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SIAM Journal on Scientific Computing, Volume 38
Volume 38, Number 1, 2016
- Liqian Peng, Kamran Mohseni:
Symplectic Model Reduction of Hamiltonian Systems. - Jie Shen
, Yingwei Wang, Jianlin Xia:
Fast Structured Direct Spectral Methods for Differential Equations with Variable Coefficients, I. The One-Dimensional Case. - Lina Meinecke, Stefan Engblom
, Andreas Hellander
, Per Lötstedt:
Analysis and Design of Jump Coefficients in Discrete Stochastic Diffusion Models. - Mathea J. Vuik, Jennifer K. Ryan:
Automated Parameters for Troubled-Cell Indicators Using Outlier Detection. - Ruihan Guo, Yan Xu
:
Local Discontinuous Galerkin Method and High Order Semi-Implicit Scheme for the Phase Field Crystal Equation. - Michal Kocvara
, Daniel Loghin, James Turner:
Constraint Interface Preconditioning for Topology Optimization Problems. - Bangti Jin, Raytcho D. Lazarov
, Zhi Zhou
:
Two Fully Discrete Schemes for Fractional Diffusion and Diffusion-Wave Equations with Nonsmooth Data. - Olivier Bokanowski, Maurizio Falcone
, Smita Sahu
:
An Efficient Filtered Scheme for Some First Order Time-Dependent Hamilton-Jacobi Equations. - Samuel Herrmann
, Etienne Tanré
:
The First-passage Time of the Brownian Motion to a Curved Boundary: an Algorithmic Approach. - Roman Andreev:
Wavelet-In-Time Multigrid-In-Space Preconditioning of Parabolic Evolution Equations. - Alen Alexanderian
, Noemi Petra, Georg Stadler, Omar Ghattas:
A Fast and Scalable Method for A-Optimal Design of Experiments for Infinite-dimensional Bayesian Nonlinear Inverse Problems. - Yinnian He, Yan Zhang, Hui Xu
, Zhangxin Chen
:
First-Order Decoupled Finite Element Method of the three-Dimensional Primitive Equations of the Ocean. - Kirk M. Soodhalter
:
Block Krylov Subspace Recycling for Shifted Systems with Unrelated Right-Hand Sides. - Jennifer Pestana
, Richard L. Muddle, Matthias Heil, Françoise Tisseur
, Milan D. Mihajlovic:
Efficient Block Preconditioning for a C1 Finite Element Discretization of the Dirichlet Biharmonic Problem. - Christoph Ortner
, Lei Zhang
:
Atomistic/Continuum Blending with Ghost Force Correction. - Håkan T. Johansson
, Christian Forssén
:
Fast and Accurate Evaluation of Wigner 3j, 6j, and 9j Symbols Using Prime Factorization and Multiword Integer Arithmetic. - Yeonjong Shin, Dongbin Xiu:
Nonadaptive Quasi-Optimal Points Selection for Least Squares Linear Regression. - Laurent Gosse
, Nicolas Vauchelet
:
Numerical High-Field Limits in Two-Stream Kinetic Models and 1D Aggregation Equations. - Andreas Karageorghis
, C. S. Chen, Xiao-Yan Liu:
Kansa-RBF Algorithms for Elliptic Problems in Axisymmetric Domains. - Peter Benner
, Patrick Kürschner
, Jens Saak
:
Frequency-Limited Balanced Truncation with Low-Rank Approximations. - Eugene Vecharynski, Chao Yang, Fei Xue:
Generalized Preconditioned Locally Harmonic Residual Method for Non-Hermitian Eigenproblems. - Lei Zhang, Qiang Du
, Zhenzhen Zheng:
Optimization-based Shrinking Dimer Method for Finding Transition States. - Bernardo Cockburn
, Jiguang Shen:
A Hybridizable Discontinuous Galerkin Method for the p-Laplacian. - Miroslav Bacák, Ronny Bergmann
, Gabriele Steidl, Andreas Weinmann:
A Second Order Nonsmooth Variational Model for Restoring Manifold-Valued Images. - Xuan Zhao, Zhimin Zhang:
Superconvergence Points of Fractional Spectral Interpolation. - Martin Storath
, Andreas Weinmann, Michael Unser
:
Exact Algorithms for L1-TV Regularization of Real-Valued or Circle-Valued Signals.
- James H. Adler
, Thomas R. Benson, Eric C. Cyr
, Scott P. MacLachlan, Raymond S. Tuminaro:
Monolithic Multigrid Methods for Two-Dimensional Resistive Magnetohydrodynamics. - Francesca Arrigo
, Michele Benzi
:
Updating and Downdating Techniques for Optimizing Network Communicability. - James H. Adler
, David B. Emerson
, Scott P. MacLachlan, Thomas A. Manteuffel:
Constrained Optimization for Liquid Crystal Equilibria. - Janne M. J. Huttunen
, Mikael J. Turunen
, Juuso T. J. Honkanen
, Juha Töyräs
, Jukka S. Jurvelin:
Estimation of Systematic and Spatially Correlated Components of Random Signals from Repeated Measurements: Application to Contrast Enhanced Computer Tomography Measurements. - Shuai Xue, Hyun-Kyung Lim, James Glimm, Flavio H. Fenton, Elizabeth M. Cherry:
Sharp Boundary Electrocardiac Simulations. - Luis Ortiz-Gracia, Cornelis W. Oosterlee
:
A Highly Efficient Shannon Wavelet Inverse Fourier Technique for Pricing European Options. - Simon L. Cotter
, Radek Erban:
Error Analysis of Diffusion Approximation Methods for Multiscale Systems in Reaction Kinetics. - Yuantao Cai, Marco Donatelli
, Davide Bianchi
, Ting-Zhu Huang:
Regularization Preconditioners for Frame-Based Image Deblurring with Reduced Boundary Artifacts.
- Nicolas Bock, Matt Challacombe, Laxmikant V. Kalé:
Solvers for O (N) Electronic Structure in the Strong Scaling Limit. - Santiago Badia
, Alberto F. Martín
, Javier Principe
:
Multilevel Balancing Domain Decomposition at Extreme Scales. - Massimo Bernaschi, Mauro Bisson, Carlo Fantozzi
, Carlo Janna:
A Factored Sparse Approximate Inverse Preconditioned Conjugate Gradient Solver on Graphics Processing Units.
Volume 38, Number 2, 2016
- Zlatko Drmac
, Serkan Gugercin
:
A New Selection Operator for the Discrete Empirical Interpolation Method - Improved A Priori Error Bound and Extensions. - Matthias Bolten
, Karsten Kahl, Sonja Sokolovic:
Multigrid Methods for Tensor Structured Markov Chains with Low Rank Approximation. - Prince Chidyagwai
, Scott Ladenheim, Daniel B. Szyld:
Constraint Preconditioning for the Coupled Stokes-Darcy System. - Wai-Sun Don, Zhen Gao, Peng Li, Xiao Wen:
Hybrid Compact-WENO Finite Difference Scheme with Conjugate Fourier Shock Detection Algorithm for Hyperbolic Conservation Laws. - Benedict J. Leimkuhler, Xiaocheng Shang
:
Adaptive Thermostats for Noisy Gradient Systems. - Nicolas Crouseilles, Hélène Hivert, Mohammed Lemou:
Numerical Schemes for Kinetic Equations in the Anomalous Diffusion Limit. Part I: The Case of Heavy-Tailed Equilibrium. - Bor Plestenjak, Michiel E. Hochstenbach
:
Roots of Bivariate Polynomial Systems via Determinantal Representations. - Xianyi Zeng
:
A General Approach to Enhance Slope Limiters in MUSCL Schemes on Nonuniform Rectilinear Grids. - Fei Liu, Lexing Ying:
Recursive Sweeping Preconditioner for the Three-Dimensional Helmholtz Equation. - Chris J. Vogl:
A Curvature-Augmented, REA Approach to the Level Set Method. - Peipei Lu, Xuejun Xu:
A Robust Multilevel Method for the Time-harmonic Maxwell Equation with High Wave Number. - Johannes K. Kraus, Raytcho D. Lazarov
, Maria Lymbery, Svetozar Margenov, Ludmil T. Zikatanov
:
Preconditioning Heterogeneous H(div) Problems by Additive Schur Complement Approximation and Applications. - Roel Matthysen, Daan Huybrechs:
Fast Algorithms for the Computation of Fourier Extensions of Arbitrary Length. - Jeremy E. Kozdon
, Lucas C. Wilcox:
Stable Coupling of Nonconforming, High-Order Finite Difference Methods. - David Cohen
, Olivier Verdier
:
MultiSymplectic Discretization of Wave Map Equations. - Xue Jiang, Peijun Li, Weiying Zheng:
Eddy Current Model for Nondestructive Evaluation with Thin Cracks. - Hans De Sterck
, Alexander J. M. Howse:
Nonlinearly Preconditioned Optimization on Grassmann Manifolds for Computing Approximate Tucker Tensor Decompositions. - Matthias Kirchhart
, Sven Groß
, Arnold Reusken:
Analysis of an XFEM Discretization for Stokes Interface Problems. - Olivier Zahm
, Anthony Nouy:
Interpolation of Inverse Operators for Preconditioning Parameter-Dependent Equations. - Milana Gataric
, Clarice Poon:
A Practical Guide to the Recovery of Wavelet Coefficients from Fourier Measurements. - Amir Averbuch, Gil Shabat, Yoel Shkolnisky:
Direct Inversion of the Three-Dimensional Pseudo-polar Fourier Transform. - Sara N. Pollock
:
An Improved Method for Solving Quasi-linear Convection Diffusion Problems on a Coarse Mesh. - Jesse Chan
, Timothy C. Warburton
:
Orthogonal Bases for Vertex-Mapped Pyramids. - Kenneth Duru
:
The Role of Numerical Boundary Procedures in the Stability of Perfectly Matched Layers. - Roland Glowinski, Shingyu Leung
, Jianliang Qian:
Operator-Splitting Based Fast Sweeping Methods for Isotropic Wave Propagation in a Moving Fluid. - Leevan Ling
:
A Fast Block-Greedy Algorithm for Quasi-optimal Meshless Trial Subspace Selection.
- Tsung-Ming Huang, Wen-Wei Lin, Volker Mehrmann:
A Newton-Type Method with Nonequivalence Deflation for Nonlinear Eigenvalue Problems Arising in Photonic Crystal Modeling. - Olivier Bodart
, Valérie Cayol
, Sébastien Court, Jonas Koko:
XFEM-Based Fictitious Domain Method for Linear Elasticity Model with Crack. - Ngoc Cuong Nguyen, Han Men, Robert M. Freund, Jaume Peraire:
Functional Regression for State Prediction Using Linear PDE Models and Observations. - Michael A. Hansen, James C. Sutherland:
Pseudotransient Continuation for Combustion Simulation with Detailed Reaction Mechanisms. - David Amsallem, Jan Nordström
:
Energy Stable Model Reduction of Neurons by Nonnegative Discrete Empirical Interpolation. - Kazufumi Ito, A. K. Landi:
The Nonnegative Matrix Factorization: Regularization and Complexity.
- Fande Kong, Xiao-Chuan Cai:
A Highly Scalable Multilevel Schwarz Method with Boundary Geometry Preserving Coarse Spaces for 3D Elasticity Problems on Domains with Complex Geometry. - Florian Schornbaum, Ulrich Rüde
:
Massively Parallel Algorithms for the Lattice Boltzmann Method on NonUniform Grids.
Volume 38, Number 3, 2016
- Kody J. H. Law, Hamidou Tembine
, Raúl Tempone
:
Deterministic Mean-Field Ensemble Kalman Filtering. - Mounir Bennoune, Jérôme Morin-Drouin, Robert G. Owens:
On the Jump Conditions for an Immersed Interface Method. - Alastair Gregory, Colin J. Cotter, Sebastian Reich:
Multilevel Ensemble Transform Particle Filtering. - Huadong Gao
, Weiwei Sun
:
A New Mixed Formulation and Efficient Numerical Solution of Ginzburg-Landau Equations Under the Temporal Gauge. - James Vogel, Jianlin Xia
, Stephen Cauley, Venkataramanan Balakrishnan
:
Superfast Divide-and-Conquer Method and Perturbation Analysis for Structured Eigenvalue Solutions. - Yidu Yang, Hai Bi, Hao Li, Jiayu Han:
Mixed Methods for the Helmholtz Transmission Eigenvalues. - Sanghyun Lee
, Young-Ju Lee, Mary F. Wheeler:
A Locally Conservative Enriched Galerkin Approximation and Efficient Solver for Elliptic and Parabolic Problems. - Hong Zhang, Adrian Sandu, Sébastien Blaise:
High Order Implicit-explicit General Linear Methods with Optimized Stability Regions. - Danny C. Sorensen, Mark Embree:
A DEIM Induced CUR Factorization. - Orazio Muscato, Wolfgang Wagner:
A Class of Stochastic Algorithms for the Wigner Equation. - Daniele Boffi, Michele Botti
, Daniele A. Di Pietro
:
A Nonconforming High-Order Method for the Biot Problem on General Meshes. - Natalie N. Beams
, Luke N. Olson, Jonathan B. Freund:
A Finite Element Based P3M Method for N-Body Problems. - Jan Nordström
, Tomas Lundquist:
Summation-By-Parts in Time: The Second Derivative. - Dante Kalise
, Axel Kröner, Karl Kunisch:
Local Minimization Algorithms for Dynamic Programming Equations. - Michael P. Friedlander, Ives Macêdo
:
Low-Rank Spectral Optimization via Gauge Duality. - Marco Caliari, Peter Kandolf
, Alexander Ostermann
, Stefan Rainer:
The Leja Method Revisited: Backward Error Analysis for the Matrix Exponential. - Nicola Guglielmi:
On the Method by Rostami for Computing the Real Stability Radius of Large and Sparse Matrices. - Mark Ainsworth, Manuel A. Sánchez:
Computing the Bézier Control Points of the Lagrangian Interpolant in Arbitrary Dimension. - Jizu Huang, Chao Yang
, Xiao-Chuan Cai:
A Nonlinearly Preconditioned Inexact Newton Algorithm for Steady State Lattice Boltzmann Equations. - Sheng-Gwo Chen, Jyh-Yang Wu:
Discrete Conservation Laws on Evolving Surfaces. - Andreas Rademacher
:
NCP Function-Based Dual Weighted Residual Error Estimators for Signorini's Problem. - Sivaram Ambikasaran
, Carlos Borges
, Lise-Marie Imbert-Gérard, Leslie Greengard
:
Fast, Adaptive, High-Order Accurate Discretization of the Lippmann-Schwinger Equation in Two Dimensions. - M. Ableidinger, Evelyn Buckwar
:
Splitting Integrators for the Stochastic Landau-Lifshitz Equation. - Jirí Kopal, Miroslav Rozlozník
, Miroslav Tuma
:
Factorized Approximate Inverses with Adaptive Dropping. - Anaïs Crestetto, Fabrice Deluzet, Claudia Negulescu:
A Hybrid Method for Anisotropic Elliptic Problems Based on the Coupling of an Asymptotic-Preserving Method with the Asymptotic Limit Model. - Debojyoti Ghosh
, Emil M. Constantinescu
:
Semi-implicit Time Integration of Atmospheric Flows with Characteristic-Based Flux Partitioning. - Yu-Wen Li
, Xinyuan Wu:
Exponential Integrators Preserving First Integrals or Lyapunov Functions for Conservative or Dissipative Systems. - Nicole Spillane:
An Adaptive MultiPreconditioned Conjugate Gradient Algorithm.
- Mauricio J. Del Razo
, Yoichi Morofuji
, James S. Meabon, B. Russell Huber, Elaine R. Peskind, William A. Banks, Pierre D. Mourad, Randall J. LeVeque, David G. Cook:
Computational and In Vitro Studies of Blast-Induced Blood-Brain Barrier Disruption. - Zecheng Gan
, Shidong Jiang
, Erik Luijten, Zhenli Xu:
A Hybrid Method for Systems of Closely Spaced Dielectric Spheres and Ions. - Marylesa Howard, Michael Fowler, Aaron Luttman
, Stephen E. Mitchell, Margaret C. Hock
:
Bayesian Abel Inversion in Quantitative X-Ray Radiography. - Xiaowei Zhang, Li Cheng, Delin Chu, Li-Zhi Liao, Michael K. Ng, Roger C. E. Tan:
Incremental Regularized Least Squares for Dimensionality Reduction of Large-Scale Data. - Antti H. Niemi
:
Benchmark Computations of Stresses in a Spherical Dome with Shell Finite Elements. - Kailiang Wu
, Huazhong Tang:
A Direct Eulerian GRP Scheme for Spherically Symmetric General Relativistic Hydrodynamics.
- Megan E. Farquhar
, Timothy J. Moroney
, Qianqian Yang
, Ian W. Turner
:
GPU Accelerated Algorithms for Computing Matrix Function Vector Products with Applications to Exponential Integrators and Fractional Diffusion. - Jack Lee
, Andrew N. Cookson
, Ishani Roy, Eric Kerfoot
, Liya Asner, G. Vigueras, T. Sochi, Simone Deparis
, Christian Michler, Nicolas P. Smith, David A. Nordsletten
:
Multiphysics Computational Modeling in CHeart. - Brian Drawert, Michael Trogdon, Salman Zubair Toor, Linda R. Petzold, Andreas Hellander
:
MOLNs: A Cloud Platform for Interactive, Reproducible, and Scalable Spatial Stochastic Computational Experiments in Systems Biology Using PyURDME. - Grey Ballard
, Christopher M. Siefert, Jonathan J. Hu:
Reducing Communication Costs for Sparse Matrix Multiplication within Algebraic Multigrid. - Guillaume Aupy, Julien Herrmann, Paul D. Hovland
, Yves Robert:
Optimal Multistage Algorithm for Adjoint Computation. - Emmanuel Agullo, Patrick R. Amestoy, Alfredo Buttari
, Abdou Guermouche, Jean-Yves L'Excellent, François-Henry Rouet:
Robust Memory-Aware Mappings for Parallel Multifrontal Factorizations. - Amir Gholami, Dhairya Malhotra, Hari Sundar, George Biros:
FFT, FMM, or Multigrid? A comparative Study of State-Of-the-Art Poisson Solvers for Uniform and Nonuniform Grids in the Unit Cube. - Rolf Krause, Patrick Zulian
:
A Parallel Approach to the Variational Transfer of Discrete Fields between Arbitrarily Distributed Unstructured Finite Element Meshes.
Volume 38, Number 4, 2016
- Hailiang Liu, Yulong Xing:
An Invariant Preserving Discontinuous Galerkin Method for the Camassa-Holm Equation. - Jason E. Hicken, David C. Del Rey Fernández
, David W. Zingg:
Multidimensional Summation-by-Parts Operators: General Theory and Application to Simplex Elements. - Per-Gunnar Martinsson:
Compressing Rank-Structured Matrices via Randomized Sampling. - Youngsoo Ha, Changho Kim, Hyoseon Yang
, Jungho Yoon:
Sixth-order Weighted Essentially Nonoscillatory Schemes Based on Exponential Polynomials. - Daniel Kressner, Michael Steinlechner, Bart Vandereycken:
Preconditioned Low-rank Riemannian Optimization for Linear Systems with Tensor Product Structure. - Jonas Ballani, Daniel Kressner:
Reduced Basis Methods: From Low-Rank Matrices to Low-Rank Tensors. - Moritz Schulze Darup
, Martin Mönnigmann
:
Improved Automatic Computation of Hessian Matrix Spectral Bounds. - Alvaro Moraes, Raúl Tempone
, Pedro Vilanova
:
A Multilevel Adaptive Reaction-splitting Simulation Method for Stochastic Reaction Networks. - Alexei Bespalov
, David J. Silvester
:
Efficient Adaptive Stochastic Galerkin Methods for Parametric Operator Equations. - Julian Becerra-Sagredo, Carlos Málaga
, Francisco Mandujano:
Moments Preserving and high-resolution Semi-Lagrangian Advection Scheme. - Jesse Chan
, Tim Warburton
:
A Short Note on a Bernstein-Bezier Basis for the Pyramid. - Martin J. Gander, Martin Neumüller:
Analysis of a New Space-Time Parallel Multigrid Algorithm for Parabolic Problems. - Andrea Barth, Franz G. Fuchs
:
Uncertainty Quantification for Hyperbolic Conservation Laws with Flux Coefficients Given by Spatiotemporal Random Fields.