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Journal of Integrative Bioinformatics, Volume 17
Volume 17, Number 1, March 2020
- P. V. Parvati Sai Arun
, Vineetha Yarlagadda
, Govindugari Vijaya Laxmi, Sumithra Salla:
Computational Analysis of the Hypothetical Protein P9303_05031 from Marine Cyanobacterium Prochlorococcus Marinus MIT 9303.
Volume 17, Number 1, April 2020
- Antonio J. Tomeu
, Alberto G. Salguero
:
A Lock Free Approach To Parallelize The Cellular Potts Model: Application To Ductal Carcinoma In Situ.
Volume 17, Number 1, May 2020
- Irene Martorelli, Leon S. Helwerda
, Jesse Kerkvliet, Sofia I. F. Gomes
, Jorinde Nuytinck, Chivany R. A. van der Werff, Guus J. Ramackers, Alexander P. Gultyaev, Vincent S. F. T. Merckx, Fons J. Verbeek:
Fungal metabarcoding data integration framework for the MycoDiversity DataBase (MDDB). - Mee K. Lee, Mohd Saberi Mohamad, Yee Wen Choon, Kauthar Mohd Daud
, Nurul Athirah Nasarudin, Mohd Arfian Ismail
, Zuwairie Ibrahim
, Suhaimi Napis, Richard O. Sinnott:
Comparison of Optimization-Modelling Methods for Metabolites Production in Escherichia coli. - Vânia Rodrigues, Sérgio A. D. Deusdado
:
Metalearning approach for leukemia informative genes prioritization.
Volume 17, Numbers 2-3, June 2020
- Maxwell Lewis Neal
, John H. Gennari
, Dagmar Waltemath
, David P. Nickerson
, Matthias König
:
Open modeling and exchange (OMEX) metadata specification version 1.0. - Hasan Baig
, Pedro Fontanarrosa
, Vishwesh Kulkarni
, James Alastair McLaughlin
, Prashant Vaidyanathan
, Bryan Bartley
, Jacob Beal
, Matthew Crowther, Thomas E. Gorochowski
, Raik Grünberg
, Goksel Misirli
, James Scott-Brown
, Ernst Oberortner
, Anil Wipat
, Chris J. Myers
:
Synthetic biology open language (SBOL) version 3.0.0.
Volume 17, Numbers 2-3, July 2020
- Fengkai Zhang
, Lucian P. Smith
, Michael L. Blinov
, James R. Faeder
, William S. Hlavacek
, José Juan Tapia
, Sarah M. Keating
, Nicolas Rodriguez
, Andreas Dräger
, Leonard A. Harris
, Andrew Finney, Bin Hu
, Michael Hucka
, Martin Meier-Schellersheim
:
Systems biology markup language (SBML) level 3 package: multistate, multicomponent and multicompartment species, version 1, release 2.
Volume 17, Numbers 2-3, June 2020
- Dagmar Waltemath
, Martin Golebiewski
, Michael L. Blinov
, Padraig Gleeson
, Henning Hermjakob
, Michael Hucka
, Esther Thea Inau
, Sarah M. Keating
, Matthias König
, Olga Krebs
, Rahuman S. Malik-Sheriff
, David P. Nickerson
, Ernst Oberortner, Herbert M. Sauro
, Falk Schreiber, Lucian P. Smith
, Melanie I. Stefan
, Ulrike Wittig
, Chris J. Myers
:
The first 10 years of the international coordination network for standards in systems and synthetic biology (COMBINE). - Frank T. Bergmann
, Tobias Czauderna
, Ugur Dogrusoz
, Adrien Rougny
, Andreas Dräger
, Vasundra Touré
, Alexander Mazein
, Michael L. Blinov
, Augustin Luna
:
Systems biology graphical notation markup language (SBGNML) version 0.3. - Hasan Baig
, Pedro Fontanarrosa
, Vishwesh Kulkarni, James Alastair McLaughlin, Prashant Vaidyanathan
, Bryan Bartley, Swapnil Bhatia, Shyam Bhakta, Michael Bissell, Kevin Clancy, Robert Sidney Cox III, Ángel Goñi-Moreno
, Thomas E. Gorochowski, Raik Grünberg
, Augustin Luna, Curtis Madsen, Goksel Misirli, Tramy Nguyen, Nicolas Le Novère, Zachary Palchick, Matthew R. Pocock, Nicholas Roehner, Herbert M. Sauro, James Scott-Brown, John T. Sexton, Guy-Bart Stan, Jeffrey J. Tabor, Marta Vazquez Vilar
, Christopher A. Voigt, Anil Wipat, David Zong
, Zach Zundel, Jacob Beal
, Chris J. Myers:
Synthetic biology open language visual (SBOL visual) version 2.2. - Falk Schreiber, Björn Sommer, Tobias Czauderna
, Martin Golebiewski, Thomas E. Gorochowski, Michael Hucka
, Sarah M. Keating
, Matthias König, Chris J. Myers, David P. Nickerson
, Dagmar Waltemath
:
Specifications of standards in systems and synthetic biology: status and developments in 2020.
Volume 17, Numbers 2-3, July 2020
- Lucian P. Smith
, Stuart L. Moodie
, Frank T. Bergmann
, Colin S. Gillespie
, Sarah M. Keating
, Matthias König
, Chris J. Myers
, Maciek J. Swat, Darren J. Wilkinson
, Michael Hucka
:
Systems Biology Markup Language (SBML) Level 3 Package: Distributions, Version 1, Release 1. - Søren Brunak, Catherine Bjerre Collin, Katharina Eva Ó Cathaoir
, Martin Golebiewski, Marc Kirschner, Ingrid Kockum
, Heike Moser, Dagmar Waltemath:
Towards standardization guidelines for in silico approaches in personalized medicine. - Michael Clerx
, Michael T. Cooling
, Jonathan Cooper
, Alan Garny
, Keri R. Moyle
, David P. Nickerson
, Poul M. F. Nielsen
, Hugh Sorby
:
CellML 2.0.
Volume 17, Number 4, December 2020
- Anastasiya Kobelyatskaya
, Elena A. Pudova, Maria Fedorova, Kirill Nyushko, Boris Alekseev, Andrey Kaprin, Dmitry Trofimov
, Gennady Sukhikh, Anastasiya V. Snezhkina, George S. Krasnov, Sergey Razin, Anna V. Kudryavtseva:
Differentially methylated CpG sites associated with the high-risk group of prostate cancer. - Anton Bogomolov, Alexander Osadchuk, Ludmila Osadchuk:
Reproductive potential of the male (RPM): the computer database of phenotypic and molecular genetic data for Russian men with impaired and normal fertility. - Yuriy L. Orlov, Oxana B. Dobrovolskaya, Ming Chen
, Ralf Hofestädt:
Bioinformatics of genome regulation and structure - 2020 papers collection. - Vladimir Kalinin:
Cell - extracellular matrix interaction in glioma growth. In silico model.
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