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Edwin K. Silverman
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2020 – today
- 2024
- [j11]Georg Hahn, Sharon Marie Lutz, Julian Hecker, Dmitry Prokopenko, Michael H. Cho, Edwin K. Silverman, Scott T. Weiss, Christoph Lange:
Fast computation of the eigensystem of genomic similarity matrices. BMC Bioinform. 25(1): 43 (2024) - 2023
- [i1]Aria Masoomi, Davin Hill, Zhonghui Xu, Craig P. Hersh, Edwin K. Silverman, Peter J. Castaldi, Stratis Ioannidis
, Jennifer G. Dy:
Explanations of Black-Box Models based on Directional Feature Interactions. CoRR abs/2304.07670 (2023) - 2022
- [c9]Aria Masoomi, Davin Hill, Zhonghui Xu, Craig P. Hersh, Edwin K. Silverman, Peter J. Castaldi, Stratis Ioannidis, Jennifer G. Dy:
Explanations of Black-Box Models based on Directional Feature Interactions. ICLR 2022 - 2021
- [j10]Zifeng Wang
, Aria Masoomi, Zhonghui Xu
, Adel Boueiz
, Sool Lee
, Tingting Zhao
, Russell Bowler
, Michael H. Cho
, Edwin K. Silverman
, Craig P. Hersh
, Jennifer G. Dy
, Peter J. Castaldi:
Improved prediction of smoking status via isoform-aware RNA-seq deep learning models. PLoS Comput. Biol. 17(10) (2021) - [j9]Georg Hahn
, Sharon Marie Lutz, Nilanjana Laha
, Michael H. Cho, Edwin K. Silverman, Christoph Lange:
A fast and efficient smoothing approach to Lasso regression and an application in statistical genetics: polygenic risk scores for chronic obstructive pulmonary disease (COPD). Stat. Comput. 31(3): 35 (2021)
2010 – 2019
- 2017
- [j8]James C. Ross
, Peter J. Castaldi, Michael H. Cho, Junxiang Chen
, Yale Chang, Jennifer G. Dy, Edwin K. Silverman, George R. Washko, Raúl San José Estépar:
A Bayesian Nonparametric Model for Disease Subtyping: Application to Emphysema Phenotypes. IEEE Trans. Medical Imaging 36(1): 343-354 (2017) - [c8]Yale Chang, Junxiang Chen, Michael H. Cho, Peter J. Castaldi, Edwin K. Silverman, Jennifer G. Dy:
Clustering from Multiple Uncertain Experts. AISTATS 2017: 28-36 - [c7]Yale Chang, Junxiang Chen, Michael H. Cho, Peter J. Castaldi, Edwin K. Silverman, Jennifer G. Dy:
Multiple Clustering Views from Multiple Uncertain Experts. ICML 2017: 674-683 - [c6]Yale Chang, Junxiang Chen, Michael H. Cho, Peter J. Castaldi, Edwin K. Silverman, Jennifer G. Dy:
Clustering with Domain-Specific Usefulness Scores. SDM 2017: 207-215 - 2016
- [j7]Dmitry Prokopenko
, Julian Hecker, Edwin K. Silverman, Marcello Pagano, Markus M. Nöthen
, Christian Dina
, Christoph Lange, Heide Loehlein Fier:
Utilizing the Jaccard index to reveal population stratification in sequencing data: a simulation study and an application to the 1000 Genomes Project. Bioinform. 32(9): 1366-1372 (2016) - [c5]Junxiang Chen, Yale Chang, Brian Hobbs, Peter J. Castaldi, Michael H. Cho, Edwin K. Silverman, Jennifer G. Dy:
Interpretable Clustering via Discriminative Rectangle Mixture Model. ICDM 2016: 823-828 - 2014
- [j6]Dandi Qiao, Michael H. Cho, Heide Loehlein Fier, Per S. Bakke, Amund Gulsvik, Edwin K. Silverman, Christoph Lange:
On the simultaneous association analysis of large genomic regions: a massive multi-locus association test. Bioinform. 30(2): 157-164 (2014) - [j5]Jen-hwa Chu
, Craig P. Hersh, Peter J. Castaldi, Michael H. Cho, Benjamin A. Raby, Nan M. Laird, Russell Bowler, Stephen I. Rennard, Joseph Loscalzo, John Quackenbush
, Edwin K. Silverman:
Analyzing networks of phenotypes in complex diseases: methodology and applications in COPD. BMC Syst. Biol. 8: 78 (2014) - [j4]Kimberly Glass
, John Quackenbush, Edwin K. Silverman, Bartolome Celli, Stephen I. Rennard, Guo-Cheng Yuan, Dawn L. DeMeo:
Sexually-dimorphic targeting of functionally-related genes in COPD. BMC Syst. Biol. 8: 118 (2014) - [j3]Jörg Menche
, Amitabh Sharma, Michael H. Cho, Ruth J. Mayer, Stephen I. Rennard, Bartolome Celli, Bruce E. Miller, Nick Locantore, Ruth Tal-Singer, Soumitra Ghosh, Chris Larminie, Glyn Bradley, John H. Riley, Alvar Agusti, Edwin K. Silverman, Albert-László Barabási:
A diVIsive Shuffling Approach (VIStA) for gene expression analysis to identify subtypes in Chronic Obstructive Pulmonary Disease. BMC Syst. Biol. 8(S-2): S8 (2014) - 2012
- [j2]Heide Loehlein Fier, Sungho Won, Dmitry Prokopenko
, Taofik AlChawa, Kerstin U. Ludwig, Rolf Fimmers, Edwin K. Silverman, Marcello Pagano, Elisabeth Mangold, Christoph Lange:
'Location, Location, Location': a spatial approach for rare variant analysis and an application to a study on non-syndromic cleft lip with or without cleft palate. Bioinform. 28(23): 3027-3033 (2012) - [c4]Raúl San José Estépar
, James C. Ross, Gordon L. Kindlmann, Alejandro A. Díaz, Yuka Okajima, Ron Kikinis, Carl-Fredrik Westin, Edwin K. Silverman, George R. Washko:
Automatic airway analysis for genome-wide association studies in COPD. ISBI 2012: 1467-1470 - 2011
- [j1]Soumyaroop Bhattacharya, Shivraj Tyagi, Sorachai Srisuma, Dawn L. DeMeo, Steven Shapiro, Raphael Bueno, Edwin K. Silverman, John J. Reilly, Thomas J. Mariani:
Peripheral blood gene expression profiles in COPD subjects. J. Clin. Bioinform. 1: 12 (2011) - 2010
- [c3]James C. Ross, Raúl San José Estépar
, Gordon L. Kindlmann, Alejandro A. Díaz, Carl-Fredrik Westin, Edwin K. Silverman, George R. Washko:
Automatic Lung Lobe Segmentation Using Particles, Thin Plate Splines, and Maximum a Posteriori Estimation. MICCAI (3) 2010: 163-171
2000 – 2009
- 2009
- [c2]James C. Ross, Raúl San José Estépar
, Alejandro A. Díaz, Carl-Fredrik Westin, Ron Kikinis, Edwin K. Silverman, George R. Washko:
Lung Extraction, Lobe Segmentation and Hierarchical Region Assessment for Quantitative Analysis on High Resolution Computed Tomography Images. MICCAI (1) 2009: 690-698 - 2006
- [c1]Raúl San José Estépar, George R. Washko, Edwin K. Silverman, John J. Reilly, Ron Kikinis, Carl-Fredrik Westin:
Accurate Airway Wall Estimation Using Phase Congruency. MICCAI (2) 2006: 125-134
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