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ORCIDHenkjan J. Huisman
- > Home > Persons > Henkjan J. Huisman
Publications
- 2024
[i16]Alessa Hering, Sarah de Boer, Anindo Saha, Jasper J. Twilt, Derya Yakar, Maarten de Rooij, Henkjan Huisman, Joeran S. Bosma:
Deformable MRI Sequence Registration for AI-based Prostate Cancer Diagnosis. CoRR abs/2404.09666 (2024)- [i15]Hongwei Bran Li, Fernando Navarro, Ivan Ezhov, Amirhossein Bayat, Dhritiman Das, Florian Kofler, Suprosanna Shit, Diana Waldmannstetter, Johannes C. Paetzold, Xiaobin Hu, Benedikt Wiestler, Lucas Zimmer, Tamaz Amiranashvili, Chinmay Prabhakar, Christoph Berger, Jonas Weidner, Michelle Alonso-Basanta, Arif Rashid, Ujjwal Baid, Wesam Adel, Deniz Alis, Bhakti Baheti, Yingbin Bai, Ishaan Bhat, Sabri Can Cetindag, Wenting Chen, Li Cheng, Prasad Dutande, Lara Dular, Mustafa A. Elattar, Ming Feng, Shengbo Gao, Henkjan Huisman, Weifeng Hu, Shubham Innani, Wei Jiat, Davood Karimi, Hugo J. Kuijf, Jin Tae Kwak, Hoang Long Le, Xiang Lia, Huiyan Lin, Tongliang Liu, Jun Ma, Kai Ma, Ting Ma, Ilkay Öksüz, Robbie Holland, Arlindo L. Oliveira, Jimut Bahan Pal, Xuan Pei, Maoying Qiao, Anindo Saha, Raghavendra Selvan, Linlin Shen, João Lourenço Silva, Ziga Spiclin, Sanjay N. Talbar, Dadong Wang, Wei Wang, Xiong Wang, Yin Wang, Ruiling Xia, Kele Xu, Yanwu Yan, Mert Yergin, Shuang Yu, Lingxi Zeng, YingLin Zhang, Jiachen Zhao, Yefeng Zheng, Martin Zukovec, Richard K. G. Do, Anton S. Becker, Amber L. Simpson, Ender Konukoglu, András Jakab, Spyridon Bakas, Leo Joskowicz, Bjoern H. Menze:
QUBIQ: Uncertainty Quantification for Biomedical Image Segmentation Challenge. CoRR abs/2405.18435 (2024) - 2023
- [j13]Bram De Wilde
, Frank Joosten, Wulphert Venderink, Mirjam E. J. Davidse, Juliëtte Geurts, Hanneke Kruijt, Afke Vermeulen, Bibi Martens, Maxime V. P. Schyns, Josephine C. B. M. Huige, Myrte C. de Boer, Bart A. R. Tonino, Herman J. A. Zandvoort, Kirsti Lammert, Helka Parviainen, Aino-Maija Vuorinen, Suvi Syväranta, Ruben R. M. Vogels, Wiesje Prins, Andrea Coppola, Nancy Bossa, Richard P. G. ten Broek, Henkjan Huisman:
Inter- and Intra-Observer Variability and the Effect of Experience in Cine-MRI for Adhesion Detection. J. Imaging 9(3): 55 (2023) - [j12]Bastiaan A. W. van den Beukel, Bram De Wilde, Frank Joosten, Harry van Goor, Wulphert Venderink, Henkjan J. Huisman, Richard P. G. ten Broek:
Quantifiable Measures of Abdominal Wall Motion for Quality Assessment of Cine-MRI Slices in Detection of Abdominal Adhesions. J. Imaging 9(5): 92 (2023) - [j11]Yiwen Li, Yunguan Fu, Iani J. M. B. Gayo, Qianye Yang, Zhe Min, Shaheer U. Saeed, Wen Yan, Yipei Wang, J. Alison Noble, Mark Emberton, Matthew J. Clarkson, Henkjan Huisman, Dean C. Barratt, Victor Adrian Prisacariu, Yipeng Hu:
Prototypical few-shot segmentation for cross-institution male pelvic structures with spatial registration. Medical Image Anal. 90: 102935 (2023) - [c28]Joeran Bosma, Dre Peeters, Natália Alves, Anindo Saha, Zaigham Saghir, Colin Jacobs, Henkjan Huisman:
Reproducibility of Training Deep Learning Models for Medical Image Analysis. MIDL 2023: 1269-1287 - [i14]Bram De Wilde, Anindo Saha, Richard P. G. ten Broek, Henkjan Huisman:
Medical diffusion on a budget: textual inversion for medical image generation. CoRR abs/2303.13430 (2023) - [i13]Matin Hosseinzadeh, Anindo Saha, Joeran Bosma, Henkjan Huisman:
Uncertainty-Aware Semi-Supervised Learning for Prostate MRI Zonal Segmentation. CoRR abs/2305.05984 (2023) - 2022
- [c27]Yiwen Li, Yunguan Fu, Qianye Yang, Zhe Min, Wen Yan, Henkjan J. Huisman, Dean C. Barratt, Victor Adrian Prisacariu, Yipeng Hu:
FEW-SHOT Image Segmentation for Cross-Institution Male Pelvic Organs Using Registration-Assisted Prototypical Learning. ISBI 2022: 1-5 - [d1]Yiwen Li, Yunguan Fu, Iani J. M. B. Gayo, Qianye Yang, Zhe Min, Shaheer U. Saeed, Wen Yan, Yipei Wang, J. Alison Noble, Mark Emberton, Matthew J. Clarkson, Henkjan Huisman, Dean C. Barratt, Victor A. Prisacariu, Yipeng Hu:
Cross-institution Male Pelvic Structures. Zenodo, 2022
- [i12]Yiwen Li, Yunguan Fu, Qianye Yang, Zhe Min, Wen Yan, Henkjan J. Huisman, Dean C. Barratt, Victor Adrian Prisacariu, Yipeng Hu:
Few-shot image segmentation for cross-institution male pelvic organs using registration-assisted prototypical learning. CoRR abs/2201.06358 (2022) - [i11]Yiwen Li, Yunguan Fu, Iani J. M. B. Gayo, Qianye Yang, Zhe Min, Shaheer U. Saeed, Wen Yan, Yipei Wang, J. Alison Noble, Mark Emberton, Matthew J. Clarkson, Henkjan J. Huisman, Dean C. Barratt, Victor Adrian Prisacariu, Yipeng Hu:
Prototypical few-shot segmentation for cross-institution male pelvic structures with spatial registration. CoRR abs/2209.05160 (2022) - 2021
- [j10]Anindo Saha, Matin Hosseinzadeh, Henkjan J. Huisman:
End-to-end prostate cancer detection in bpMRI via 3D CNNs: Effects of attention mechanisms, clinical priori and decoupled false positive reduction. Medical Image Anal. 73: 102155 (2021) - [j9]Alberto Rossi, Matin Hosseinzadeh, Monica Bianchini, Franco Scarselli, Henkjan J. Huisman:
Multi-Modal Siamese Network for Diagnostically Similar Lesion Retrieval in Prostate MRI. IEEE Trans. Medical Imaging 40(3): 986-995 (2021) - [i10]Anindo Saha, Matin Hosseinzadeh, Henkjan J. Huisman:
End-to-end Prostate Cancer Detection in bpMRI via 3D CNNs: Effect of Attention Mechanisms, Clinical Priori and Decoupled False Positive Reduction. CoRR abs/2101.03244 (2021) - [i9]Michela Antonelli, Annika Reinke, Spyridon Bakas, Keyvan Farahani, Annette Kopp-Schneider, Bennett A. Landman, Geert Litjens, Bjoern H. Menze, Olaf Ronneberger, Ronald M. Summers, Bram van Ginneken, Michel Bilello, Patrick Bilic, Patrick Ferdinand Christ, Richard K. G. Do, Marc Gollub, Stephan Heckers, Henkjan J. Huisman, William R. Jarnagin, Maureen McHugo, Sandy Napel, Jennifer Goli-Pernicka, Kawal S. Rhode, Catalina Tobon-Gomez, Eugene Vorontsov, James A. Meakin, Sébastien Ourselin, Manuel Wiesenfarth, Pablo Arbeláez, Byeonguk Bae, Sihong Chen, Laura Alexandra Daza, Jianjiang Feng, Baochun He, Fabian Isensee, Yuanfeng Ji, Fucang Jia, Namkug Kim, Ildoo Kim, Dorit Merhof, Akshay Pai, BeomHee Park, Mathias Perslev, Ramin Rezaiifar, Oliver Rippel, Ignacio Sarasua, Wei Shen, Jaemin Son, Christian Wachinger, Liansheng Wang, Yan Wang, Yingda Xia, Daguang Xu, Zhanwei Xu, Yefeng Zheng, Amber L. Simpson, Lena Maier-Hein, M. Jorge Cardoso:
The Medical Segmentation Decathlon. CoRR abs/2106.05735 (2021) - [i8]Bram De Wilde, Richard P. G. ten Broek, Henkjan J. Huisman:
Cine-MRI detection of abdominal adhesions with spatio-temporal deep learning. CoRR abs/2106.08094 (2021) - [i7]Anindo Saha, Joeran Bosma, Jasper Linmans, Matin Hosseinzadeh, Henkjan J. Huisman:
Anatomical and Diagnostic Bayesian Segmentation in Prostate MRI - Should Different Clinical Objectives Mandate Different Loss Functions? CoRR abs/2110.12889 (2021) - [i6]Natália Alves, Megan Schuurmans, Geke Litjens, Joeran S. Bosma, John Hermans, Henkjan Huisman:
Fully Automatic Deep Learning Framework for Pancreatic Ductal Adenocarcinoma Detection on Computed Tomography. CoRR abs/2111.15409 (2021) - [i5]Joeran S. Bosma, Anindo Saha, Matin Hosseinzadeh, Ilse Slootweg, Maarten de Rooij, Henkjan Huisman:
Report-Guided Automatic Lesion Annotation for Deep Learning-Based Prostate Cancer Detection in bpMRI. CoRR abs/2112.05151 (2021) - 2020
- [c26]Xin Yu, Bin Lou, Bibo Shi, David J. Winkel, Nacim Arrahmane, Mamadou Diallo, Tongbai Meng, Heinrich von Busch, Robert Grimm, Berthold Kiefer, Dorin Comaniciu, Ali Kamen, Henkjan J. Huisman, Andrew Rosenkrantz, Tobias Penzkofer, Ivan Shabunin, Moon Hyung Choi, Qingsong Yang, Dieter Szolar:
False Positive Reduction Using Multiscale Contextual Features for Prostate Cancer Detection in Multi-Parametric MRI Scans. ISBI 2020: 1355-1359 - [i4]Anindo Saha, Matin Hosseinzadeh, Henkjan J. Huisman:
Encoding Clinical Priori in 3D Convolutional Neural Networks for Prostate Cancer Detection in bpMRI. CoRR abs/2011.00263 (2020) - 2019
- [c25]Shi Hu, Daniel E. Worrall, Stefan Knegt, Bas Veeling, Henkjan J. Huisman, Max Welling:
Supervised Uncertainty Quantification for Segmentation with Multiple Annotations. MICCAI (2) 2019: 137-145 - [i3]Shi Hu, Daniel E. Worrall, Stefan Knegt, Bastiaan S. Veeling, Henkjan J. Huisman, Max Welling:
Supervised Uncertainty Quantification for Segmentation with Multiple Annotations. CoRR abs/1907.01949 (2019) - 2018
- [c24]Eli Gibson, Yipeng Hu, Nooshin Ghavami, Hashim Uddin Ahmed, Caroline M. Moore, Mark Emberton, Henkjan J. Huisman, Dean C. Barratt:
Inter-site Variability in Prostate Segmentation Accuracy Using Deep Learning. MICCAI (4) 2018: 506-514 - 2017
- [j8]Eli Gibson, Yipeng Hu, Henkjan J. Huisman, Dean C. Barratt:
Designing image segmentation studies: Statistical power, sample size and reference standard quality. Medical Image Anal. 42: 44-59 (2017) - 2015
- [c23]Eli Gibson, Henkjan J. Huisman, Dean C. Barratt:
Statistical Power in Image Segmentation: Relating Sample Size to Reference Standard Quality. MICCAI (3) 2015: 105-113 - 2014
- [j7]Geert Litjens, Robert Toth, Wendy J. M. van de Ven, Caroline Hoeks, Sjoerd Kerkstra, Bram van Ginneken, Graham Vincent, Gwenaël Guillard, Neil Birbeck, Jindang Zhang, Robin Strand, Filip Malmberg, Yangming Ou, Christos Davatzikos, Matthias Kirschner, Florian Jung, Jing Yuan, Wu Qiu, Qinquan Gao, Philip J. Edwards, Bianca Maan, Ferdinand van der Heijden, Soumya Ghose, Jhimli Mitra, Jason Dowling, Dean C. Barratt, Henkjan J. Huisman, Anant Madabhushi:
Evaluation of prostate segmentation algorithms for MRI: The PROMISE12 challenge. Medical Image Anal. 18(2): 359-373 (2014) - [j6]Thomy Mertzanidou, John H. Hipwell, Stian Flage Johnsen, Lianghao Han, Björn Eiben, Zeike A. Taylor, Sébastien Ourselin, Henkjan J. Huisman, Ritse Mann, Ulrich Bick, Nico Karssemeijer, David J. Hawkes:
MRI to X-ray mammography intensity-based registration with simultaneous optimisation of pose and biomechanical transformation parameters. Medical Image Anal. 18(4): 674-683 (2014) - [j5]Geert Litjens, Oscar Debats, Jelle O. Barentsz, Nico Karssemeijer, Henkjan J. Huisman:
Computer-Aided Detection of Prostate Cancer in MRI. IEEE Trans. Medical Imaging 33(5): 1083-1092 (2014) - [c22]Geert J. S. Litjens, R. Elliott, Natalie Shih, Michael D. Feldman, Jelle O. Barentsz, Christina A. Hulsbergen van de Kaa, Iringo Kovacs, Henkjan J. Huisman, Anant Madabhushi:
Distinguishing prostate cancer from benign confounders via a cascaded classifier on multi-parametric MRI. Medical Imaging: Computer-Aided Diagnosis 2014: 903512 - [c21]Geert Litjens, Henkjan J. Huisman, R. Elliott, Natalie Shih, Michael D. Feldman, Satish Viswanath, Jurgen J. Fütterer, J. Bomers, Anant Madabhushi:
Distinguishing benign confounding treatment changes from residual prostate cancer on MRI following laser ablation. Medical Imaging: Image-Guided Procedures 2014: 90361D - 2013
- [j4]Tao Tan, Bram Platel, Ritse Mann, Henkjan J. Huisman, Nico Karssemeijer:
Chest wall segmentation in automated 3D breast ultrasound scans. Medical Image Anal. 17(8): 1273-1281 (2013) - [c20]Wendy J. M. van de Ven, Yipeng Hu, Jelle O. Barentsz, Nico Karssemeijer, Dean C. Barratt, Henkjan J. Huisman:
Surface-based prostate registration with biomechanical regularization. Medical Imaging: Image-Guided Procedures 2013: 86711R - 2012
- [j3]Thomy Mertzanidou, John H. Hipwell, Manuel Jorge Cardoso, Xiying Zhang, Christine Tanner, Sébastien Ourselin, Ulrich Bick, Henkjan J. Huisman, Nico Karssemeijer, David J. Hawkes:
MRI to X-ray mammography registration using a volume-preserving affine transformation. Medical Image Anal. 16(5): 966-975 (2012) - [j2]Tao Tan, Bram Platel, Henkjan J. Huisman, Clara I. Sánchez, Roel Mus, Nico Karssemeijer:
Computer-Aided Lesion Diagnosis in Automated 3-D Breast Ultrasound Using Coronal Spiculation. IEEE Trans. Medical Imaging 31(5): 1034-1042 (2012) - [c19]Thomy Mertzanidou, John H. Hipwell, Lianghao Han, Zeike A. Taylor, Henkjan J. Huisman, Ulrich Bick, Nico Karssemeijer, David J. Hawkes:
Intensity-Based MRI to X-ray Mammography Registration with an Integrated Fast Biomechanical Transformation. Digital Mammography / IWDM 2012: 48-55 - [c18]Jan M. Lesniak, Guido van Schie, Christine Tanner, Bram Platel, Henkjan J. Huisman, Nico Karssemeijer, Gábor Székely:
Multimodal Classification of Breast Masses in Mammography and MRI Using Unimodal Feature Selection and Decision Fusion. Digital Mammography / IWDM 2012: 88-95 - [c17]Geert J. S. Litjens, Jelle O. Barentsz, Nico Karssemeijer, Henkjan J. Huisman:
Automated computer-aided detection of prostate cancer in MR images: from a whole-organ to a zone-based approach. Medical Imaging: Computer-Aided Diagnosis 2012: 83150G - [c16]Geert Litjens, Oscar Debats, Wendy J. M. van de Ven, Nico Karssemeijer, Henkjan J. Huisman:
A Pattern Recognition Approach to Zonal Segmentation of the Prostate on MRI. MICCAI (2) 2012: 413-420 - 2011
- [c15]Geert J. S. Litjens, Pieter C. Vos, Jelle O. Barentsz, Nico Karssemeijer, Henkjan J. Huisman:
Automatic computer aided detection of abnormalities in multi-parametric prostate MRI. Medical Imaging: Computer-Aided Diagnosis 2011: 79630T - [c14]Tao Tan, Henkjan J. Huisman, Bram Platel, André Grivegnée, Roel Mus, Nico Karssemeijer:
Classification of breast lesions in automated 3D breast ultrasound. Medical Imaging: Computer-Aided Diagnosis 2011: 79630X - [c13]Wendy J. M. van de Ven, Geert J. S. Litjens, Jelle O. Barentsz, Thomas Hambrock, Henkjan J. Huisman:
Required Accuracy of MR-US Registration for Prostate Biopsies. Prostate Cancer Imaging 2011: 92-99 - [e1]Anant Madabhushi, Jason Dowling, Henkjan J. Huisman, Dean C. Barratt:
Prostate Cancer Imaging. Image Analysis and Image-Guided Interventions - International Workshop, Held in Conjunction with MICCAI 2011, Toronto, Canada, September 22, 2011. Proceedings. Lecture Notes in Computer Science 6963, Springer 2011, ISBN 978-3-642-23943-4 [contents] - 2010
- [c12]Oscar A. Debats, Nico Karssemeijer, Jelle O. Barentsz, Henkjan J. Huisman:
Automated classification of lymph nodes in USPIO-enhanced MR-images: a comparison of three segmentation methods. Medical Imaging: Computer-Aided Diagnosis 2010: 76240Q - [c11]Pieter C. Vos, Thomas Hambrock, Jelle O. Barentsz, Henkjan J. Huisman:
Automated segmentation of reference tissue for prostate cancer localization in dynamic contrast enhanced MRI. Medical Imaging: Computer-Aided Diagnosis 2010: 76240F - [c10]Aliaksei Makarau, Henkjan J. Huisman, Roel Mus, Miranda Zijp, Nico Karssemeijer:
Breast MRI intensity non-uniformity correction using mean-shift. Medical Imaging: Computer-Aided Diagnosis 2010: 76242D - [c9]Henkjan J. Huisman, Pieter C. Vos, Geert Litjens, Thomas Hambrock, Jelle O. Barentsz:
Computer Aided Detection of Prostate Cancer Using T2, DWI and DCE MRI: Methods and Clinical Applications. Prostate Cancer Imaging 2010: 4-14 - 2009
- [c8]Nico Karssemeijer, Henkjan J. Huisman, David J. Hawkes, John H. Hipwell, Tobias Böhler, Jan M. Lesniak, Christine Tanner, Gábor Székely, Wiro J. Niessen, Horst K. Hahn:
Integrating Biological Knowledge, Novel Imaging Modalities, and Modeling in Breast Cancer Diagnosis. ISBI 2009: 386-389 - [c7]Maartje M. Nillesen, Richard G. P. Lopata, Inge H. Gerrits, Henkjan J. Huisman, Johan M. Thijssen, Livia Kapusta, Chris L. de Korte:
Segmentation of 3D Cardiac Ultrasound Images Using Correlation of Radio Frequency Data. ISBI 2009: 522-525 - [c6]Pieter C. Vos, Thomas Hambrock, Jelle O. Barentsz, Henkjan J. Huisman:
Automated Calibration for Computerized Analysis of Prostate Lesions Using Pharmacokinetic Magnetic Resonance Images. MICCAI (1) 2009: 836-843 - [c5]Maartje M. Nillesen, Richard G. P. Lopata, Henkjan J. Huisman, Johan M. Thijssen, Livia Kapusta, Chris L. de Korte:
3D Cardiac Segmentation Using Temporal Correlation of Radio Frequency Ultrasound Data. MICCAI (1) 2009: 927-934 - 2008
- [c4]Pieter C. Vos, Thomas Hambrock, Jelle O. Barentsz, Henkjan J. Huisman:
Combining T2-weighted with dynamic MR images for computerized classification of prostate lesions. Medical Imaging: Computer-Aided Diagnosis 2008: 69150W - 2007
- [c3]Henkjan J. Huisman, Nico Karssemeijer:
Chestwall Segmentation in 3D Breast Ultrasound Using a Deformable Volume Model. IPMI 2007: 245-256 - [c2]Pieter C. Vos, Thomas Hambrock, Jurgen J. Fütterer, Christina A. Hulsbergen van de Kaa, Jelle O. Barentsz, Henkjan J. Huisman:
Effect of calibration on computerized analysis of prostate lesions using quantitative dynamic contrast-enhanced magnetic resonance imaging. Medical Imaging: Computer-Aided Diagnosis 2007: 65140U - 2006
- [j1]Saskia van Engeland, Peter R. Snoeren, Henkjan J. Huisman, Carla Boetes, Nico Karssemeijer:
Volumetric breast density estimation from full-field digital mammograms. IEEE Trans. Medical Imaging 25(3): 273-282 (2006) - 2003
- [c1]J. A. van Dalen, Henkjan J. Huisman, A. Welmers, Jelle O. Barentsz:
Semi-automatic Image Registration of MRI to CT Data of the Prostate Using Gold Markers as Fiducials. WBIR 2003: 311-320
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