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Paolo Marcatili
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2020 – today
- 2022
- [j18]Magnus Haraldson Høie
, Erik Nicolas Kiehl, Bent Petersen
, Morten Nielsen
, Ole Winther
, Henrik Nielsen
, Jeppe Hallgren
, Paolo Marcatili
:
NetSurfP-3.0: accurate and fast prediction of protein structural features by protein language models and deep learning. Nucleic Acids Res. 50(W1): 510-515 (2022) - 2020
- [j17]Francesco Ambrosetti, Tobias Hegelund Olsen
, Pier Paolo Olimpieri
, Brian Jiménez-García
, Edoardo Milanetti
, Paolo Marcatili, Alexandre M. J. J. Bonvin
:
proABC-2: PRediction of AntiBody contacts v2 and its application to information-driven docking. Bioinform. 36(20): 5107-5108 (2020) - [j16]Wanessa C. Lima, Elisabeth Gasteiger, Paolo Marcatili
, Paula Duek Roggli
, Amos Bairoch
, Pierre Cosson:
The ABCD database: a repository for chemically defined antibodies. Nucleic Acids Res. 48(Database-Issue): D261-D264 (2020)
2010 – 2019
- 2019
- [j15]Swapnil Mahajan
, Zhen Yan, Martin Closter Jespersen, Kamilla Kjærgaard Jensen
, Paolo Marcatili
, Morten Nielsen
, Alessandro Sette, Bjoern Peters:
Benchmark datasets of immune receptor-epitope structural complexes. BMC Bioinform. 20(1): 490:1-490:7 (2019) - [j14]Sandeep Kumar Dhanda
, Swapnil Mahajan
, Sinu Paul, Zhen Yan, Haeuk Kim, Martin Closter Jespersen, Vanessa Isabell Jurtz, Massimo Andreatta
, Jason A. Greenbaum, Paolo Marcatili
, Alessandro Sette, Morten Nielsen
, Bjoern Peters:
IEDB-AR: immune epitope database - analysis resource in 2019. Nucleic Acids Res. 47(Webserver-Issue): W502-W506 (2019) - 2018
- [j13]Eleftheria Polychronidou, Ilias Kalamaras, Andreas Agathangelidis
, Lesley Ann Sutton, Xiao-Jie Yan, Vasilis Bikos, Anna Vardi, Konstantinos Mochament, Nicholas Chiorazzi, Chrysoula Belessi, Richard Rosenquist
, Paolo Ghia
, Kostas Stamatopoulos
, Panayiotis M. Vlamos
, Anna Chailyan, Nanna Overby, Paolo Marcatili
, Anastasia Hatzidimitriou, Dimitrios Tzovaras
:
Automated shape-based clustering of 3D immunoglobulin protein structures in chronic lymphocytic leukemia. BMC Bioinform. 19-S(14): 67-81 (2018) - 2017
- [j12]Martin Closter Jespersen, Bjoern Peters, Morten Nielsen
, Paolo Marcatili
:
BepiPred-2.0: improving sequence-based B-cell epitope prediction using conformational epitopes. Nucleic Acids Res. 45(Webserver-Issue): W24-W29 (2017) - [c2]Konstantinos Mochament, Andreas Agathangelidis
, Eleftheria Polychronidou, Christos Palaskas, Elias Kalamaras, Panagiotis Moschonas, Kostas Stamatopoulos, Anna Chailyan, Nanna Overby, Paolo Marcatili
, Anastasia Hadzidimitriou, Dimitrios Tzovaras
:
3D Protein-Structure-Oriented Discovery of Clinical Relation Across Chronic Lymphocytic Leukemia Patients. IWBBIO (2) 2017: 139-150 - 2016
- [j11]Lorenzo Asti, Guido Uguzzoni, Paolo Marcatili
, Andrea Pagnani
:
Maximum-Entropy Models of Sequenced Immune Repertoires Predict Antigen-Antibody Affinity. PLoS Comput. Biol. 12(4) (2016) - 2015
- [j10]Pier Paolo Olimpieri
, Paolo Marcatili
, Anna Tramontano:
Tabhu: tools for antibody humanization. Bioinform. 31(3): 434-435 (2015) - [j9]Michael Schantz Klausen
, Mads Valdemar Anderson
, Martin Closter Jespersen, Morten Nielsen
, Paolo Marcatili
:
LYRA, a webserver for lymphocyte receptor structural modeling. Nucleic Acids Res. 43(Webserver-Issue): W349-W355 (2015) - 2014
- [j8]Mario Abdel Messih, Rosalba Lepore
, Paolo Marcatili
, Anna Tramontano:
Improving the accuracy of the structure prediction of the third hypervariable loop of the heavy chains of antibodies. Bioinform. 30(19): 2733-2740 (2014) - 2013
- [j7]Pier Paolo Olimpieri
, Anna Chailyan, Anna Tramontano, Paolo Marcatili
:
Prediction of site-specific interactions in antibody-antigen complexes: the proABC method and server. Bioinform. 29(18): 2285-2291 (2013) - 2012
- [j6]Anna Chailyan, Anna Tramontano, Paolo Marcatili
:
A database of immunoglobulins with integrated tools: DIGIT. Nucleic Acids Res. 40(Database-Issue): 1230-1234 (2012) - 2011
- [j5]Matteo Floris
, Domenico Raimondo
, Guido Leoni
, Massimiliano Orsini
, Paolo Marcatili
, Anna Tramontano:
MAISTAS: a tool for automatic structural evaluation of alternative splicing products. Bioinform. 27(12): 1625-1629 (2011) - 2010
- [j4]Loredana Le Pera
, Paolo Marcatili
, Anna Tramontano:
PICMI: mapping point mutations on genomes. Bioinform. 26(22): 2904-2905 (2010) - [c1]Anna Chailyan, Davide Cirillo, Paolo Marcatili
, Anna Tramontano:
Structural landscape of immunoglobulin lambda light chains. BCB 2010: 651-652
2000 – 2009
- 2008
- [j3]Paolo Marcatili
, Alessandra Rosi, Anna Tramontano:
PIGS: automatic prediction of antibody structures. Bioinform. 24(17): 1953-1954 (2008) - [j2]Gabriele Ausiello, Pier Federico Gherardini, Paolo Marcatili
, Anna Tramontano, Allegra Via, Manuela Helmer-Citterich
:
FunClust: a web server for the identification of structural motifs in a set of non-homologous protein structures. BMC Bioinform. 9(S-2) (2008) - [j1]Paolo Marcatili
, Giovanni Bussotti
, Anna Tramontano:
The MoVIN server for the analysis of protein interaction networks. BMC Bioinform. 9(S-2) (2008)
Coauthor Index
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last updated on 2024-08-14 22:15 CEST by the dblp team
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