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Publication search results
found 70 matches
- 2024
- Dylan Phelan, Daniel Gottlieb, Joshua C. Mandel, Vladimir Ignatov, James Jones, Brett Marquard, Alyssa Ellis, Kenneth D. Mandl:
Beyond compliance with the 21st Century Cures Act Rule: a patient controlled electronic health information export application programming interface. J. Am. Medical Informatics Assoc. 31(4): 901-909 (2024) - Hyewon Jeong, Sarah Jabbour, Yuzhe Yang, Rahul Thapa, Hussein Mozannar, William Jongwon Han, Nikita Mehandru, Michael Wornow, Vladislav Lialin, Xin Liu, Alejandro Lozano, Jiacheng Zhu, Rafal Dariusz Kocielnik, Keith Harrigian, Haoran Zhang, Edward Lee, Milos Vukadinovic, Aparna Balagopalan, Vincent Jeanselme, Katherine Matton, Ilker Demirel, Jason A. Fries, Parisa Rashidi, Brett K. Beaulieu-Jones, Xuhai Orson Xu, Matthew B. A. McDermott, Tristan Naumann, Monica Agrawal, Marinka Zitnik, Berk Ustun, Edward Choi, Kristen Yeom, Gamze Gürsoy, Marzyeh Ghassemi, Emma Pierson, George H. Chen, Sanjat Kanjilal, Michael Oberst, Linying Zhang, Harvineet Singh, Tom Hartvigsen, Helen Zhou, Chinasa T. Okolo:
Recent Advances, Applications, and Open Challenges in Machine Learning for Health: Reflections from Research Roundtables at ML4H 2023 Symposium. CoRR abs/2403.01628 (2024) - Jamie C. Overbeek, Alexander Partin, Thomas S. Brettin, Nicholas Chia, Oleksandr Narykov, Priyanka Vasanthakumari, Andreas Wilke, Yitan Zhu, Austin Clyde, Sara Jones, Rohan Gnanaolivu, Yuanhang Liu, Jun Jiang, Chen Wang, Carter Knutson, Andrew D. McNaughton, Neeraj Kumar, Gayara Demini Fernando, Souparno Ghosh, Cesar Sanchez-Villalobos, Ruibo Zhang, Ranadip Pal, M. Ryan Weil, Rick L. Stevens:
Assessing Reusability of Deep Learning-Based Monotherapy Drug Response Prediction Models Trained with Omics Data. CoRR abs/2409.12215 (2024) - 2023
- Jeff Jones, Elliot J. MacKrell, Ting-Yu Wang, Brett Lomenick, Michael L. Roukes, Tsui-Fen Chou:
Tidyproteomics: an open-source R package and data object for quantitative proteomics post analysis and visualization. BMC Bioinform. 24(1): 239 (2023) - Emily Alsentzer, Matthew J. Rasmussen, Romy Fontoura, Alexis L. Cull, Brett K. Beaulieu-Jones, Kathryn J. Gray, David W. Bates, Vesela P. Kovacheva:
Zero-shot interpretable phenotyping of postpartum hemorrhage using large language models. npj Digit. Medicine 6 (2023) - Evgenia Plaka, Stephen P. Jones, Brett A. Bednarcyk, Evan J. Pineda, Richard Li, Marianna Maiaru:
Verification and Validation of a Rapid Design Tool for the Analysis of the Composite Y-Joint of the D8 Double-Bubble Aircraft. CoRR abs/2302.08648 (2023) - 2022
- Edward J. Jones, Thomas F. A. Bishop, Brendan P. Malone, Patrick J. Hulme, Brett Whelan, Patrick Filippi:
Identifying causes of crop yield variability with interpretive machine learning. Comput. Electron. Agric. 192: 106632 (2022) - Marco Bernardi, Brett Hosking, Chiara Petrioli, Brian J. Bett, Daniel Jones, Veerle A. I. Huvenne, Rachel Marlow, Maaten Furlong, Steve McPhail, Andrea Munafò:
AURORA, a multi-sensor dataset for robotic ocean exploration. Int. J. Robotics Res. 41(5): 461-469 (2022) - Beatrice Amos, Cristina Aurrecoechea, Matthieu Barba, Ana Barreto, Evelina Y. Basenko, Wojciech Bazant, Robert Belnap, Ann S. Blevins, Ulrike Böhme, John Brestelli, Brian P. Brunk, Mark J. Caddick, Danielle Callan, Lahcen I. Campbell, Mikkel B. Christensen, George K. Christophides, Kathryn Crouch, Kristina Davis, Jeremy D. DeBarry, Ryan Doherty, Yikun Duan, Michael Dunn, Dave Falke, Steve Fisher, Paul Flicek, Brett Fox, Bindu Gajria, Gloria I. Giraldo-Calderón, Omar S. Harb, Elizabeth Harper, Christiane Hertz-Fowler, Mark J. Hickman, Connor Howington, Sufen Hu, Jay C. Humphrey, John Iodice, Andrew R. Jones, John Judkins, Sarah A. Kelly, Jessica C. Kissinger, Dae Kun Kwon, Kristopher Lamoureux, Daniel Lawson, Wei Li, Kallie Lies, Disha Lodha, Jamie Long, Robert M. MacCallum, Gareth Maslen, Mary Ann McDowell, Jaroslaw Nabrzyski, David S. Roos, Samuel S. C. Rund, Stephanie wever Schulman, Achchuthan Shanmugasundram, Vasily Sitnik, Drew Spruill, David Starns, Christian J. Stoeckert Jr., Sheena Shah Tomko, Haiming Wang, Susanne Warrenfeltz, Robert Wieck, Paul A. Wilkinson, Lin Xu, Jie Zheng:
VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center. Nucleic Acids Res. 50(D1): 898-911 (2022) - Oscar Esteban, Christopher J. Markiewicz, Christopher Burns, Mathias Goncalves, Dorota Jarecka, Erik Ziegler, Shoshana Berleant, David Gage Ellis, Basile Pinsard, Cindee Madison, Michael Waskom, Michael Philipp Notter, Daniel Clark, Alexandre Manhães-Savio, Dav Clark, Kesshi Jordan, Michael Dayan, Yaroslav O. Halchenko, Fred Loney, Taylor Salo, Blake E. Dewey, Hans J. Johnson, Salma Bougacha, Anisha Keshavan, Benjamin Yvernault, Carlo Hamalainen, Horea Christian, Rastko Ciric, Mathieu Dubois, Michael Joseph, Ben Cipollini, Steven Tilley, Matteo Visconti di Oleggio Castello, Alejandro de la Vega, Jason Wong, Jakub Kaczmarzyk, Julia M. Huntenburg, Michael G. Clark, Erin Benderoff, Drew Erickson, Maria de Fatima Dias, James D. Kent, Michael Hanke, Steven Giavasis, Brendan Moloney, B. Nolan Nichols, Rosalia Tungaraza, Andrea Dell'Orco, Caroline Frohlich, Demian Wassermann, Gilles de Hollander, Serge Koudoro, Arman Eshaghi, Jarrod Millman, Matteo Mancini, Thomas G. Close, Dylan M. Nielson, Gaël Varoquaux, Lea Waller, Aimi Watanabe, David Mordom, Jérémy Guillon, Timothy Robert-Fitzgerald, Andrey Chetverikov, Ariel Rokem, Benjamin T. Acland, Jessica Forbes, Ross D. Markello, Ashley Gillman, Fabio Bernardoni, Xiang-Zhen Kong, Daniel Geisler, John Salvatore, Alexandre Gramfort, Anna Doll, Colin Buchanan, Elizabeth DuPre, Siqi Liu, Alexander Schäfer, Jens Kleesiek, Sharad Sikka, Yannick Schwartz, Ali Ghayoor, John A. Lee, Aaron Mattfeld, Adam C. Richie-Halford, Franz Liem, Martin Felipe Perez-Guevara, Anibal Solon Heinsfeld, Christian Haselgrove, Joke Durnez, Leonie Lampe, Russell Poldrack, Tristan Glatard, Zvi Baratz, Alejandro Tabas, Chad Cumba, Fernando Pérez-García, Ross Blair, Shariq N. Iqbal, David Welch, Oliver Contier, William Triplett, R. Cameron Craddock, Carlos Correa, Dimitri Papadopoulos Orfanos, Jörg Stadler, Joshua D. Warner, Lucinda M. Sisk, Marcel Falkiewicz, Paul Sharp, Simon Rothmei, Sin Kim, Alejandro Weinstein, Ari E. Kahn, Erik K. Kastman, Katherine L. Bottenhorn, Martin Grignard, L. Nathan Perkins, Dale Zhou, Dmytro Bielievtsov, Gal Ben-Zvi, Gavin Cooper, Hrvoje Stojic, Tan Hui Qian, Janosch Linkersdörfer, Mandy Renfro, Oliver Hinds, Olivia Stanley, René Küttner, Wolfgang M. Pauli, Xihe Xie, Daniel R. Glen, Adam Kimbler, Benjamin Meyers, Claire Tarbert, Daniel Ginsburg, Daniel Haehn, Daniel S. Margulies, Eric Condamine, Feilong Ma, Ian B. Malone, Lukas Snoek, Matthew Brett, Matthew Cieslak, Michael Hallquist, Miguel Molina-Romero, Murat Bilgel, Nat Lee, Paul Kuntke, Raunak Jalan, Souheil Inati, Stephan Gerhard, Sulantha Mathotaarachchi, Victor Saase, Andrew N. Van, Christopher John Steele, Eduard Ort, Garikoitz Lerma-Usabiaga, Isaac Schwabacher, Jaime Arias, Jeff Lai, John Pellman, Jordi Huguet, Junhao WEN, Katrin Leinweber, Kshitij Chawla, Leon Weninger, Marc Modat, Rinat Mukhometzianov, Robbert Harms, Sami Kristian Andberg, K. Matsubara, Abel A. González Orozco, Alexandre Routier, Ana Marina, Andrew Davison, Andrew Floren, Anne Park, Brian Cheung, Conor McDermottroe, Daniel C. McNamee, Dmitry Shachnev, Dorian Vogel, Guillaume Flandin, Henry Jones, Ivan Gonzalez, Jan Varada, Kai Schlamp, Kornelius Podranski, Lijie Huang, Maxime Noel, Nicolas Pannetier, Ole Numssen, Ranjeet Khanuja, Sebastian Urchs, Thomas Nickson, William Broderick, Arielle Tambini, Paul Glad Mihai, Krzysztof J. Gorgolewski, Satrajit S. Ghosh:
nipy/nipype: 1.7.1. Zenodo, 2022 - Oscar Esteban, Christopher J. Markiewicz, Christopher Burns, Mathias Goncalves, Dorota Jarecka, Erik Ziegler, Shoshana Berleant, David Gage Ellis, Basile Pinsard, Cindee Madison, Michael Waskom, Michael Philipp Notter, Daniel Clark, Alexandre Manhães-Savio, Dav Clark, Kesshi Jordan, Michael Dayan, Yaroslav O. Halchenko, Fred Loney, Martin Nørgaard, Taylor Salo, Blake E. Dewey, Hans J. Johnson, Salma Bougacha, Anisha Keshavan, Benjamin Yvernault, Carlo Hamalainen, Horea Christian, Rastko Ciric, Mathieu Dubois, Michael Joseph, Ben Cipollini, Steven Tilley, Matteo Visconti di Oleggio Castello, Alejandro de la Vega, Jason Wong, Jakub Kaczmarzyk, Julia M. Huntenburg, Michael G. Clark, James D. Kent, Erin Benderoff, Drew Erickson, Maria de Fatima Dias, Michael Hanke, Steven Giavasis, Brendan Moloney, B. Nolan Nichols, Rosalia Tungaraza, Andrea Dell'Orco, Caroline Frohlich, Demian Wassermann, Gilles de Hollander, Serge Koudoro, Arman Eshaghi, Jarrod Millman, Matteo Mancini, Thomas G. Close, Dylan M. Nielson, Gaël Varoquaux, Lea Waller, Aimi Watanabe, David Mordom, Jérémy Guillon, Timothy Robert-Fitzgerald, Andrey Chetverikov, Ariel Rokem, Benjamin T. Acland, Jessica Forbes, Ross Markello, Ashley Gillman, Fabio Bernardoni, Xiang-Zhen Kong, Daniel Geisler, John Salvatore, Alexandre Gramfort, Anna Doll, Colin Buchanan, Elizabeth DuPre, Siqi Liu, Alexander Schäfer, Jens Kleesiek, Sharad Sikka, Yannick Schwartz, Ali Ghayoor, John A. Lee, Aaron Mattfeld, Adam C. Richie-Halford, Franz Liem, Martin Felipe Perez-Guevara, Anibal Solon Heinsfeld, Christian Haselgrove, Joke Durnez, Leonie Lampe, Russell Poldrack, Tristan Glatard, Zvi Baratz, Alejandro Tabas, Chad Cumba, Fernando Pérez-García, Ross Blair, Shariq N. Iqbal, David Welch, Oliver Contier, William Triplett, R. Cameron Craddock, Carlos Correa, Dimitri Papadopoulos Orfanos, Jörg Stadler, Joshua D. Warner, Lucinda M. Sisk, Marcel Falkiewicz, Paul Sharp, Simon Rothmei, Sin Kim, Alejandro Weinstein, Ari E. Kahn, Erik K. Kastman, Katherine L. Bottenhorn, Martin Grignard, L. Nathan Perkins, Dale Zhou, Dmytro Bielievtsov, Gal Ben-Zvi, Gavin Cooper, Hrvoje Stojic, Tan Hui Qian, Janosch Linkersdörfer, Mandy Renfro, Oliver Hinds, Olivia Stanley, René Küttner, Wolfgang M. Pauli, Xihe Xie, Daniel R. Glen, Adam Kimbler, Benjamin Meyers, Claire Tarbert, Daniel Ginsburg, Daniel Haehn, Daniel S. Margulies, Eric Condamine, Feilong Ma, Ian B. Malone, Lukas Snoek, Matthew Brett, Matthew Cieslak, Michael Hallquist, Miguel Molina-Romero, Murat Bilgel, Nat Lee, Paul Kuntke, Raunak Jalan, Souheil Inati, Stephan Gerhard, Sulantha Mathotaarachchi, Victor Saase, Andrew N. Van, Christopher John Steele, Eduard Ort, Garikoitz Lerma-Usabiaga, Ghislain Vaillant, Isaac Schwabacher, Jaime Arias, Jeff Lai, John Pellman, Jordi Huguet, Junhao WEN, Katrin Leinweber, Kshitij Chawla, Leon Weninger, Marc Modat, Rinat Mukhometzianov, Robbert Harms, Sami Kristian Andberg, K. Matsubara, Abel A. González Orozco, Alexandre Routier, Ana Marina, Andrew Davison, Andrew Floren, Anne Park, Blaise Frederick, Brian Cheung, Conor McDermottroe, Daniel C. McNamee, Dmitry Shachnev, Dorian Vogel, Guillaume Flandin, Henry Jones, Ivan Gonzalez, Jan Varada, Kai Schlamp, Kornelius Podranski, Lijie Huang, Maxime Noel, Nicolas Pannetier, Ole Numssen, Ranjeet Khanuja, Sebastian Urchs, Sunjae Shim, Thomas Nickson, William Broderick, Arielle Tambini, Paul Glad Mihai, Krzysztof J. Gorgolewski, Satrajit S. Ghosh:
nipy/nipype: 1.8.0. Zenodo, 2022 - Oscar Esteban, Christopher J. Markiewicz, Christopher Burns, Mathias Goncalves, Dorota Jarecka, Erik Ziegler, Shoshana Berleant, David Gage Ellis, Basile Pinsard, Cindee Madison, Michael Waskom, Michael Philipp Notter, Daniel Clark, Alexandre Manhães-Savio, Dav Clark, Kesshi Jordan, Michael Dayan, Yaroslav O. Halchenko, Fred Loney, Martin Nørgaard, Taylor Salo, Blake E. Dewey, Hans J. Johnson, Salma Bougacha, Anisha Keshavan, Benjamin Yvernault, Carlo Hamalainen, Horea Christian, Rastko Ciric, Mathieu Dubois, Michael Joseph, Ben Cipollini, Steven Tilley, Matteo Visconti di Oleggio Castello, Alejandro de la Vega, Jason Wong, Jakub Kaczmarzyk, Julia M. Huntenburg, Michael G. Clark, James D. Kent, Erin Benderoff, Drew Erickson, Maria de Fatima Dias, Michael Hanke, Steven Giavasis, Brendan Moloney, B. Nolan Nichols, Rosalia Tungaraza, Andrea Dell'Orco, Caroline Frohlich, Demian Wassermann, Gilles de Hollander, Serge Koudoro, Arman Eshaghi, Jarrod Millman, Matteo Mancini, Thomas G. Close, Dylan M. Nielson, Gaël Varoquaux, Lea Waller, Aimi Watanabe, David Mordom, Jérémy Guillon, Timothy Robert-Fitzgerald, Andrey Chetverikov, Ariel Rokem, Benjamin T. Acland, Jessica Forbes, Ross Markello, Ashley Gillman, Fabio Bernardoni, Xiang-Zhen Kong, Daniel Geisler, John Salvatore, Alexandre Gramfort, Anna Doll, Colin Buchanan, Elizabeth DuPre, Siqi Liu, Alexander Schäfer, Jens Kleesiek, Sharad Sikka, Yannick Schwartz, Ali Ghayoor, John A. Lee, Aaron Mattfeld, Adam C. Richie-Halford, Franz Liem, Martin Felipe Perez-Guevara, Anibal Solon Heinsfeld, Christian Haselgrove, Joke Durnez, Leonie Lampe, Russell Poldrack, Tristan Glatard, Zvi Baratz, Alejandro Tabas, Chad Cumba, Fernando Pérez-García, Ross Blair, Shariq N. Iqbal, David Welch, Oliver Contier, William Triplett, R. Cameron Craddock, Carlos Correa, Dimitri Papadopoulos Orfanos, Jörg Stadler, Joshua D. Warner, Lucinda M. Sisk, Marcel Falkiewicz, Paul Sharp, Simon Rothmei, Sin Kim, Alejandro Weinstein, Ari E. Kahn, Erik K. Kastman, Katherine L. Bottenhorn, Martin Grignard, L. Nathan Perkins, Dale Zhou, Dmytro Bielievtsov, Gal Ben-Zvi, Gavin Cooper, Hrvoje Stojic, Tan Hui Qian, Janosch Linkersdörfer, Mandy Renfro, Oliver Hinds, Olivia Stanley, René Küttner, Wolfgang M. Pauli, Xihe Xie, Daniel R. Glen, Adam Kimbler, Benjamin Meyers, Claire Tarbert, Daniel Ginsburg, Daniel Haehn, Daniel S. Margulies, Eric Condamine, Feilong Ma, Ian B. Malone, Lukas Snoek, Matthew Brett, Matthew Cieslak, Michael Hallquist, Miguel Molina-Romero, Murat Bilgel, Nat Lee, Paul Kuntke, Raunak Jalan, Souheil Inati, Stephan Gerhard, Sulantha Mathotaarachchi, Victor Saase, Andrew N. Van, Christopher John Steele, Eduard Ort, Garikoitz Lerma-Usabiaga, Ghislain Vaillant, Isaac Schwabacher, Jaime Arias, Jeff Lai, John Pellman, Jordi Huguet, Junhao WEN, Katrin Leinweber, Kshitij Chawla, Leon Weninger, Marc Modat, Rinat Mukhometzianov, Robbert Harms, Sami Kristian Andberg, K. Matsubara, Abel A. González Orozco, Alexandre Routier, Ana Marina, Andrew Davison, Andrew Floren, Anne Park, Blaise Frederick, Brian Cheung, Conor McDermottroe, Daniel C. McNamee, Dmitry Shachnev, Dorian Vogel, Guillaume Flandin, Henry Jones, Ivan Gonzalez, Jan Varada, Kai Schlamp, Kornelius Podranski, Lijie Huang, Maxime Noel, Nicolas Pannetier, Ole Numssen, Ranjeet Khanuja, Sebastian Urchs, Sunjae Shim, Thomas Nickson, William Broderick, Arielle Tambini, Paul Glad Mihai, Krzysztof J. Gorgolewski, Satrajit S. Ghosh:
nipy/nipype: 1.8.1. Zenodo, 2022 - Oscar Esteban, Christopher J. Markiewicz, Christopher Burns, Mathias Goncalves, Dorota Jarecka, Erik Ziegler, Shoshana Berleant, David Gage Ellis, Basile Pinsard, Cindee Madison, Michael Waskom, Michael Philipp Notter, Daniel Clark, Alexandre Manhães-Savio, Dav Clark, Kesshi Jordan, Michael Dayan, Yaroslav O. Halchenko, Fred Loney, Martin Nørgaard, Taylor Salo, Blake E. Dewey, Hans J. Johnson, Salma Bougacha, Anisha Keshavan, Benjamin Yvernault, Carlo Hamalainen, Horea Christian, Rastko Ciric, Mathieu Dubois, Michael Joseph, Ben Cipollini, Steven Tilley, Matteo Visconti di Oleggio Castello, Alejandro de la Vega, Jason Wong, Jakub Kaczmarzyk, Julia M. Huntenburg, Michael G. Clark, James D. Kent, Erin Benderoff, Drew Erickson, Maria de Fatima Dias, Michael Hanke, Steven Giavasis, Brendan Moloney, B. Nolan Nichols, Rosalia Tungaraza, Andrea Dell'Orco, Caroline Frohlich, Demian Wassermann, Gilles de Hollander, Serge Koudoro, Arman Eshaghi, K. Jarrod Millman, Matteo Mancini, Thomas G. Close, Dylan M. Nielson, Gaël Varoquaux, Lea Waller, Aimi Watanabe, David Mordom, Jérémy Guillon, Timothy Robert-Fitzgerald, Andrey Chetverikov, Ariel Rokem, Benjamin T. Acland, Jessica Forbes, Ross Markello, Ashley Gillman, Fabio Bernardoni, Xiang-Zhen Kong, Daniel Geisler, John Salvatore, Alexandre Gramfort, Anna Doll, Colin Buchanan, Elizabeth DuPre, Siqi Liu, Alexander Schäfer, Jens Kleesiek, Sharad Sikka, Yannick Schwartz, Ali Ghayoor, John A. Lee, Aaron Mattfeld, Adam C. Richie-Halford, Franz Liem, Ghislain Vaillant, Martin Felipe Perez-Guevara, Anibal Solon Heinsfeld, Christian Haselgrove, Joke Durnez, Leonie Lampe, Russell Poldrack, Tristan Glatard, Zvi Baratz, Alejandro Tabas, Chad Cumba, Fernando Pérez-García, Ross Blair, Shariq N. Iqbal, David Welch, Gal Ben-Zvi, Oliver Contier, William Triplett, R. Cameron Craddock, Carlos Correa, Dimitri Papadopoulos Orfanos, Jörg Stadler, Joshua D. Warner, Lucinda M. Sisk, Marcel Falkiewicz, Paul Sharp, Simon Rothmei, Sin Kim, Alejandro Weinstein, Ari E. Kahn, Erik K. Kastman, Katherine L. Bottenhorn, Martin Grignard, L. Nathan Perkins, Dale Zhou, Dmytro Bielievtsov, Gavin Cooper, Hrvoje Stojic, Tan Hui Qian, Janosch Linkersdörfer, Mandy Renfro, Oliver Hinds, Olivia Stanley, René Küttner, Wolfgang M. Pauli, Xihe Xie, Daniel R. Glen, Adam Kimbler, Benjamin Meyers, Claire Tarbert, Daniel Ginsburg, Daniel Haehn, Daniel S. Margulies, Eric Condamine, Feilong Ma, Ian B. Malone, Lukas Snoek, Matthew Brett, Matthew Cieslak, Michael Hallquist, Miguel Molina-Romero, Murat Bilgel, Nat Lee, Paul Kuntke, Raunak Jalan, Souheil Inati, Stephan Gerhard, Sulantha Mathotaarachchi, Victor Saase, Andrew N. Van, Christopher John Steele, Eduard Ort, Garikoitz Lerma-Usabiaga, Isaac Schwabacher, Jaime Arias, Jeff Lai, John Pellman, Jordi Huguet, Junhao WEN, Katrin Leinweber, Kshitij Chawla, Leon Weninger, Marc Modat, Rinat Mukhometzianov, Robbert Harms, Sami Kristian Andberg, K. Matsubara, Abel A. González Orozco, Alexandre Routier, Ana Marina, Andrew Davison, Andrew Floren, Anne Park, Blaise Frederick, Brian Cheung, Conor McDermottroe, Daniel C. McNamee, Dmitry Shachnev, Dorian Vogel, Guillaume Flandin, Henry Jones, Ivan Gonzalez, Jan Varada, Kai Schlamp, Kornelius Podranski, Lijie Huang, Maxime Noel, Nicolas Pannetier, Ole Numssen, Ranjeet Khanuja, Sebastian Urchs, Sunjae Shim, Thomas Nickson, William Broderick, Arielle Tambini, Paul Glad Mihai, Krzysztof J. Gorgolewski, Satrajit S. Ghosh:
nipy/nipype: 1.8.3. Zenodo, 2022 - Boleslaw L. Osinski, Aïcha BenTaieb, Irvin Ho, Ryan D. Jones, Rohan P. Joshi, Andrew Westley, Michael Carlson, Caleb Willis, Luke Schleicher, Brett M. Mahon, Martin C. Stumpe:
AI-augmented histopathologic review using image analysis to optimize DNA yield and tumor purity from FFPE slides. CoRR abs/2203.13948 (2022) - 2021
- Jeffrey G. Klann, Hossein Estiri, Griffin M. Weber, Bertrand Moal, Paul Avillach, Chuan Hong, Amelia L. M. Tan, Brett K. Beaulieu-Jones, Victor M. Castro, Thomas Maulhardt, Alon Geva, Alberto Malovini, Andrew M. South, Shyam Visweswaran, Michele Morris, Malarkodi J. Samayamuthu, Gilbert S. Omenn, Kee Yuan Ngiam, Kenneth D. Mandl, Martin Boeker, Karen L. Olson, Danielle L. Mowery, Robert W. Follett, David A. Hanauer, Riccardo Bellazzi, Jason H. Moore, Ne-Hooi Will Loh, Douglas S. Bell, Kavishwar B. Wagholikar, Luca Chiovato, Valentina Tibollo, Siegbert Rieg, Anthony L. L. J. Li, Vianney Jouhet, Emily Schriver, Zongqi Xia, Meghan Hutch, Yuan Luo, Isaac S. Kohane, Gabriel A. Brat, Shawn N. Murphy:
Validation of an internationally derived patient severity phenotype to support COVID-19 analytics from electronic health record data. J. Am. Medical Informatics Assoc. 28(7): 1411-1420 (2021) - Brett K. Beaulieu-Jones, William Yuan, Gabriel A. Brat, Andrew L. Beam, Griffin M. Weber, Marshall Ruffin, Isaac S. Kohane:
Machine learning for patient risk stratification: standing on, or looking over, the shoulders of clinicians? npj Digit. Medicine 4 (2021) - Brett K. Beaulieu-Jones, Christian Darabos, Dokyoon Kim, Anurag Verma, Shilpa Nadimpalli Kobren:
Innovative methodological approaches for data integration to derive patterns across diverse, large-scale biomedical datasets. PSB 2021 - Mohammed F. Farghally, Mostafa Mohammed, Hamdy F. F. Mahmoud, Margaret Ellis, Derek Haqq, Molly Domino, Brett Jones, Clifford A. Shaffer:
The Online Transition of Two CS Courses in Response to COVID-19. SIGCSE 2021: 1251 - Marco Bernardi, Brett Hosking, Chiara Petrioli, Brian J. Bett, Daniel Jones, Veerle A. I. Huvenne, Rachel Marlow, Maaten Furlong, Steve McPhail, Andrea Munafò:
AURORA, A multi sensor dataset for robotic ocean exploration. IEEE DataPort, 2021 - Oscar Esteban, Christopher J. Markiewicz, Christopher Burns, Mathias Goncalves, Dorota Jarecka, Erik Ziegler, Shoshana Berleant, David Gage Ellis, Basile Pinsard, Cindee Madison, Michael Waskom, Michael Philipp Notter, Daniel Clark, Alexandre Manhães-Savio, Dav Clark, Kesshi Jordan, Michael Dayan, Yaroslav O. Halchenko, Fred Loney, Taylor Salo, Blake E. Dewey, Hans J. Johnson, Salma Bougacha, Anisha Keshavan, Benjamin Yvernault, Carlo Hamalainen, Horea Christian, Rastko Ciric, Mathieu Dubois, Michael Joseph, Ben Cipollini, Steven Tilley, Matteo Visconti di Oleggio Castello, Alejandro de la Vega, Jason Wong, Jakub Kaczmarzyk, Julia M. Huntenburg, Michael G. Clark, Erin Benderoff, Drew Erickson, James D. Kent, Michael Hanke, Steven Giavasis, Brendan Moloney, B. Nolan Nichols, Rosalia Tungaraza, Caroline Frohlich, Demian Wassermann, Gilles de Hollander, Andrea Dell'Orco, Arman Eshaghi, Jarrod Millman, Matteo Mancini, Thomas G. Close, Dylan M. Nielson, Gaël Varoquaux, Aimi Watanabe, David Mordom, Lea Waller, Fátima Machado, Jérémy Guillon, Serge Koudoro, Timothy Robert-Fitzgerald, Andrey Chetverikov, Ariel Rokem, Benjamin T. Acland, Jessica Forbes, Ross D. Markello, Ashley Gillman, Xiang-Zhen Kong, Daniel Geisler, John Salvatore, Alexandre Gramfort, Anna Doll, Colin Buchanan, Elizabeth DuPre, Siqi Liu, Alexander Schäfer, Jens Kleesiek, Sharad Sikka, Yannick Schwartz, Ali Ghayoor, John A. Lee, Aaron Mattfeld, Adam C. Richie-Halford, Franz Liem, Martin Felipe Perez-Guevara, Anibal Solon Heinsfeld, Christian Haselgrove, Joke Durnez, Leonie Lampe, Russell Poldrack, Tristan Glatard, Alejandro Tabas, Chad Cumba, Fernando Pérez-García, Ross Blair, Shariq N. Iqbal, Zvi Baratz, David Welch, Oliver Contier, William Triplett, R. Cameron Craddock, Carlos Correa, Dimitri Papadopoulos Orfanos, Jörg Stadler, Joshua D. Warner, Lucinda M. Sisk, Marcel Falkiewicz, Paul Sharp, Simon Rothmei, Sin Kim, Alejandro Weinstein, Ari E. Kahn, Erik K. Kastman, Katherine L. Bottenhorn, Martin Grignard, L. Nathan Perkins, Dale Zhou, Dmytro Bielievtsov, Gal Ben-Zvi, Gavin Cooper, Hrvoje Stojic, Janosch Linkersdörfer, Mandy Renfro, Oliver Hinds, Olivia Stanley, René Küttner, Wolfgang M. Pauli, Daniel R. Glen, Adam Kimbler, Benjamin Meyers, Claire Tarbert, Daniel Ginsburg, Daniel Haehn, Daniel S. Margulies, Eric Condamine, Feilong Ma, Ian B. Malone, Lukas Snoek, Matthew Brett, Matthew Cieslak, Michael Hallquist, Miguel Molina-Romero, Murat Bilgel, Nat Lee, Raunak Jalan, Souheil Inati, Stephan Gerhard, Sulantha Mathotaarachchi, Victor Saase, Andrew N. Van, Christopher John Steele, Eduard Ort, Garikoitz Lerma-Usabiaga, Isaac Schwabacher, Jaime Arias, Jeff Lai, John Pellman, Jordi Huguet, Junhao WEN, Katrin Leinweber, Kshitij Chawla, Leon Weninger, Marc Modat, Robbert Harms, Sami Kristian Andberg, K. Matsubara, Abel A. González Orozco, Alexandre Routier, Ana Marina, Andrew Davison, Andrew Floren, Anne Park, Brian Cheung, Conor McDermottroe, Daniel C. McNamee, Dmitry Shachnev, Dorian Vogel, Guillaume Flandin, Henry Jones, Ivan Gonzalez, Jan Varada, Kai Schlamp, Kornelius Podranski, Lijie Huang, Maxime Noel, Nicolas Pannetier, Ole Numssen, Ranjeet Khanuja, Rinat Mukhometzianov, Sebastian Urchs, Thomas Nickson, William Broderick, Xihe Xie, Arielle Tambini, Paul Glad Mihai, Krzysztof J. Gorgolewski, Satrajit S. Ghosh:
nipy/nipype: 1.7.0. Zenodo, 2021 - 2020
- Gabriel A. Brat, Griffin M. Weber, Nils Gehlenborg, Paul Avillach, Nathan P. Palmer, Luca Chiovato, James J. Cimino, Lemuel R. Waitman, Gilbert S. Omenn, Alberto Malovini, Jason H. Moore, Brett K. Beaulieu-Jones, Valentina Tibollo, Shawn N. Murphy, Sehi L'Yi, Mark S. Keller, Riccardo Bellazzi, David A. Hanauer, Arnaud Serret-Larmande, Alba Gutiérrez-Sacristán, John J. Holmes, Douglas S. Bell, Kenneth D. Mandl, Robert W. Follett, Jeffrey G. Klann, Douglas A. Murad, Luigia Scudeller, Mauro Bucalo, Katie G. Kirchoff, Jean B. Craig, Jihad S. Obeid, Vianney Jouhet, Romain Griffier, Sébastien Cossin, Bertrand Moal, Lav P. Patel, Antonio Bellasi, Hans-Ulrich Prokosch, Detlef Kraska, Piotr Sliz, Amelia L. M. Tan, Kee Yuan Ngiam, Alberto Zambelli, Danielle L. Mowery, Emily Schriver, Batsal Devkota, Robert L. Bradford, Mohamad Daniar, Christel Daniel, Vincent Benoit, Romain Bey, Nicolas Paris, Patricia Serre, Nina Orlova, Julien Dubiel, Martin Hilka, Anne-Sophie Jannot, Stéphane Bréant, Judith Leblanc, Nicolas Griffon, Anita Burgun, Mélodie Bernaux, Arnaud Sandrin, Elisa Salamanca, Sylvie Cormont, Thomas Ganslandt, Tobias Gradinger, Julien Champ, Martin Boeker, Patricia Martel, Loic Esteve, Alexandre Gramfort, Olivier Grisel, Damien Leprovost, Thomas Moreau, Gaël Varoquaux, Jill-Jênn Vie, Demian Wassermann, Arthur Mensch, Charlotte Caucheteux, Christian Haverkamp, Guillaume Lemaitre, Silvano Bosari, Ian D. Krantz, Andrew M. South, Tianxi Cai, Isaac S. Kohane:
International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium. npj Digit. Medicine 3 (2020) - Ming Li, Brett D. Jones, Gaigai Cao, Dachao Wang:
The Effects of Edutainment Strategies on Student Motivation and Engagement in College EFL Classes. Trans. Edutainment 16: 3-12 (2020) - Mohammed Saqib, Yuanda Zhu, May D. Wang, Brett K. Beaulieu-Jones:
Regularization of Deep Neural Networks for EEG Seizure Detection to Mitigate Overfitting. COMPSAC 2020: 664-673 - William S. Bush, Nicholas Wheeler, Brett K. Beaulieu-Jones, Christian Darabos:
Packaging Biocomputing Software to Maximize Distribution and Reuse. PSB 2020: 739-742 - Shilpa Nadimpalli Kobren, Brett K. Beaulieu-Jones, Christian Darabos, Dokyoon Kim, Anurag Verma:
Session Introduction. PSB 2020: 286-294 - Nathaniel Wesley Filardo, Brett F. Gutstein, Jonathan Woodruff, Sam Ainsworth, Lucian Paul-Trifu, Brooks Davis, Hongyan Xia, Edward Tomasz Napierala, Alexander Richardson, John Baldwin, David Chisnall, Jessica Clarke, Khilan Gudka, Alexandre Joannou, A. Theodore Markettos, Alfredo Mazzinghi, Robert M. Norton, Michael Roe, Peter Sewell, Stacey D. Son, Timothy M. Jones, Simon W. Moore, Peter G. Neumann, Robert N. M. Watson:
Cornucopia: Temporal Safety for CHERI Heaps. SP 2020: 608-625 - Brittany Factura, Laura LaPerche, Phil Reyneri, Brett R. Jones, Kevin Karsch:
Lightform: Procedural Effects for Projected AR. CoRR abs/2001.00521 (2020) - Matthew B. A. McDermott, Emily Alsentzer, Samuel G. Finlayson, Michael Oberst, Fabian Falck, Tristan Naumann, Brett K. Beaulieu-Jones, Adrian V. Dalca:
ML4H Abstract Track 2019. CoRR abs/2002.01584 (2020) - 2019
- Adrian V. Dalca, Matthew B. A. McDermott, Emily Alsentzer, Samuel G. Finlayson, Michael Oberst, Fabian Falck, Corey Chivers, Andrew Beam, Tristan Naumann, Brett K. Beaulieu-Jones:
Machine Learning for Health ( ML4H ) 2019 : What Makes Machine Learning in Medicine Different? ML4H@NeurIPS 2019: 1-9 - Brett K. Beaulieu-Jones, Isaac S. Kohane, Andrew L. Beam:
Learning Contextual Hierarchical Structure of Medical Concepts with Poincairé Embeddings to Clarify Phenotypes. PSB 2019: 8-17
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