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2020 – today
- 2025
[i15]Anna Lindeberg, Guillaume E. Scholz, Nicolas Wieseke, Marc Hellmuth:
Orthology and Near-Cographs in the Context of Phylogenetic Networks. CoRR abs/2502.08746 (2025)- 2023
- [j11]David Schaller, Tom Hartmann, Manuel Lafond, Peter F. Stadler, Nicolas Wieseke, Marc Hellmuth:
Relative timing information and orthology in evolutionary scenarios. Algorithms Mol. Biol. 18(1): 16 (2023) - 2022
- [j10]Tom Hartmann, Max Bannach, Martin Middendorf, Peter F. Stadler
, Nicolas Wieseke, Marc Hellmuth:
Complete edge-colored permutation graphs. Adv. Appl. Math. 139: 102377 (2022) - [i14]David Schaller, Tom Hartmann, Manuel Lafond, Nicolas Wieseke, Marc Hellmuth, Peter F. Stadler:
Relative Timing Information and Orthology in Evolutionary Scenarios. CoRR abs/2212.02201 (2022) - 2020
- [j9]Adrian Fritz, Marc Hellmuth, Peter F. Stadler, Nicolas Wieseke:
Cograph editing: Merging modules is equivalent to editing P_4s. Art Discret. Appl. Math. 3(2) (2020) - [i13]Tom Hartmann, Max Bannach, Martin Middendorf, Peter F. Stadler, Nicolas Wieseke, Marc Hellmuth:
Complete Edge-Colored Permutation Graphs. CoRR abs/2004.07118 (2020) - [i12]David Schaller, Manuel Lafond, Peter F. Stadler, Nicolas Wieseke, Marc Hellmuth:
Indirect Identification of Horizontal Gene Transfer. CoRR abs/2012.08897 (2020)
2010 – 2019
- 2018
- [j8]Nikolai Nøjgaard, Manuela Geiß, Daniel Merkle, Peter F. Stadler, Nicolas Wieseke, Marc Hellmuth:
Time-consistent reconciliation maps and forbidden time travel. Algorithms Mol. Biol. 13(1): 2:1-2:17 (2018) - [j7]Marc Hellmuth, Nicolas Wieseke:
On tree representations of relations and graphs: symbolic ultrametrics and cograph edge decompositions. J. Comb. Optim. 36(2): 591-616 (2018) - [j6]Tom Hartmann, Nicolas Wieseke, Roded Sharan, Martin Middendorf, Matthias Bernt:
Genome Rearrangement with ILP. IEEE ACM Trans. Comput. Biol. Bioinform. 15(5): 1585-1593 (2018) - [c6]Nikolai Nøjgaard, Nadia El-Mabrouk, Daniel Merkle, Nicolas Wieseke, Marc Hellmuth:
Partial Homology Relations - Satisfiability in Terms of Di-Cographs. COCOON 2018: 403-415 - 2017
- [b1]Nicolas Wieseke:
From Homologous Genes to Phylogenetic Species Trees: On Tree Representations of Binary Relations. Leipzig University, Germany, 2017 - [c5]Nikolai Nøjgaard, Manuela Geiß, Daniel Merkle, Peter F. Stadler, Nicolas Wieseke, Marc Hellmuth:
Forbidden Time Travel: Characterization of Time-Consistent Tree Reconciliation Maps. WABI 2017: 17:1-17:12 - [i11]Marc Hellmuth, Adrian Fritz, Nicolas Wieseke, Peter F. Stadler:
Merging Modules is equivalent to Editing P4's. CoRR abs/1702.07499 (2017) - [i10]Nikolai Nøjgaard, Manuela Geiß, Peter F. Stadler, Daniel Merkle, Nicolas Wieseke, Marc Hellmuth:
Forbidden Time Travel: Characterization of Time-Consistent Tree Reconciliation Maps. CoRR abs/1705.02179 (2017) - [i9]Maribel Hernandez-Rosales, Marc Hellmuth, Nicolas Wieseke, Katharina T. Huber, Vincent Moulton, Peter F. Stadler:
From event labeled gene trees to species trees. CoRR abs/1705.04190 (2017) - [i8]Nikolai Nøjgaard, Nadia El-Mabrouk, Daniel Merkle, Nicolas Wieseke, Marc Hellmuth:
Partial Orthology, Paralogy and Xenology Relations - Satisfiability in terms of Di-Cographs. CoRR abs/1711.00504 (2017) - [i7]Manuela Geiß, John Anders, Peter F. Stadler, Nicolas Wieseke, Marc Hellmuth:
Reconstructing Gene Trees From Fitch's Xenology Relation. CoRR abs/1711.02152 (2017) - [i6]Marc Hellmuth, Nicolas Wieseke, Marcus Lechner, Hans-Peter Lenhof, Martin Middendorf, Peter F. Stadler:
Phylogenomics with Paralogs. CoRR abs/1712.06442 (2017) - 2016
- [j5]Henrike Indrischek, Nicolas Wieseke, Peter F. Stadler, Sonja J. Prohaska:
The paralog-to-contig assignment problem: high quality gene models from fragmented assemblies. Algorithms Mol. Biol. 11: 1 (2016) - [i5]Marc Hellmuth, Nicolas Wieseke:
Construction of Gene and Species Trees from Sequence Data incl. Orthologs, Paralogs, and Xenologs. CoRR abs/1602.08268 (2016) - [i4]Marc Hellmuth, Peter F. Stadler, Nicolas Wieseke:
The Mathematics of Xenology: Di-cographs, Symbolic Ultrametrics, 2-structures and Tree-representable Systems of Binary Relations. CoRR abs/1603.02467 (2016) - 2015
- [j4]Nicolas Wieseke, Tom Hartmann, Matthias Bernt, Martin Middendorf:
Cophylogenetic Reconciliation with ILP. IEEE ACM Trans. Comput. Biol. Bioinform. 12(6): 1227-1235 (2015) - [c4]Marc Hellmuth, Nicolas Wieseke:
On Symbolic Ultrametrics, Cotree Representations, and Cograph Edge Decompositions and Partitions. COCOON 2015: 609-623 - [i3]Marc Hellmuth, Nicolas Wieseke:
On Symbolic Ultrametrics, Cotree Representations, and Cograph Edge Decompositions and Partitions. CoRR abs/1501.03931 (2015) - [i2]Marc Hellmuth, Nicolas Wieseke:
On Tree Representations of Relations and Graphs: Symbolic Ultrametrics and Cograph Edge Decompositions. CoRR abs/1509.05069 (2015) - [i1]Marc Hellmuth, Adrian Fritz, Nicolas Wieseke, Peter F. Stadler:
Techniques for the Cograph Editing Problem: Module Merge is equivalent to Editing P4s. CoRR abs/1509.06983 (2015) - 2014
- [j3]Maribel Hernandez-Rosales, Nicolas Wieseke, Marc Hellmuth, Peter F. Stadler:
Simulation of gene family histories. BMC Bioinform. 15(S-3): A8 (2014) - 2013
- [c3]Matthias Bernt, Nicolas Wieseke, Martin Middendorf:
On Weighting Schemes for Gene Order Analysis. GCB 2013: 14-23 - [c2]Nicolas Wieseke, Marcus Lechner, Marcus Ludwig, Manja Marz:
POMAGO: Multiple Genome-Wide Alignment Tool for Bacteria. ISBRA 2013: 249-260 - [c1]Nicolas Wieseke, Matthias Bernt, Martin Middendorf:
Unifying Parsimonious Tree Reconciliation. WABI 2013: 200-214 - 2012
- [j2]Maribel Hernandez-Rosales, Marc Hellmuth, Nicolas Wieseke, Katharina T. Huber, Vincent Moulton, Peter F. Stadler:
From event-labeled gene trees to species trees. BMC Bioinform. 13(S-19): S6 (2012) - 2010
- [j1]Daniel Merkle, Martin Middendorf, Nicolas Wieseke:
A parameter-adaptive dynamic programming approach for inferring cophylogenies. BMC Bioinform. 11(S-1): 60 (2010)
Coauthor Index
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