structural Profiles. J. Bioinform. Comput. Biol. 10(3) (2012) - 2011
- [j2]Brian S. Olson, Kevin Molloy, Amarda Shehu:
In Search of the protein Native State with a Probabilistic Sampling Approach. J. Bioinform. Comput. Biol. 9(3): 383-398 (2011) - 2010
- [j1]Amarda Shehu, Brian S. Olson:
Guiding the Search for Native-like Protein Conformations with an Ab-initio Tree-based Exploration. Int. J. Robotics Res. 29(8): 1106-1127 (2010)
Conference and Workshop Papers
- 2013
- [c11]Brian S. Olson, Amarda Shehu:
Multi-Objective Stochastic Search for Sampling Local Minima in the Protein Energy Surface. BCB 2013: 430 - [c10]Brian S. Olson, Kenneth A. De Jong, Amarda Shehu:
Off-lattice protein structure prediction with homologous crossover. GECCO 2013: 287-294 - 2012
- [c9]Brian S. Olson, Amarda Shehu:
An evolutionary search framework to efficiently sample local minima in the protein conformational space. BCB 2012: 590 - [c8]Brian S. Olson, Amarda Shehu:
Efficient basin hopping in the protein energy surface. BIBM 2012: 1-6 - [c7]Sameh N. Saleh, Brian S. Olson, Amarda Shehu:
A population-based evolutionary algorithm for sampling minima in the protein energy surface. BIBM Workshops 2012: 64-71 - [c6]Sameh N. Saleh, Brian S. Olson, Amarda Shehu:
An evolutionary framework to sample near-native protein conformations. BIBM Workshops 2012: 933 - [c5]Brian S. Olson, Amarda Shehu:
Jumping low, jumping high: Controlling hopping in the protein energy surface. BIBM Workshops 2012: 946 - 2011
- [c4]Brian S. Olson, Amarda Shehu:
Populating Local Minima in the Protein Conformational Space. BIBM 2011: 114-117 - [c3]Brian S. Olson, S. Farid Hendi, Amarda Shehu:
Protein conformational search with geometric projections. BIBM Workshops 2011: 366-373 - 2010
- [c2]Brian S. Olson, Kevin Molloy, Amarda Shehu:
Enhancing Sampling of the Conformational Space Near the Protein Native State. BIONETICS 2010: 249-263 - 2009
- [c1]Sarah M. Richardson, Brian S. Olson, Jessica S. Dymond, Randal C. Burns, Srinivasan Chandrasegaran, Jef D. Boeke, Amarda Shehu, Joel S. Bader:
Automated Design of Assemblable, Modular, Synthetic Chromosomes. PPAM (2) 2009: 280-289
Coauthor Index
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