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ORCIDKeehyoung Joo
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2020 – today
- 2023
[j12]Jae-Won Lee, Jong-Hyun Won, Seonggwang Jeon, Yujin Choo, Yubin Yeon, Jin-Seon Oh, Minsoo Kim
, Seonhwa Kim, InSuk Joung, Cheongjae Jang, Sung Jong Lee, Tae Hyun Kim, Kyong Hwan Jin, Giltae Song, Eun-Sol Kim, Jejoong Yoo, Eunok Paek, Yung-Kyun Noh, Keehyoung Joo:
DeepFold: enhancing protein structure prediction through optimized loss functions, improved template features, and re-optimized energy function. Bioinform. 39(12) (2023)- [j11]Jimin Park, InSuk Joung, Keehyoung Joo, Jooyoung Lee:
Application of conformational space annealing to the protein structure modeling using cryo-EM maps. J. Comput. Chem. 44(30): 2332-2346 (2023) - 2020
- [j10]Agnieszka S. Karczynska, Karolina Zieba, Urszula Uciechowska, Magdalena A. Mozolewska, Pawel Krupa, Emilia A. Lubecka, Agnieszka G. Lipska, Celina Sikorska, Sergey A. Samsonov, Adam K. Sieradzan, Artur Gieldon, Adam Liwo, Rafal Slusarz, Magdalena Slusarz, Jooyoung Lee, Keehyoung Joo, Cezary Czaplewski:
Improved Consensus-Fragment Selection in Template-Assisted Prediction of Protein Structures with the UNRES Force Field in CASP13. J. Chem. Inf. Model. 60(3): 1844-1864 (2020)
2010 – 2019
- 2019
- [j9]Seung Hwan Hong, Keehyoung Joo, Jooyoung Lee:
ConDo: protein domain boundary prediction using coevolutionary information. Bioinform. 35(14): 2411-2417 (2019) - 2018
- [j8]InSuk Joung, Jong Yun Kim, Steven P. Gross, Keehyoung Joo, Jooyoung Lee:
Conformational Space Annealing explained: A general optimization algorithm, with diverse applications. Comput. Phys. Commun. 223: 28-33 (2018) - 2017
- [j7]Agnieszka S. Karczynska, Cezary Czaplewski, Pawel Krupa, Magdalena A. Mozolewska, Keehyoung Joo, Jooyoung Lee, Adam Liwo:
Ergodicity and model quality in template-restrained canonical and temperature/Hamiltonian replica exchange coarse-grained molecular dynamics simulations of proteins. J. Comput. Chem. 38(31): 2730-2746 (2017) - [j6]Seungryong Heo, Juyong Lee, Keehyoung Joo, Hang-Cheol Shin, Jooyoung Lee:
Protein Loop Structure Prediction Using Conformational Space Annealing. J. Chem. Inf. Model. 57(5): 1068-1078 (2017) - 2016
- [j5]Magdalena A. Mozolewska, Pawel Krupa, Bartlomiej Zaborowski, Adam Liwo, Jooyoung Lee, Keehyoung Joo, Cezary Czaplewski:
Use of Restraints from Consensus Fragments of Multiple Server Models To Enhance Protein-Structure Prediction Capability of the UNRES Force Field. J. Chem. Inf. Model. 56(11): 2263-2279 (2016) - 2015
- [j4]Juyong Lee, Kiho Lee, InSuk Joung, Keehyoung Joo, Bernard R. Brooks, Jooyoung Lee:
Sigma-RF: prediction of the variability of spatial restraints in template-based modeling by random forest. BMC Bioinform. 16: 94:1-94:12 (2015) - [j3]Pawel Krupa, Magdalena A. Mozolewska, Keehyoung Joo, Jooyoung Lee, Cezary Czaplewski, Adam Liwo:
Prediction of Protein Structure by Template-Based Modeling Combined with the UNRES Force Field. J. Chem. Inf. Model. 55(6): 1271-1281 (2015) - 2014
- [j2]Joo-Hyun Seo, Jihyang Park, Eun-Mi Kim, Juhan Kim, Keehyoung Joo, Jooyoung Lee, Byung-Gee Kim:
Subgrouping Automata: Automatic sequence subgrouping using phylogenetic tree-based optimum subgrouping algorithm. Comput. Biol. Chem. 48: 64-70 (2014) - 2012
- [p1]Jaegul Choo, Fuxin Li, Keehyoung Joo, Haesun Park:
A Visual Analytics Approach for Protein Disorder Prediction. Expanding the Frontiers of Visual Analytics and Visualization 2012: 163-174
2000 – 2009
- 2008
- [j1]Jinwoo Lee, Keehyoung Joo, Seung-Yeon Kim, Jooyoung Lee:
Re-examination of structure optimization of off-lattice protein AB models by conformational space annealing. J. Comput. Chem. 29(14): 2479-2484 (2008)
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