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ORCIDJournal of Biomedical Semantics, Volume 10
Volume 10, Number 1, December 2019
- Rey-Long Liu:
Identification of conclusive association entities in biomedical articles. 1:1-1:20 - Billy Chiu
, Olga Majewska, Sampo Pyysalo, Laura Wey, Ulla Stenius, Anna Korhonen, Martha Palmer:
A neural classification method for supporting the creation of BioVerbNet. 2:1-2:12 - Kristina Doing-Harris, Bruce E. Bray, Anne Thackeray, Rashmee U. Shah, YiJun Shao, Yan Cheng, Qing Zeng-Treitler, Jennifer H. Garvin, Charlene R. Weir:
Development of a cardiac-centered frailty ontology. 3:1-3:16 - Lars Vogt:
Levels and building blocks - toward a domain granularity framework for the life sciences. 4:1-4:29 - Guillermo Vega-Gorgojo, Laura Slaughter, Martin Giese:
Seeing the whole picture: integrated pre-surgery reports with PreOptique. 5:1-5:15 - Mike Conway, Salomeh Keyhani, Lee M. Christensen, Brett R. South, Marzieh Vali, Louise C. Walter, Danielle L. Mowery, Samir E. AbdelRahman, Wendy W. Chapman:
Moonstone: a novel natural language processing system for inferring social risk from clinical narratives. 6:1-6:10 - André Sander, Roland Wauer:
Integrating terminologies into standard SQL: a new approach for research on routine data. 7:1-7:11 - Oscar Lithgow-Serrano, Socorro Gama-Castro, Cecilia Ishida-Gutiérrez, Citlalli Mejía-Almonte, Víctor H. Tierrafría, Sara Martínez-Luna, Alberto Santos-Zavaleta, David A. Velázquez-Ramírez, Julio Collado-Vides:
Similarity corpus on microbial transcriptional regulation. 8:1-8:14 - Alexandr Uciteli, Stefan Kropf, Timo Weiland, Stefanie Meese, Klaus Graef, Sabrina Rohrer, Marc O. Schurr, Wolfram Bartussek, Christoph Goller, Philipp Blohm, Robin Seidel, Christian Bayer, Manuel Kernenbach, Kathrin Pfeiffer, Wolfgang Lauer, Jörg-Uwe Meyer, Michael Witte, Heinrich Herre:
Ontology-based specification and generation of search queries for post-market surveillance. 9:1-9:13 - John S. Aberdeen, Samuel Bayer, Cheryl Clark, Meredith Keybl, David Tresner-Kirsch:
An annotation and modeling schema for prescription regimens. 10:1-10:11 - Lucy Lu Wang, G. Thomas Hayman, Jennifer R. Smith, Monika Tutaj, Mary Shimoyama, John H. Gennari:
Predicting instances of pathway ontology classes for pathway integration. 11:1-11:11 - Lars Vogt:
Organizing phenotypic data - a semantic data model for anatomy. 12:1-12:14 - Deborah A. Siegele, Sandra A. LaBonte, Peter I-Fan Wu, Marcus C. Chibucos, Suvarna Nandendla, Michelle G. Giglio, James C. Hu:
Phenotype annotation with the ontology of microbial phenotypes (OMP). 13:1-13:8 - Martijn G. Kersloot, Francis Y. Lau, Ameen Abu-Hanna, Derk L. Arts, Ronald Cornet:
Automated SNOMED CT concept and attribute relationship detection through a web-based implementation of cTAKES. 14:1-14:13 - Senay Kafkas, Robert Hoehndorf:
Ontology based mining of pathogen-disease associations from literature. 15:1-15:5 - Patryk Burek, Nico Scherf, Heinrich Herre:
Ontology patterns for the representation of quality changes of cells in time. 16:1-16:18 - Huaqin (Helen) Pan, Gail H. Deutsch, Susan E. Wert:
Comprehensive anatomic ontologies for lung development: A comparison of alveolar formation and maturation within mouse and human lung. 18:1-18:21 - Eben Holderness, Nicholas Miller, Philip Cawkwell, Kirsten Bolton, Marie Meteer, James Pustejovsky, Mei-Hua Hall:
Analysis of risk factor domains in psychosis patient health records. 19:1-19:10 - Hegler Tissot, Richard J. B. Dobson:
Combining string and phonetic similarity matching to identify misspelt names of drugs in medical records written in Portuguese. 17:1-17:7 - Anoop D. Shah, Emily Bailey, Tim Williams, Spiros C. Denaxas, Richard J. B. Dobson, Harry Hemingway:
Natural language processing for disease phenotyping in UK primary care records for research: a pilot study in myocardial infarction and death. 20:1-20:10 - Alicja Piotrkowicz, Owen A. Johnson, Geoff Hall:
Finding relevant free-text radiology reports at scale with IBM Watson Content Analytics: a feasibility study in the UK NHS. 21:1-21:9 - Mercedes Argüello Casteleiro, Robert Stevens, Jose Julio Des Diz, Chris Wroe, Maria Jesus Fernandez Prieto, Nava Maroto, Diego Maseda-Fernandez, George Demetriou, Simon Peters, Peter-J. Noble, Phil H. Jones, Jo Dukes-McEwan, Alan D. Radford, John A. Keane, Goran Nenadic:
Exploring semantic deep learning for building reliable and reusable one health knowledge from PubMed systematic reviews and veterinary clinical notes. 22:1-22:28 - Beatrice Alex, Claire Grover, Richard Tobin, Cathie Sudlow, Grant Mair, William Whiteley:
Text mining brain imaging reports. 23:1-23:11 - Irena Spasic, David Owen, Andrew P. Smith, Kate Button:
KLOSURE: Closing in on open-ended patient questionnaires with text mining. 24:1-24:11 - Yongqun He, Haihe Wang, Jie Zheng, Daniel P. Beiting, Anna Maria Masci, Hong Yu, Kaiyong Liu, Jianmin Wu, Jeffrey L. Curtis, Barry Smith, Alexander V. Alekseyenko, Jihad S. Obeid:
OHMI: the ontology of host-microbiome interactions. 25
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