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ORCIDJournal of Integrative Bioinformatics, Volume 9
Volume 9, Number 1, 2012
- Dennis Trede, Jan Hendrik Kobarg, Janina Oetjen
, Herbert Thiele, Peter Maass, Theodore Alexandrov:
On the Importance of Mathematical Methods for Analysis of MALDI-Imaging Mass Spectrometry Data. - Ezio Bartocci, Diletta Cacciagrano, Maria Rita Di Berardini, Emanuela Merelli, Leonardo Vito:
UBioLab: a web-LABoratory for Ubiquitous in-silico experiments. - Jinlu Cai, Henry L. Keen, Curt D. Sigmund, Thomas L. Casavant:
Coex-Rank: An approach incorporating co-expression information for combined analysis of microarray data. - Hossein Rahmani, Hendrik Blockeel, Andreas Bender:
Predicting Genes Involved in Human Cancer Using Network Contextual Information.
Volume 9, Number 2, 2012
- Hendrik Mehlhorn, Matthias Lange, Uwe Scholz, Falk Schreiber:
IDPredictor: predict database links in biomedical database. - Christian Klukas, Jean-Michel Pape, Alexander Entzian:
Analysis of high-throughput plant image data with the information system IAP. - Jia Wei, Ming Chen:
Oncology In Vivo Data Integration for Hypothesis Generation. - Xiujun Gong, Hua Yu, Chun-Bai Yang, Yuan-Fang Li:
Knowledge Enrichment Analysis for Human Tissue-Specific Genes Uncover New Biological Insights. - Mohd Azrul Hisham Mohd Adib, Mohd Fadhlan Yusof, Zulkifli Ahmad, Nur Hazreen Mohd Hasni:
Detection of Cardiac Geometry via Difference Intensity of Echocardiogram Images. - Katrin Lotz, Falk Schreiber, Röbbe Wünschiers:
Nutrilyzer: A Tool for Deciphering Atomic Stoichiometry of Differentially Expressed Paralogous Proteins. - Peng Sun, Jiong Guo, Jan Baumbach:
Integrated simultaneous analysis of different biomedical data types with exact weighted bi-cluster editing. - Shikui Tu, Runsheng Chen, Lei Xu:
Transcription Network Analysis by A Sparse Binary Factor Analysis Algorithm. - Jie Cheng, Joel Greshock, Jeffery Painter, Xiwu Lin, Kwan Lee, Shu Zheng, Alan Menius:
Predicting breast cancer chemotherapeutic response using a novel tool for microarray data analysis. - Yuriy L. Orlov, Han Xu, Dmitry A. Afonnikov, Bing Lim, Jian-Chien Heng, Ping Yuan, Ming Chen, Junli Yan, Neil D. Clarke, Nina Orlova, Mikael Huss, Konstantin V. Gunbin, Nikolay Podkolodnyy, Huck-Hui Ng:
Computer and Statistical Analysis of Transcription Factor Binding and Chromatin Modifications by ChIP-seq data in Embryonic Stem Cell. - Keith Flanagan, Sirintra Nakjang, Jennifer Hallinan, Colin Harwood, Robert P. Hirt, Matthew R. Pocock, Anil Wipat:
Microbase2.0: A Generic Framework for Computationally Intensive Bioinformatics Workflows in the Cloud. - Xiaogang Wu, Hui Huang, Tao Wei, Ragini Pandey, Christoph Reinhard, Shuyu D. Li, Jake Y. Chen:
Network Expansion and Pathway Enrichment Analysis towards Biologically Significant Findings from Microarrays.
Volume 9, Number 3, 2012
- Diego Calvo-Dmgz, Juan F. Gálvez, Daniel Glez-Peña, Silvana Gómez Meire, Florentino Fdez-Riverola:
Using Variable Precision Rough Set for Selection and Classification of Biological Knowledge Integrated in DNA Gene Expression. - David Reboiro-Jato, Miguel Reboiro-Jato, Florentino Fdez-Riverola, Cristina P. Vieira, Nuno A. Fonseca, Jorge Vieira:
ADOPS - Automatic Detection Of Positively Selected Sites. - Paulo Gaspar, Jaime G. Carbonell, José Luís Oliveira:
On the parameter optimization of Support Vector Machines for binary classification. - Sara Correia, Miguel Rocha:
In silico strain optimization by adding reactions to metabolic models. - Ana Margarida Sousa, Andreia Ferreira, Nuno F. Azevedo, Maria Olívia Pereira, Anália Lourenço:
Computational approaches to standard-compliant biofilm data for reliable analysis and integration. - Augusto Ramoa, Salomé Maia, Anália Lourenço:
A Rational Framework for Production Decision Making in Blood Establishments. - Luis Fernando Castillo, Narmer Galeano-Vanegas, Gustavo A. Isaza, Álvaro Gaitán-Bustamante:
Construction of coffee transcriptome networks based on gene annotation semantics. - Roberto González, Carolina Zato, Rocío Benito, Javier Bajo, Jesús M. Hernández, Juan Francisco de Paz, Vicente Vera, Juan M. Corchado:
Automatic knowledge extraction in sequencing analysis with multiagent system and grid computing. - André Valério Carreiro, Artur J. Ferreira, Mário A. T. Figueiredo, Sara Cordeiro Madeira:
Towards a Classification Approach using Meta-Biclustering: Impact of Discretization in the Analysis of Expression Time Series.
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