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Davide Chiarugi
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2020 – today
- 2023
- [c14]Alberto Mulone, Sherine Awad, Davide Chiarugi
, Marco Aldinucci:
Porting the Variant Calling Pipeline for NGS data in cloud-HPC environment. COMPSAC 2023: 1858-1863 - 2022
- [j9]Giorgia Giacomini, Caterina Graziani
, Veronica Lachi
, Pietro Bongini
, Niccolò Pancino
, Monica Bianchini
, Davide Chiarugi
, Angelo Valleriani
, Paolo Andreini:
A Neural Network Approach for the Analysis of Reproducible Ribo-Seq Profiles. Algorithms 15(8): 274 (2022)
2010 – 2019
- 2016
- [j8]Carlos Olarte
, Davide Chiarugi
, Moreno Falaschi
, Diana Hermith
:
A proof theoretic view of spatial and temporal dependencies in biochemical systems. Theor. Comput. Sci. 641: 25-42 (2016) - 2015
- [j7]Celine Sin
, Davide Chiarugi
, Angelo Valleriani
:
Single-molecule modeling of mRNA degradation by miRNA: Lessons from data. BMC Syst. Biol. 9(S-3): S2 (2015) - [j6]Paolo Paradisi, Paolo Allegrini, Davide Chiarugi
:
A renewal model for the emergence of anomalous solute crowding in liposomes. BMC Syst. Biol. 9(S-3): S7 (2015) - [j5]Davide Chiarugi
, Moreno Falaschi
, Diana Hermith
, Carlos Olarte
, Luca Torella:
Modelling non-Markovian dynamics in biochemical reactions. BMC Syst. Biol. 9(S-3): S8 (2015) - [j4]Chiara Bodei
, Luca Bortolussi
, Davide Chiarugi
, Maria Luisa Guerriero, Alberto Policriti
, Alessandro Romanel
:
On the impact of discreteness and abstractions on modelling noise in gene regulatory networks. Comput. Biol. Chem. 56: 98-108 (2015) - [c13]Davide Chiarugi
, Moreno Falaschi
, Carlos Olarte
, Catuscia Palamidessi
:
A Declarative View of Signaling Pathways. Programming Languages with Applications to Biology and Security 2015: 183-201 - 2014
- [j3]Chiara Bodei
, Linda Brodo, Roberto Bruni, Davide Chiarugi
:
A Flat Process Calculus for Nested Membrane Interactions. Sci. Ann. Comput. Sci. 24(1): 91-136 (2014) - [c12]Davide Chiarugi, Moreno Falaschi, Diana Hermith, Carlos Olarte:
A framework for modelling spatially dependent interactions of biological systems in CCP. IWBBIO 2014: 912-923 - [c11]Paolo Paradisi, Davide Chiarugi:
Biochemical Reactions as Renewal Processes: the case of mRNA Degradation. IWBBIO 2014: 1574-1576 - [c10]Davide Chiarugi
, Moreno Falaschi
, Diana Hermith
, Carlos Olarte
:
Verification of Spatial and Temporal Modalities in Biochemical Systems. SASB 2014: 29-44 - 2013
- [c9]Davide Chiarugi, Moreno Falaschi, Diana Hermith, Roberto Marangoni, Carlos Olarte:
Stochastic modelling of non Markovian Dynamics in Biochemical Reactions. IWBBIO 2013: 537-544 - 2012
- [c8]Davide Chiarugi
, Moreno Falaschi
, Diana Hermith
, Michell Guzmán, Carlos Olarte
:
Simulating Signalling Pathways With BioWayS. CS2Bio 2012: 17-34 - 2011
- [c7]Chiara Bodei
, Linda Brodo, Davide Chiarugi
:
Control Flow Analysis of Generalised Boolean Networks. SASB 2011: 3-22 - 2010
- [c6]Davide Chiarugi
, Moreno Falaschi
, Carlos Olarte
, Catuscia Palamidessi
:
Compositional modelling of signalling pathways in timed concurrent constraint programming. BCB 2010: 414-417 - [c5]Chiara Bodei, Andrea Bracciali, Davide Chiarugi
, Roberta Gori:
A Taxonomy of Causality-Based Biological Properties. FBTC 2010: 116-133
2000 – 2009
- 2008
- [j2]Chiara Bodei
, Andrea Bracciali
, Davide Chiarugi
:
On deducing causality in metabolic networks. BMC Bioinform. 9(S-4) (2008) - [c4]Davide Chiarugi
, Pierpaolo Degano, Jan Bert Van Klinken, Roberto Marangoni
:
Cells in Silico: A Holistic Approach. SFM 2008: 366-386 - [c3]Chiara Bodei
, Andrea Bracciali
, Davide Chiarugi
:
Control Flow Analysis for Brane Calculi. MeCBIC 2008: 59-75 - 2007
- [j1]Davide Chiarugi
, Pierpaolo Degano, Roberto Marangoni
:
A Computational Approach to the Functional Screening of Genomes. PLoS Comput. Biol. 3(9) (2007) - 2006
- [c2]Davide Chiarugi, M. Chinellato, Pierpaolo Degano, G. Lo Brutto, Roberto Marangoni:
Feedbacks and Oscillations in the Virtual Cell VICE. CMSB 2006: 93-107 - 2004
- [c1]Davide Chiarugi, Michele Curti, Pierpaolo Degano, Roberto Marangoni:
VICE: A VIrtual CEll. CMSB 2004: 207-220
Coauthor Index
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last updated on 2024-08-05 20:19 CEST by the dblp team
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