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Daniel Hoffmann
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2020 – today
- 2021
- [j21]Niklas Tötsch
, Daniel Hoffmann
:
Classifier uncertainty: evidence, potential impact, and probabilistic treatment. PeerJ Comput. Sci. 7: e398 (2021) - 2020
- [j20]Simo Kitanovski
, Daniel Hoffmann
:
IgGeneUsage: differential gene usage in immune repertoires. Bioinform. 36(11): 3590-3591 (2020) - [j19]Mario Mösch
, Gerhard Fischerauer
, Daniel Hoffmann:
A Self-Adaptive and Self-Sufficient Energy Harvesting System. Sensors 20(9): 2519 (2020) - [i1]Niklas Tötsch
, Daniel Hoffmann:
Classifier uncertainty: evidence, potential impact, and probabilistic treatment. CoRR abs/2006.11105 (2020)
2010 – 2019
- 2018
- [j18]Jean-Noël Grad
, Alba Gigante
, Christoph Wilms, Jan Nikolaj Dybowski, Ludwig Ohl, Christian Ottmann
, Carsten Schmuck, Daniel Hoffmann
:
Locating Large, Flexible Ligands on Proteins. J. Chem. Inf. Model. 58(2): 315-327 (2018) - 2017
- [j17]Mohammadkarim Saeedghalati, Farnoush Farahpour
, Bettina Budeus
, Anja Lange, Astrid M. Westendorf, Marc Seifert
, Ralf Küppers, Daniel Hoffmann
:
Quantitative Comparison of Abundance Structures of Generalized Communities: From B-Cell Receptor Repertoires to Microbiomes. PLoS Comput. Biol. 13(1) (2017) - 2016
- [c13]Jan Renz, Daniel Hoffmann, Thomas Staubitz
, Christoph Meinel:
Using A/B testing in MOOC environments. LAK 2016: 304-313 - 2015
- [c12]Pedro Lopes
, Alexandra Ion
, Willi Müller, Daniel Hoffmann, Patrik Jonell, Patrick Baudisch:
Proprioceptive Interaction. CHI Extended Abstracts 2015: 175 - [c11]Pedro Lopes
, Alexandra Ion
, Willi Mueller, Daniel Hoffmann, Patrik Jonell
, Patrick Baudisch:
Proprioceptive Interaction. CHI 2015: 939-948 - 2014
- [j16]Dominik Heider
, Jan Dybowski, Christoph Wilms, Daniel Hoffmann
:
A simple structure-based model for the prediction of HIV-1 co-receptor tropism. BioData Min. 7: 14 (2014) - [j15]Rocio Rebollido-Rios
, Shyam Bandari, Christoph Wilms, Stanislav Jakuschev, Andrea Vortkamp, Kay Grobe, Daniel Hoffmann
:
Signaling Domain of Sonic Hedgehog as Cannibalistic Calcium-Regulated Zinc-Peptidase. PLoS Comput. Biol. 10(7) (2014) - 2013
- [c10]Alan Bränzel, Christian Holz
, Daniel Hoffmann, Dominik Schmidt, Marius Knaust, Patrick Lühne, René Meusel, Stephan Richter, Patrick Baudisch:
GravitySpace: tracking users and their poses in a smart room using a pressure-sensing floor. CHI 2013: 725-734 - [c9]Alan Bränzel, Christian Holz, Daniel Hoffmann, Dominik Schmidt, Marius Knaust, Patrick Lühne, René Meusel, Stephan Richter, Patrick Baudisch:
GravitySpace: tracking users and their poses in a smart room using a pressure-sensing floor. CHI Extended Abstracts 2013: 2869-2870 - 2012
- [j14]Samuel Genheden
, Oliver Kuhn, Paulius Mikulskis, Daniel Hoffmann
, Ulf Ryde:
The Normal-Mode Entropy in the MM/GBSA Method: Effect of System Truncation, Buffer Region, and Dielectric Constant. J. Chem. Inf. Model. 52(8): 2079-2088 (2012) - [c8]Dominik Heider
, Christoph Bartenhagen, Jan Nikolaj Dybowski, Sascha Hauke, Martin Pyka, Daniel Hoffmann:
Unsupervised Dimension Reduction Methods for Protein Sequence Classification. GfKl 2012: 295-302 - 2011
- [j13]Dominik Heider
, Daniel Hoffmann
:
Interpol: An R package for preprocessing of protein sequences. BioData Min. 4: 16 (2011) - [j12]Jan Nikolaj Dybowski, Mona Riemenschneider, Sascha Hauke, Martin Pyka, Jens Verheyen, Daniel Hoffmann
, Dominik Heider
:
Improved Bevirimat resistance prediction by combination of structural and sequence-based classifiers. BioData Min. 4: 26 (2011) - 2010
- [j11]Dominik Heider
, Jens Verheyen, Daniel Hoffmann
:
Predicting Bevirimat resistance of HIV-1 from genotype. BMC Bioinform. 11: 37 (2010) - [j10]Jan Nikolaj Dybowski, Dominik Heider
, Daniel Hoffmann
:
Prediction of Co-Receptor Usage of HIV-1 from Genotype. PLoS Comput. Biol. 6(4) (2010) - [c7]Seungoh Paek, Daniel Hoffmann, Antonios Saravanos
:
Spatial contiguity and implicit learning in hypertext. HT 2010: 291-292
2000 – 2009
- 2009
- [j9]Stanislav Jakuschev, Daniel Hoffmann
:
A Novel Algorithm for Macromolecular Epitope Matching. Algorithms 2(1): 498-517 (2009) - 2008
- [j8]Wolfram Gronwald, Tim Hohm
, Daniel Hoffmann
:
Evolutionary Pareto-optimization of stably folding peptides. BMC Bioinform. 9 (2008) - 2006
- [j7]Tim Hohm
, Philipp Limbourg, Daniel Hoffmann
:
A Multiobjective Evolutionary Method for the Design of Peptidic Mimotopes. J. Comput. Biol. 13(1): 113-125 (2006) - [c6]Kirsten Roomp, Niko Beerenwinkel, Tobias Sing, Eugen Schülter, Joachim Büch, Saleta Sierra-Aragon, Martin Däumer, Daniel Hoffmann
, Rolf Kaiser, Thomas Lengauer, Joachim Selbig:
Arevir: A Secure Platform for Designing Personalized Antiretroviral Therapies Against HIV. DILS 2006: 185-194 - 2005
- [j6]Niko Beerenwinkel, Jörg Rahnenführer
, Rolf Kaiser, Daniel Hoffmann
, Joachim Selbig, Thomas Lengauer:
Mtreemix: a software package for learning and using mixture models of mutagenetic trees. Bioinform. 21(9): 2106-2107 (2005) - [j5]Niko Beerenwinkel, Tobias Sing, Thomas Lengauer, Jörg Rahnenführer
, Kirsten Roomp, Igor Savenkov, Roman Fischer, Daniel Hoffmann
, Joachim Selbig, Klaus Korn
, Hauke Walter, Thomas Berg
, Patrick Braun, Gerd Fätkenheuer, Mark Oette, Jürgen K. Rockstroh, Bernd Kupfer, Rolf Kaiser, Martin Däumer:
Computational methods for the design of effective therapies against drug resistant HIV strains. Bioinform. 21(21): 3943-3950 (2005) - [j4]Niko Beerenwinkel, Jörg Rahnenführer
, Martin Däumer, Daniel Hoffmann
, Rolf Kaiser, Joachim Selbig, Thomas Lengauer:
Learning Multiple Evolutionary Pathways from Cross-Sectional Data. J. Comput. Biol. 12(6): 584-598 (2005) - [c5]Tim Hohm
, Daniel Hoffmann:
A multi-objective evolutionary approach to peptide structure redesign and stabilization. GECCO 2005: 423-429 - [c4]Tobias Sing, Valentina Svicher
, Niko Beerenwinkel, Francesca Ceccherini-Silberstein, Martin Däumer, Rolf Kaiser, Hauke Walter, Klaus Korn, Daniel Hoffmann
, Mark Oette, Jürgen K. Rockstroh, Gerd Fätkenheuer, Carlo-Federico Perno
, Thomas Lengauer:
Characterization of Novel HIV Drug Resistance Mutations Using Clustering, Multidimensional Scaling and SVM-Based Feature Ranking. PKDD 2005: 285-296 - 2004
- [c3]Niko Beerenwinkel, Jörg Rahnenführer
, Martin Däumer, Daniel Hoffmann, Rolf Kaiser, Joachim Selbig, Thomas Lengauer:
Learning multiple evolutionary pathways from cross-sectional data. RECOMB 2004: 36-44 - 2003
- [j3]Niko Beerenwinkel, Martin Däumer, Mark Oette, Klaus Korn
, Daniel Hoffmann
, Rolf Kaiser, Thomas Lengauer, Joachim Selbig, Hauke Walter:
Geno2pheno: estimating phenotypic drug resistance from HIV-1 genotypes. Nucleic Acids Res. 31(13): 3850-3855 (2003) - [c2]Niko Beerenwinkel, Thomas Lengauer, Martin Däumer, Rolf Kaiser, Hauke Walter, Klaus Korn, Daniel Hoffmann, Joachim Selbig:
Methods for optimizing antiviral combination therapies. ISMB (Supplement of Bioinformatics) 2003: 16-25 - 2002
- [j2]Niko Beerenwinkel, Barbara Schmidt, Hauke Walter, Rolf Kaiser, Thomas Lengauer, Daniel Hoffmann
, Klaus Korn
, Joachim Selbig:
Diversity and complexity of HIV-1 drug resistance: A bioinformatics approach to predicting phenotype from genotype. Proc. Natl. Acad. Sci. USA 99(12): 8271-8276 (2002) - 2001
- [j1]Niko Beerenwinkel, Barbara Schmidt, Hauke Walter, Rolf Kaiser, Thomas Lengauer, Daniel Hoffmann
, Klaus Korn, Joachim Selbig:
Geno2pheno: Interpreting Genotypic HIV Drug Resistance Tests. IEEE Intell. Syst. 16(6): 35-41 (2001) - [c1]Niko Beerenwinkel, Barbara Schmidt, Hauke Walter, Rolf Kaiser, Thomas Lengauer, Daniel Hoffmann, Klaus Korn, Joachim Selbig:
Identifying drug resistance-associated patterns in HIV genotypes. German Conference on Bioinformatics 2001: 126-130
Coauthor Index
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