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Giorgio Grillo
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2020 – today
- 2021
- [j27]Marco Antonio Tangaro
, Giuseppe Defazio
, Bruno Fosso
, Vito Flavio Licciulli
, Giorgio Grillo, Giacinto Donvito
, Enrico Lavezzo, Giacomo Baruzzo
, Graziano Pesole
, Monica Santamaria
:
ITSoneWB: profiling global taxonomic diversity of eukaryotic communities on Galaxy. Bioinform. 37(22): 4253-4254 (2021) - 2020
- [j26]Simone Puccio
, Giorgio Grillo, Arianna Consiglio
, Maria Felicia Soluri, Daniele Sblattero, Diego Cotella
, Claudio Santoro, Sabino Liuni, Gianluca De Bellis
, Enrico Lugli
, Clelia Peano
, Flavio Licciulli
:
InteractomeSeq: a web server for the identification and profiling of domains and epitopes from phage display and next generation sequencing data. Nucleic Acids Res. 48(Webserver-Issue): W200-W207 (2020)
2010 – 2019
- 2018
- [j25]Monica Santamaria
, Bruno Fosso
, Flavio Licciulli
, Bachir Balech
, Ilaria Larini
, Giorgio Grillo, Giorgio De Caro, Sabino Liuni, Graziano Pesole
:
ITSoneDB: a comprehensive collection of eukaryotic ribosomal RNA Internal Transcribed Spacer 1 (ITS1) sequences. Nucleic Acids Res. 46(Database-Issue): D127-D132 (2018) - 2017
- [j24]Simone Puccio
, Giorgio Grillo, Flavio Licciulli
, Marco Severgnini, Sabino Liuni, Silvio Bicciato, Gianluca De Bellis
, Francesco Ferrari
, Clelia Peano
:
WoPPER: Web server for Position Related data analysis of gene Expression in Prokaryotes. Nucleic Acids Res. 45(Webserver-Issue): W109-W115 (2017) - 2016
- [j23]Arianna Consiglio
, Corrado Mencar, Giorgio Grillo, Flaviana Marzano
, Mariano Francesco Caratozzolo
, Sabino Liuni:
A fuzzy method for RNA-Seq differential expression analysis in presence of multireads. BMC Bioinform. 17(S-12): 95-110 (2016) - 2015
- [c2]Arianna Consiglio
, Corrado Mencar, Giorgio Grillo, Sabino Liuni:
Managing NGS Differential Expression Uncertainty with Fuzzy Sets. CIBB 2015: 42-53 - 2012
- [j22]Monica Santamaria
, Bruno Fosso
, Arianna Consiglio
, Giorgio De Caro, Giorgio Grillo
, Flavio Licciulli
, Sabino Liuni, Marinella Marzano
, Daniel Alonso-Alemany, Gabriel Valiente
, Graziano Pesole
:
Reference databases for taxonomic assignment in metagenomics. Briefings Bioinform. 13(6): 682-695 (2012) - [j21]Arianna Consiglio
, Massimo Carella
, Giorgio De Caro, Gianfranco Delle Foglie, Candida Giovannelli, Giorgio Grillo
, Massimo Ianigro, Flavio Licciulli
, Orazio Palumbo
, Ada Piepoli, Elena Ranieri, Sabino Liuni:
BEAT: Bioinformatics Exon Array Tool to store, analyze and visualize Affymetrix GeneChip Human Exon Array data from disease experiments. BMC Bioinform. 13(S-4): S21 (2012) - [j20]Paolo Pannarale, Domenico Catalano
, Giorgio De Caro, Giorgio Grillo
, Pietro Leo, Graziano Pappadà, Francesco Rubino
, Gaetano Scioscia, Flavio Licciulli
:
GIDL: a rule based expert system for GenBank Intelligent Data Loading into the Molecular Biodiversity database. BMC Bioinform. 13(S-4): S4 (2012) - 2010
- [j19]Giorgio Grillo
, Antonio Turi, Flavio Licciulli
, Flavio Mignone, Sabino Liuni, Sandro Banfi
, Vincenzo Alessandro Gennarino, David Stephen Horner, Giulio Pavesi
, Ernesto Picardi
, Graziano Pesole
:
UTRdb and UTRsite (RELEASE 2010): a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs. Nucleic Acids Res. 38(Database-Issue): 75-80 (2010)
2000 – 2009
- 2009
- [j18]Antonio Turi, Corrado Loglisci
, Eliana Salvemini, Giorgio Grillo
, Donato Malerba
, Domenica D'Elia
:
Computational annotation of UTR cis-regulatory modules through Frequent Pattern Mining. BMC Bioinform. 10(S-6) (2009) - [c1]Corrado Loglisci, Eliana Salvemini, Antonio Turi, Giorgio Grillo, Donato Malerba, Domenica D'Elia:
Mining Frequent Patterns of Biological Spaced Motifs. SEBD 2009: 117-124 - 2007
- [j17]Elisabetta Sbisà, Domenico Catalano
, Giorgio Grillo
, Flavio Licciulli
, Antonio Turi, Sabino Liuni, Graziano Pesole
, Anna De Grassi
, Mariano Francesco Caratozzolo
, Anna Maria D'Erchia
, Beatriz Navarro
, Apollonia Tullo, Cecilia Saccone, Andreas Gisel
:
p53FamTaG: a database resource of human p53, p63 and p73 direct target genes combining in silico prediction and microarray data. BMC Bioinform. 8(S-1) (2007) - [j16]Paolo D'Onorio De Meo, Danilo Carrabino, Nico Sanna
, Tiziana Castrignanò, Giorgio Grillo
, Flavio Licciulli
, Sabino Liuni, Matteo Re
, Flavio Mignone, Graziano Pesole
:
A high performance grid-web service framework for the identification of 'conserved sequence tags'. Future Gener. Comput. Syst. 23(3): 371-381 (2007) - 2006
- [j15]Tiziana Castrignanò, Paolo D'Onorio De Meo, Giorgio Grillo
, Sabino Liuni, Flavio Mignone, Ivano Giuseppe Talamo, Graziano Pesole
:
GenoMiner: a tool for genome-wide search of coding and non-coding conserved sequence tags. Bioinform. 22(4): 497-499 (2006) - [j14]Domenico Catalano
, Flavio Licciulli
, Antonio Turi, Giorgio Grillo
, Cecilia Saccone, Domenica D'Elia
:
MitoRes: a resource of nuclear-encoded mitochondrial genes and their products in Metazoa. BMC Bioinform. 7: 36 (2006) - 2005
- [j13]Flavio Mignone, Giorgio Grillo
, Flavio Licciulli
, Michele Iacono, Sabino Liuni, Paul J. Kersey
, Jorge Duarte, Cecilia Saccone, Graziano Pesole
:
UTRdb and UTRsite: a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs. Nucleic Acids Res. 33(Database-Issue): 141-146 (2005) - 2004
- [j12]Andreas Gisel
, Maria Panetta, Giorgio Grillo
, Flavio Licciulli
, Sabino Liuni, Cecilia Saccone, Graziano Pesole
:
DNAfan: a software tool for automated extraction and analysis of user-defined sequence regions. Bioinform. 20(18): 3676-3679 (2004) - [j11]Tiziana Castrignanò, Alessandro Canali, Giorgio Grillo
, Sabino Liuni, Flavio Mignone, Graziano Pesole
:
CSTminer: a web tool for the identification of coding and noncoding conserved sequence tags through cross-species genome comparison. Nucleic Acids Res. 32(Web-Server-Issue): 624-627 (2004) - 2003
- [j10]Giorgio Grillo
, Flavio Licciulli
, Sabino Liuni, Elisabetta Sbisà, Graziano Pesole
:
PatSearch: a program for the detection of patterns and structural motifs in nucleotide sequences. Nucleic Acids Res. 31(13): 3608-3612 (2003) - 2002
- [j9]Marcella Attimonelli, Domenico Catalano
, Carmela Gissi, Giorgio Grillo, Flavio Licciulli
, Sabino Liuni, Monica Santamaria
, Graziano Pesole, Cecilia Saccone:
MitoNuc: a database of nuclear genes coding for mitochondrial proteins. Update 2002. Nucleic Acids Res. 30(1): 172-173 (2002) - [j8]Graziano Pesole, Sabino Liuni, Giorgio Grillo, Flavio Licciulli
, Flavio Mignone, Carmela Gissi, Cecilia Saccone:
UTRdb and UTRsite: specialized databases of sequences and functional elements of 5' and 3' untranslated regions of eukaryotic mRNAs. Update 2002. Nucleic Acids Res. 30(1): 335-340 (2002) - 2000
- [j7]Graziano Pesole, Giorgio Grillo, Alessandra Larizza, Sabino Liuni:
The Untranslated Regions of Eukaryotic MRNAs: Structure, Function, Evolution and Bioinformatic Tools for Their Analysis. Briefings Bioinform. 1(3): 236-249 (2000) - [j6]Graziano Pesole, Carmela Gissi, Domenico Catalano
, Giorgio Grillo, Flavio Licciulli
, Sabino Liuni, Marcella Attimonelli, Cecilia Saccone:
MitoNuc and MitoAln: two related databases of nuclear genes coding for mitochondrial proteins. Nucleic Acids Res. 28(1): 163-165 (2000) - [j5]Graziano Pesole, Sabino Liuni, Giorgio Grillo, Flavio Licciulli
, Alessandra Larizza, Wojciech Makalowski, Cecilia Saccone:
UTRdb and UTRsite: specialized databases of sequences and functional elements of 5' and 3' untranslated regions of eukaryotic mRNAs. Nucleic Acids Res. 28(1): 193-196 (2000)
1990 – 1999
- 1999
- [j4]Graziano Pesole
, Sabino Liuni, Giorgio Grillo
, Matilde Ippedico, Alessandra Larizza, Wojciech Makalowski
, Cecilia Saccone:
UTRdb: a specialized database of 5' and 3' untranslated regions of eukaryotic mRNAs. Nucleic Acids Res. 27(1): 188-191 (1999) - 1998
- [j3]Graziano Pesole
, Sabino Liuni, Giorgio Grillo
, Cecilia Saccone:
UTRdb: a specialized database of 5'- and 3'-untranslated regions of eukaryotic mRNAs. Nucleic Acids Res. 26(1): 192-195 (1998) - 1996
- [j2]Giorgio Grillo, Marcella Attimonelli, Sabino Liuni, Graziano Pesole:
CLEANUP: a fast computer program for removing redundancies from nucleotide sequence databases. Comput. Appl. Biosci. 12(1): 1-8 (1996) - [j1]Graziano Pesole, Giorgio Grillo, Sabino Liuni:
Databases of MRNA Untranslated Regions for Metazoa. Comput. Chem. 20(1): 141-144 (1996)
Coauthor Index
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