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ORCIDJorma Tarhio
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2020 – today
- 2024
[j32]Jorma Tarhio
:
Searching long patterns with BNDM. Softw. Pract. Exp. 54(11): 2160-2169 (2024)- 2023
- [c67]Tamanna Chhabra, Sukhpal Singh Ghuman, Jorma Tarhio:
Approximate String Searching with AVX2 and AVX-512. PSC 2023: 57-67 - 2022
- [j31]Fernando J. Fiori, Waltteri Pakalén, Jorma Tarhio:
Approximate String Matching with SIMD. Comput. J. 65(6): 1472-1488 (2022) - 2021
- [c66]Waltteri Pakalén, Hannu Peltola, Jorma Tarhio, Bruce W. Watson:
Pitfalls of Algorithm Comparison. Stringology 2021: 16-29 - [c65]Waltteri Pakalén, Jorma Tarhio, Bruce W. Watson:
Searching with Extended Guard and Pivot Loop. Stringology 2021: 90-102 - 2020
- [j30]Sukhpal Singh Ghuman, Jorma Tarhio, Tamanna Chhabra:
Improved online algorithms for jumbled matching. Discret. Appl. Math. 274: 54-66 (2020) - [c64]Jorma Tarhio, Bruce W. Watson:
Tune-up for the Dead-Zone Algorithm. Stringology 2020: 160-167
2010 – 2019
- 2019
- [j29]Sukhpal Singh Ghuman, Emanuele Giaquinta, Jorma Tarhio:
Lyndon Factorization Algorithms for Small Alphabets and Run-Length Encoded Strings. Algorithms 12(6): 124 (2019) - 2017
- [j28]Tommi Hirvola, Jorma Tarhio:
Bit-Parallel Approximate Matching of Circular Strings with k Mismatches. ACM J. Exp. Algorithmics 22 (2017) - [j27]Tamanna Chhabra, Simone Faro, M. Oguzhan Külekci, Jorma Tarhio:
Engineering order-preserving pattern matching with SIMD parallelism. Softw. Pract. Exp. 47(5): 731-739 (2017) - [j26]Jorma Tarhio, Jan Holub, Emanuele Giaquinta:
Technology beats algorithms (in exact string matching). Softw. Pract. Exp. 47(12): 1877-1885 (2017) - [c63]Fernando J. Fiori, Waltteri Pakalén, Jorma Tarhio:
Counting Mismatches with SIMD. Stringology 2017: 51-61 - 2016
- [j25]Tamanna Chhabra, Jorma Tarhio:
A filtration method for order-preserving matching. Inf. Process. Lett. 116(2): 71-74 (2016) - [c62]Sukhpal Singh Ghuman, Jorma Tarhio:
Jumbled Matching with SIMD. Stringology 2016: 114-124 - [i2]Jorma Tarhio, Jan Holub, Emanuele Giaquinta:
Technology Beats Algorithms (in Exact String Matching). CoRR abs/1612.01506 (2016) - 2015
- [c61]Tamanna Chhabra, Emanuele Giaquinta, Jorma Tarhio:
Filtration Algorithms for Approximate Order-Preserving Matching. SPIRE 2015: 177-187 - [c60]Tamanna Chhabra, M. Oguzhan Külekci, Jorma Tarhio:
Alternative Algorithms for Order-Preserving Matching. Stringology 2015: 36-46 - [c59]Tamanna Chhabra, Sukhpal Singh Ghuman, Jorma Tarhio:
Tuning Algorithms for Jumbled Matching. Stringology 2015: 57-66 - 2014
- [j24]Hannu Peltola, Jorma Tarhio:
String matching with lookahead. Discret. Appl. Math. 163: 352-360 (2014) - [c58]Branislav Durian, Tamanna Chhabra, Sukhpal Singh Ghuman, Tommi Hirvola, Hannu Peltola, Jorma Tarhio:
Improved Two-Way Bit-parallel Search. Stringology 2014: 71-83 - [c57]Kerttu Pollari-Malmi, Jussi Rautio, Jorma Tarhio:
Speeding up Compressed Matching with SBNDM2. Stringology 2014: 110-123 - [c56]Sukhpal Singh Ghuman, Emanuele Giaquinta, Jorma Tarhio:
Alternative Algorithms for Lyndon Factorization. Stringology 2014: 169-178 - [c55]Tamanna Chhabra, Jorma Tarhio:
Order-Preserving Matching with Filtration. SEA 2014: 307-314 - [c54]Tommi Hirvola, Jorma Tarhio:
Approximate Online Matching of Circular Strings. SEA 2014: 315-325 - [i1]Sukhpal Singh Ghuman, Emanuele Giaquinta, Jorma Tarhio:
Alternative Algorithms for Lyndon Factorization. CoRR abs/1405.4892 (2014) - 2012
- [j23]Francisco Claude, Gonzalo Navarro, Hannu Peltola, Leena Salmela, Jorma Tarhio:
String matching with alphabet sampling. J. Discrete Algorithms 11: 37-50 (2012) - [c53]Travis Gagie, Kalle Karhu, Juha Kärkkäinen, Veli Mäkinen, Leena Salmela, Jorma Tarhio:
Indexed Multi-pattern Matching. LATIN 2012: 399-407 - 2011
- [c52]Kalle Karhu, Juho Mäkinen, Jussi Rautio, Jorma Tarhio, Hugh Salamon:
GAST, a Genomic Alignment Search Tool. BIOINFORMATICS 2011: 82-90 - [c51]Hannu Peltola, Jorma Tarhio:
Variations of Forward-SBNDM. Stringology 2011: 3-14 - 2010
- [j22]Leena Salmela, Jorma Tarhio, Petri Kalsi:
Approximate Boyer-Moore String Matching for Small Alphabets. Algorithmica 58(3): 591-609 (2010) - [j21]Branislav Durian, Jan Holub, Hannu Peltola, Jorma Tarhio:
Improving practical exact string matching. Inf. Process. Lett. 110(4): 148-152 (2010) - [c50]Juho Mäkinen, Jorma Tarhio, Sami Khuri:
PMSGA: A Fast DNA Fragment Assembler. BIOINFORMATICS 2010: 77-82 - [c49]Leena Salmela, Jorma Tarhio:
Approximate String Matching with Reduced Alphabet. Algorithms and Applications 2010: 210-220 - [c48]Branislav Durian, Hannu Peltola, Leena Salmela, Jorma Tarhio:
Bit-Parallel Search Algorithms for Long Patterns. SEA 2010: 129-140
2000 – 2009
- 2009
- [c47]Branislav Durian, Jan Holub, Hannu Peltola, Jorma Tarhio:
Tuning BNDM with q-Grams. ALENEX 2009: 29-37 - [c46]Leena Salmela, Jorma Tarhio, Timo Montonen:
Towards Automated Management of Compiler Assignments. CSEDU (2) 2009: 243-249 - [c45]Eric Rivals, Leena Salmela, Petteri Kiiskinen, Petri Kalsi, Jorma Tarhio:
mpscan: Fast Localisation of Multiple Reads in Genomes. WABI 2009: 246-260 - [e2]Jussi Karlgren, Jorma Tarhio, Heikki Hyyrö:
String Processing and Information Retrieval, 16th International Symposium, SPIRE 2009, Saariselkä, Finland, August 25-27, 2009, Proceedings. Lecture Notes in Computer Science 5721, Springer 2009, ISBN 978-3-642-03783-2 [contents] - 2008
- [j20]Leena Salmela, Jorma Tarhio:
Fast parameterized matching with q-grams. J. Discrete Algorithms 6(3): 408-419 (2008) - [c44]Petri Kalsi, Hannu Peltola, Jorma Tarhio:
Comparison of Exact String Matching Algorithms for Biological Sequences. BIRD 2008: 417-426 - [c43]Francisco Claude, Gonzalo Navarro, Hannu Peltola, Leena Salmela, Jorma Tarhio:
Speeding Up Pattern Matching by Text Sampling. SPIRE 2008: 87-98 - 2007
- [c42]Ilkka Jormanainen, Eija Kärnä-Lin, Lauri Lahti, Kaisa Pihlainen-Bednarik, Erkki Sutinen, Jorma Tarhio, Marjo Virnes:
A Framework for Research on Technology-Enhanced Special Education. ICALT 2007: 54-55 - [c41]Petri Kalsi, Leena Salmela, Jorma Tarhio:
Tuning Approximate Boyer-Moore for Gene Sequences. SPIRE 2007: 173-183 - [c40]Leena Salmela, Jorma Tarhio:
Algorithms for Weighted Matching. SPIRE 2007: 276-286 - [c39]Ari Korhonen, Juha Litola, Jorma Tarhio:
Platform for Elaboration of Search Results. WEBIST (2) 2007: 263-269 - [c38]Hannu Peltola, Jorma Tarhio:
On String Matching in Chunked Texts. CIAA 2007: 157-167 - 2006
- [j19]Leena Salmela, Jorma Tarhio, Jari Kytöjoki:
Multipattern string matching with q-grams. ACM J. Exp. Algorithmics 11 (2006) - [c37]Leena Salmela, Jorma Tarhio:
Sublinear Algorithms for Parameterized Matching. CPM 2006: 354-364 - 2005
- [j18]Gonzalo Navarro, Erkki Sutinen, Jorma Tarhio:
Indexing text with approximate q-grams. J. Discrete Algorithms 3(2-4): 157-175 (2005) - [j17]Gonzalo Navarro, Jorma Tarhio:
LZgrep: a Boyer-Moore string matching tool for Ziv-Lempel compressed text. Softw. Pract. Exp. 35(12): 1107-1130 (2005) - [c36]Pasi Silander, Jorma Tarhio, Erkki Sutinen:
Advanced Multiple Representation Concept Maps for Constructing Shared Conceptual Artifacts. CELDA 2005: 3-9 - 2004
- [j16]Kimmo Fredriksson, Jorma Tarhio:
Efficient String Matching in Huffman Compressed Texts. Fundam. Informaticae 63(1): 1-16 (2004) - [j15]Erkki Sutinen, Jorma Tarhio:
Approximate String Matching with Ordered q-Grams. Nord. J. Comput. 11(4): 321-343 (2004) - [c35]Pasi Silander, Erkki Sutinen, Jorma Tarhio:
Mobile Collaborative Concept Mapping - Combining Classroom Activity with Simultaneous Field Exploration. WMTE 2004: 114-118 - 2003
- [j14]Matti Lattu, Veijo Meisalo, Jorma Tarhio:
A visualisation tool as a demonstration aid. Comput. Educ. 41(2): 133-148 (2003) - [j13]Erkki Sutinen, Jorma Tarhio, Tommi Teräsvirta:
Easy Algorithm Animation on the Web. Multim. Tools Appl. 19(2): 179-194 (2003) - [j12]Kjell Lemström, Jorma Tarhio:
Transposition Invariant Pattern Matching for Multi-Track Strings. Nord. J. Comput. 10(3): 185-205 (2003) - [c34]Jari Kytöjoki, Leena Salmela, Jorma Tarhio:
Tuning String Matching for Huge Pattern Sets. CPM 2003: 211-224 - [c33]Hannu Peltola, Jorma Tarhio:
Alternative Algorithms for Bit-Parallel String Matching. SPIRE 2003: 80-94 - [c32]Kimmo Fredriksson, Jorma Tarhio:
Processing of Huffman Compressed Texts with a Super-Alphabet. SPIRE 2003: 108-121 - 2002
- [c31]Jussi Rautio, Jani Tanninen, Jorma Tarhio:
String Matching with Stopper Encoding and Code Splitting. CPM 2002: 42-52 - [c30]Jussi Rautio, Jani Tanninen, Jorma Tarhio:
String Matching with Stopper Compression. DCC 2002: 469 - [c29]Pasi J. Eronen, Jussi A. Nuutinen, Erkki Rautama, Erkki Sutinen, Jorma Tarhio:
Concept Gaming. ICCE 2002: 997-1001 - 2001
- [j11]Gonzalo Navarro, Ricardo A. Baeza-Yates, Erkki Sutinen, Jorma Tarhio:
Indexing Methods for Approximate String Matching. IEEE Data Eng. Bull. 24(4): 19-27 (2001) - [c28]Mordechai Ben-Ari, Niko Myller, Erkki Sutinen, Jorma Tarhio:
Perspectives on Program Animation with Jeliot. Software Visualization 2001: 31-45 - [c27]Ari Korhonen, Erkki Sutinen, Jorma Tarhio:
Understanding Algorithms by Means of Visualized Path Testing. Software Visualization 2001: 256-268 - [c26]Antti Karvonen, Erkki Rautama, Jorma Tarhio, Jari Turkia:
Versatile concept map viewing on the Web. ITiCSE 2001: 105-108 - [c25]Jorma Tarhio:
On Compression of Parse Trees. SPIRE 2001: 205-211 - 2000
- [c24]Gonzalo Navarro, Jorma Tarhio:
Boyer-Moore String Matching over Ziv-Lempel Compressed Text. CPM 2000: 166-180 - [c23]Gonzalo Navarro, Erkki Sutinen, Jani Tanninen, Jorma Tarhio:
Indexing Text with Approximate q-Grams. CPM 2000: 350-363 - [c22]Matti Lattu, Jorma Tarhio, Veijo Meisalo:
How a visualization tool can be used: Evaluating a tool in a research & development project. PPIG 2000: 2 - [c21]Kjell Lemström, Jorma Tarhio:
Detecting Monophonic Patterns within Polyphonic Sources. RIAO 2000: 1261-1279 - [e1]Jorma Tarhio, Sally Fincher, Daniel Joyce:
Proceedings of the 5th Annual SIGCSE Conference on Innovation and Technology in Computer Science Education, ITiCSE 2000, Helsinki, Finland, June 11-13, 2000. ACM 2000, ISBN 1-58113-207-7 [contents]
1990 – 1999
- 1998
- [j10]S.-P. Lahtinen, Erkki Sutinen, Jorma Tarhio:
Automated Animation of Algorithms with Eliot. J. Vis. Lang. Comput. 9(3): 337-349 (1998) - [c20]Veijo Meisalo, Erkki Sutinen, Jorma Tarhio, Tommi Teräsvirta:
Combining Algorithmic and Creative Problem Solving On the Web. Teleteaching 1998: 715-724 - [c19]Ainslie E. Ellis, Linda Carswell, Andrew Bernat, Daniel Deveaux, Patrice Frison, Veijo Meisalo, Jeanine Meyer, Urban Nulden, Joze Rugelj, Jorma Tarhio:
Resources, tools, and techniques for problem based learning in computing. ITiCSE-WGR 1998: 41-56 - [c18]Arne Dybdahl, Erkki Sutinen, Jorma Tarhio:
On animation features of Excel. ITiCSE 1998: 77-80 - [c17]Janne Markkanen, Pertti Saarilouma, Erkki Sutinen, Jorma Tarhio:
Visualization and imagery in teaching programming. PPIG 1998: 8 - 1997
- [j9]Jorma Tarhio, Hannu Peltola:
String Matching in the DNA Alphabet. Softw. Pract. Exp. 27(7): 851-861 (1997) - [c16]Veijo Meisalo, Erkki Sutinen, Jorma Tarhio:
Impacts of interdisciplinary dialogue to computer science education. Informatics in Higher Education 1997: 241-244 - [c15]Thomas L. Naps, Joseph Bergin, Ricardo Jiménez-Peris, Myles F. McNally, Marta Patiño-Martínez, Viera K. Proulx, Jorma Tarhio:
Using the WWW as the delivery mechanism for interactive, visualization-based instructional modules (report of the ITiCSE 1997 working group on visualization). ITiCSE-WGR 1997: 13-26 - [c14]Erkki Rautama, Erkki Sutinen, Jorma Tarhio:
Excel as an algorithm animation environment. ITiCSE 1997: 24-26 - [c13]Veijo Meisalo, Erkki Sutinen, Jorma Tarhio:
CLAP: teaching data structures in a creative way. ITiCSE 1997: 117-119 - [c12]Janne Markkanen, Erkki Sutinen, Tommi Teräsvirta, Jorma Tarhio, Erkki Rautama:
Animation of algorithms with Eliot and Jeliot (demonstration). ITiCSE-WGR 1997: 152 - [c11]S.-P. Lahtinen, Erkki Sutinen, Antti-Pekka Tuovinen, Jorma Tarhio:
Object-Oriented Visualization of Program Logic. TOOLS (23) 1997: 76-88 - [c10]J. Haajanen, M. Pesonius, Erkki Sutinen, Jorma Tarhio, Tommi Teräsvirta, P. Vanninen:
Animation of User Algorithms on the Web. VL 1997: 360-367 - 1996
- [j8]Hugh Salamon, Jorma Tarhio, K. Rønningen, G. Thomson:
On Distinguishing Unique Combinations in Biological Sequences. J. Comput. Biol. 3(3): 407-423 (1996) - [j7]Jorma Tarhio:
A sublinear algorithm for two-dimensional string matching. Pattern Recognit. Lett. 17(8): 833-838 (1996) - [j6]Petteri Jokinen, Jorma Tarhio, Esko Ukkonen:
A Comparison of Approximate String Matching Algorithms. Softw. Pract. Exp. 26(12): 1439-1458 (1996) - [c9]Erkki Sutinen, Jorma Tarhio:
Filtration with q-Samples in Approximate String Matching. CPM 1996: 50-63 - 1995
- [c8]Erkki Sutinen, Jorma Tarhio:
On Using q-Gram Locations in Approximate String Matching. ESA 1995: 327-340 - 1993
- [j5]Jorma Tarhio, Esko Ukkonen:
Approximate Boyer-Moore String Matching. SIAM J. Comput. 22(2): 243-260 (1993) - 1991
- [c7]Rieks op den Akker, Borivoj Melichar, Jorma Tarhio:
Attribute Evaluation and Parsing. Attribute Grammars, Applications and Systems 1991: 187-214 - 1990
- [j4]Jorma Tarhio:
Uncle-Atrributed Grammars. BIT 30(3): 437-449 (1990) - [c6]Jorma Tarhio, Esko Ukkonen:
Boyer-Moore Approach to Approximate String Matching (Extended Abstract). SWAT 1990: 348-359 - [c5]Rieks op den Akker, Borivoj Melichar, Jorma Tarhio:
The Hierarchy of LR-Attributed Grammars. WAGA 1990: 13-28
1980 – 1989
- 1988
- [j3]Eljas Soisalon-Soininen, Jorma Tarhio:
Looping LR Parsers. Inf. Process. Lett. 26(5): 251-253 (1988) - [j2]Jorma Tarhio, Esko Ukkonen:
A Greedy Approximation Algorithm for Constructing Shortest Common Superstrings. Theor. Comput. Sci. 57: 131-145 (1988) - [c4]Jorma Tarhio:
A Compiler Generator for Attributive Evaluation During LR Parsing. CC 1988: 146-159 - 1986
- [c3]Jorma Tarhio, Esko Ukkonen:
A Greedy Algorithm for Constructing Shortest Common Superstrings. MFCS 1986: 602-610 - [c2]Kari-Jouko Räihä, Jorma Tarhio:
A globalizing transformation for attribute grammars. SIGPLAN Symposium on Compiler Construction 1986: 74-84 - 1983
- [c1]Hannu Peltola, Hans Söderlund, Jorma Tarhio, Esko Ukkonen:
Algorithms for Some String Matching Problems Arising in Molecular Genetics. IFIP Congress 1983: 59-64 - 1982
- [j1]Jorma Tarhio:
LR Parsing of Some Ambiguous Grammars. Inf. Process. Lett. 14(3): 101-103 (1982)
Coauthor Index
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