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David Posada
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2020 – today
- 2022
- [c7]Davide Maspero
, Fabrizio Angaroni
, Lucrezia Patruno
, Daniele Ramazzotti
, David Posada
, Alex Graudenzi
:
Exploring the Solution Space of Cancer Evolution Inference Frameworks for Single-Cell Sequencing Data. WIVACE 2022: 70-81
2010 – 2019
- 2018
- [j20]Merly Escalona
, Sara Rocha, David Posada
:
NGSphy: phylogenomic simulation of next-generation sequencing data. Bioinform. 34(14): 2506-2507 (2018) - [j19]Wandrille Duchemin
, Guillaume Gence, Anne-Muriel Arigon Chifolleau, Lars Arvestad
, Mukul S. Bansal
, Vincent Berry
, Bastien Boussau, François Chevenet
, Nicolas Comte, Adrián A. Davín, Christophe Dessimoz
, David Dylus, Damir Hasic, Diego Mallo, Rémi Planel, David Posada
, Céline Scornavacca, Gergely J. Szöllosi
, Louxin Zhang, Eric Tannier, Vincent Daubin:
RecPhyloXML: a format for reconciled gene trees. Bioinform. 34(21): 3646-3652 (2018) - 2016
- [j18]Manuel Aurelio Rodriguez Pascual, Christos Kanellopoulos, Antonio J. Rubio-Montero
, Diego Darriba
, Ognjen Prnjat, David Posada
, Rafael Mayo-García
:
Adapting Reproducible Research Capabilities to Resilient Distributed Calculations. Int. J. Grid High Perform. Comput. 8(1): 58-69 (2016) - 2014
- [j17]Jose Manuel Santorum, Diego Darriba
, Guillermo L. Taboada
, David Posada
:
jmodeltest.org: selection of nucleotide substitution models on the cloud. Bioinform. 30(9): 1310-1311 (2014) - [j16]Diego Darriba
, Guillermo L. Taboada
, Ramon Doallo, David Posada
:
High-performance computing selection of models of DNA substitution for multicore clusters. Int. J. High Perform. Comput. Appl. 28(1): 112-125 (2014) - 2013
- [j15]Miguel Arenas
, Helena G. Dos Santos
, David Posada
, Ugo Bastolla
:
Protein evolution along phylogenetic histories under structurally constrained substitution models. Bioinform. 29(23): 3020-3028 (2013) - 2011
- [j14]Diego Darriba
, Guillermo L. Taboada
, Ramon Doallo, David Posada
:
ProtTest 3: fast selection of best-fit models of protein evolution. Bioinform. 27(8): 1164-1165 (2011) - [c6]Diego Darriba
, Guillermo L. Taboada
, Ramon Doallo, David Posada
:
HPC selection of models of DNA substitution. CMSB 2011: 65-72 - 2010
- [j13]Darren P. Martin, Philippe Lemey, Martin Lott, Vincent Moulton
, David Posada
, Pierre Lefeuvre
:
RDP3: a flexible and fast computer program for analyzing recombination. Bioinform. 26(19): 2462-2463 (2010) - [j12]Miguel Arenas
, Mateus Patricio
, David Posada
, Gabriel Valiente
:
Characterization of phylogenetic networks with NetTest. BMC Bioinform. 11: 268 (2010) - [j11]Daniel Glez-Peña
, Daniel Gómez-Blanco, Miguel Reboiro-Jato
, Florentino Fdez-Riverola
, David Posada
:
ALTER: program-oriented conversion of DNA and protein alignments. Nucleic Acids Res. 38(Web-Server-Issue): 14-18 (2010) - [c5]Diego Darriba
, Guillermo L. Taboada
, Ramon Doallo, David Posada
:
ProtTest-HPC: Fast Selection of Best-Fit Models of Protein Evolution. Euro-Par Workshops 2010: 177-184 - [c4]Marta Loureiro, Miguel Pan, Manuel Aurelio Rodriguez Pascual, David Posada
, Rafael Mayo:
Grid selection of models of nucleotide substitution. HealthGrid 2010: 244-248 - [c3]Mateus Patricio, Federico Abascal, Rafael Zardoya
, David Posada
:
Accurate Selection of Models of Protein Evolution. IWPACBB 2010: 117-121
2000 – 2009
- 2009
- [j10]Sergei L. Kosakovsky Pond, David Posada
, Eric W. Stawiski, Colombe Chappey, Art F. Y. Poon, Gareth Hughes, Esther Fearnhill, Mike B. Gravenor, Andrew J. Leigh Brown
, Simon D. W. Frost:
An Evolutionary Model-Based Algorithm for Accurate Phylogenetic Breakpoint Mapping and Subtype Prediction in HIV-1. PLoS Comput. Biol. 5(11) (2009) - [c2]Mateus Patricio, Jaime Huerta-Cepas, Toni Gabaldón, Rafael Zardoya
, David Posada
:
Automatic Prediction of the Genetic Code. IWANN (2) 2009: 1125-1129 - 2007
- [j9]Miguel Arenas
, David Posada
:
Recodon: Coalescent simulation of coding DNA sequences with recombination, migration and demography. BMC Bioinform. 8 (2007) - 2006
- [j8]Sergei L. Kosakovsky Pond, David Posada
, Michael B. Gravenor, Christopher H. Woelk, Simon D. W. Frost:
GARD: a genetic algorithm for recombination detection. Bioinform. 22(24): 3096-3098 (2006) - [j7]Federico Abascal, Rafael Zardoya
, David Posada
:
GenDecoder: genetic code prediction for metazoan mitochondria. Nucleic Acids Res. 34(Web-Server-Issue): 389-393 (2006) - [j6]David Posada
:
ModelTest Server: a web-based tool for the statistical selection of models of nucleotide substitution online. Nucleic Acids Res. 34(Web-Server-Issue): 700-703 (2006) - 2005
- [j5]Darren P. Martin, Carolyn Williamson, David Posada
:
RDP2: recombination detection and analysis from sequence alignments. Bioinform. 21(2): 260-262 (2005) - [j4]Federico Abascal, Rafael Zardoya
, David Posada
:
ProtTest: selection of best-fit models of protein evolution. Bioinform. 21(9): 2104-2105 (2005) - [j3]David Posada
, Taylor J. Maxwell, Alan R. Templeton
:
TreeScan: a bioinformatic application to search for genotype/phenotype associations using haplotype trees. Bioinform. 21(9): 2130-2132 (2005) - 2003
- [j2]David Posada
, Carsten Wiuf
:
Simulating haplotype blocks in the human genome. Bioinform. 19(2): 289-290 (2003) - 2002
- [c1]Mark J. Clement, Quinn Snell, Peter Walker, David Posada
, Keith A. Crandall
:
TCS: Estimating Gene Genealogies. IPDPS 2002
1990 – 1999
- 1998
- [j1]David Posada
, Keith A. Crandall
:
MODELTEST: testing the model of DNA substitution. Bioinform. 14(9): 817-818 (1998)
Coauthor Index
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