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ORCIDEncyclopedia of Bioinformatics and Computational Biology 2019
- Shoba Ranganathan, Michael Gribskov, Kenta Nakai, Christian Schönbach:
Encyclopedia of Bioinformatics and Computational Biology - Volume 2. Elsevier 2019, ISBN 978-0-12-811432-2 - Pascale Gaudet:
The Gene Ontology. 1-7 - Pier Luigi Martelli, Giuseppe Profiti
, Rita Casadio:
Protein Functional Annotation. 8-14 - Chi N. I. Pang, Marc R. Wilkins:
Protein Post-Translational Modification Prediction. 15-27 - Kentaro Tomii:
Protein Properties. 28-33 - Teresa K. Attwood, Alex L. Mitchell:
The Evolution of Protein Family Databases. 34-45 - Pier Luigi Martelli, Castrense Savojardo, Giuseppe Profiti, Rita Casadio:
Transmembrane Domain Prediction. 46-52 - Kenta Nakai, Kenichiro Imai:
Prediction of Protein Localization. 53-59 - Frédérique Lisacek:
Proteome Informatics. 60-75 - Thibault Robin:
Proteomics Data Representation and Databases. 76-83 - Aivett Bilbao:
Proteomics Mass Spectrometry Data Analysis Tools. 84-95 - Sarinder Kaur Dhillon:
Biological Databases. 96-117 - Shalini Kaushik, Sandeep Kaushik, Deepak Sharma:
Functional Genomics. 118-133 - Edgar Wingender, Alexander E. Kel, Mathias Krull:
Transcription Factor Databases. 134-141 - Preeti Pandey, Sabeeha Hasnain, Shandar Ahmad:
Protein-DNA Interactions. 142-154 - Enze Liu, Lang Li, Lijun Cheng:
Gene Regulatory Network Review. 155-164 - Xiangying Sun, Michael Gribskov:
MicroRNA and lncRNA Databases and Analysis. 165-170 - Molly A. Hall, Brian S. Cole, Jason H. Moore:
Gene-Gene Interactions: An Essential Component to Modeling Complexity for Precision Medicine. 171-177 - Anil K. Kesarwani, Ankit Malhotra, Anuj Srivastava, Guruprasad Ananda, Haitham Ashoor, Parveen Kumar, Rupesh K. Kesharwani, Vishal Kumar Sarsani, Yi Li, Joshy George, Krishna M. Karuturi:
Genome Informatics. 178-194 - Josep F. Abril, Sergi Castellano:
Genome Annotation. 195-209 - Emmanuelle Lerat:
Repeat in Genomes: How and Why You Should Consider Them in Genome Analyses? 210-220 - Prasoon Kumar Thakur, Hukam C. Rawal, Mina Obuca, Sandeep Kaushik:
Bioinformatics Approaches for Studying Alternative Splicing. 221-234 - William S. Bush:
Genome-Wide Association Studies. 235-241 - Kelly L. Williams:
Gene Mapping. 242-250 - Dean Southwood, Shoba Ranganathan:
Genome Databases and Browsers. 251-256 - Takeshi Kawashima:
Comparative and Evolutionary Genomics. 257-267 - Tetsushi Yada:
Genome Alignment. 268-283 - Hiroyuki Toh:
Phylogenetic Footprinting. 284-287 - Wayne K. Dawson, Michal Lazniewski, Dariusz Plewczynski:
Chromatin: A Semi-Structured Polymer. 288-307 - Vladimir B. Teif, Christopher T. Clarkson:
Nucleosome Positioning. 308-317 - Wing-Kin Sung:
Learning Chromatin Interaction Using Hi-C Datasets. 318-323 - Liang Chen, Garry Wong:
Transcriptome Informatics. 324-340 - Askhat Molkenov, Altyn Zhelambayeva, Akbar Yermekov, Saule Mussurova, Aliya Sarkytbayeva, Yerbol Kalykhbergenov, Zhaxybay Zhumadilov, Ulykbek Kairov:
Transcriptomic Databases. 341-351 - Christian Rockmann, Christoph Endrullat, Marcus Frohme, Heike Pospisil:
Next Generation Sequence Analysis. 352-363 - Fatemeh Vafaee, Hamed Dashti, Hamid Alinejad-Rokny:
Transcriptomic Data Normalization. 364-371 - Marc Delord:
Differential Expression From Microarray and RNA-seq Experiments. 372-387 - Xiaoxin Ye, Joshua W. K. Ho:
Expression Clustering. 388-395 - Saravanan Dayalan, Jianguo Xia, Rachel A. Spicer, Reza M. Salek, Ute Roessner:
Metabolome Analysis. 396-409 - Russell Pickford:
Mass Spectrometry-Based Metabolomic Analysis. 410-425 - Joram M. Posma:
Metabolic Profiling. 426-437 - Jean-Marc Schwartz, Zita Soons:
Metabolic Models. 438-444 - M. Michael Gromiha, Raju Nagarajan, Samuel Selvaraj:
Protein Structural Bioinformatics: An Overview. 445-459 - David R. Armstrong, John M. Berrisford, Matthew J. Conroy, Alice R. Clark, Deepti Gupta, Abhik Mukhopadhyay:
Protein Structure Databases. 460-471 - Natalie L. Dawson, Sayoni Das, Jonathan G. Lees, Christine A. Orengo:
Protein Structure Classification. 472-487 - Jonas Reeb, Burkhard Rost:
Secondary Structure Prediction. 488-496 - Sanne Abeln, K. Anton Feenstra, Jaap Heringa:
Protein Three-Dimensional Structure Prediction. 497-511 - Tsuyoshi Shirai:
Protein Structure Analysis and Validation. 512-519 - Sandeep Kaushik, Soumya Lipsa Rath:
Protein Structure Visualization. 520-538 - Luciano A. Abriata:
Computational Tools for Structural Analysis of Proteins. 539-549 - Liangzhen Zheng, Amr Alhossary, Chee-Keong Kwoh, Yuguang Mu:
Molecular Dynamics and Simulation. 550-566 - Airy Sanjeev, Mattaparthi Venkata Satish Kumar, Sandeep Kaushik:
Nucleic-Acid Structure Database. 567-574 - Junichi Iwakiri, Kiyoshi Asai:
RNA Structure Prediction. 575-584 - Varun Khanna, Shoba Ranganathan, Nikolai Petrovsky:
Rational Structure-Based Drug Design. 585-600 - Jaroslaw Polanski:
Chemoinformatics: From Chemical Art to Chemistry in Silico. 601-618 - Daniela Schuster:
Fingerprints and Pharmacophores. 619-627 - Sunghwan Kim:
Public Chemical Databases. 628-639 - Oliver Koch, Nils M. Kriege, Lina Humbeck:
Chemical Similarity and Substructure Searches. 640-649 - Oliver Koch, Christiane Ehrt, Tobias Brinkjost:
Binding Site Comparison - Software and Applications. 650-660 - Swathik Clarancia Peter, Jaspreet Kaur Dhanjal, Vidhi Malik, Navaneethan Radhakrishnan, Mannu Jayakanthan, Durai Sundar:
Quantitative Structure-Activity Relationship (QSAR): Modeling Approaches to Biological Applications. 661-676 - Balakumar Chandrasekaran, Nikhil Agrawal, Sandeep Kaushik:
Pharmacophore Development. 677-687 - Muhammad Yusuf, Ari Hardianto, Muchtaridi Muchtaridi, Rina F. Nuwarda, Toto Subroto:
Introduction of Docking-Based Virtual Screening Workflow Using Desktop Personal Computer. 688-699 - Michael A. Charleston:
Molecular Phylogenetics. 700-711 - David A. Liberles, Barbara R. Holland:
Evolutionary Models. 712-718 - Cara Van Der Wal, Simon Y. W. Ho:
Molecular Clock. 719-726 - Richard J. Edwards:
Phylogenetic Tree Rooting. 727-735 - Mahendra Mariadassou, Avner Bar-Hen, Hirohisa Kishino:
Tree Evaluation and Robustness Testing. 736-745 - Miguel Arenas:
Applications of the Coalescent for the Evolutionary Analysis of Genetic Data. 746-758 - Conrad J. Burden:
Population Genetics. 759-788 - Sucheendra K. Palaniappan, Ayako Yachie-Kinoshita, Samik Ghosh:
Computational Systems Biology. 789-795 - Sarita Poonia, Smriti Chawla, Sandeep Kaushik, Debarka Sengupta:
Pathway Informatics. 796-804 - Paolo Tieri, Lorenzo Farina, Manuela Petti, Laura Astolfi, Paola Paci, Filippo Castiglione:
Network Inference and Reconstruction in Bioinformatics. 805-813 - Laurentino Quiroga Moreno:
Graphlets and Motifs in Biological Networks. 814-820 - Edson Luiz Folador, Sandeep Tiwari, Camila E. Da Paz Barbosa, Syed B. Jamal, Marco Da Costa Schulze, Debmalya Barh, Vasco Ariston de Carvalho Azevedo:
Protein-Protein Interactions: An Overview. 821-833 - Anna Laddach, Sun Sook Chung, Franca Fraternali:
Prediction of Protein-Protein Interactions: Looking Through the Kaleidoscope. 834-848 - Ashwini Patil:
Protein-Protein Interaction Databases. 849-855 - Zhongming Zhao, Junfeng Xia:
Computational Approaches for Modeling Signal Transduction Networks. 856-863 - Ayako Yachie-Kinoshita, Kazunari Kaizu:
Cell Modeling and Simulation. 864-873 - Filippo Castiglione, Emiliano Mancini, Marco Pedicini, Abdul Salam Jarrah:
Quantitative Modelling Approaches. 874-883 - Martin Golebiewski:
Data Formats for Systems Biology and Quantitative Modeling. 884-893 - Josch Pauling:
Computational Lipidomics. 894-899 - Socrates Dokos:
Multi-Scale Modelling in Biology. 900-905 - Marta Gomez-Perosanz, Giulia Russo, Jose Luis Sanchez-Trincado Lopez, Marzio Pennisi, Pedro A. Reche, Adrian J. Shepherd, Francesco Pappalardo:
Computational Immunogenetics. 906-930 - Christine L. P. Eng, Tin Wee Tan, Joo Chuan Tong:
Immunoinformatics Databases. 931-939 - Katherine J. L. Jackson:
Study of Human Antibody Responses From Analysis of Immunoglobulin Gene Sequences. 940-951 - Roman Kogay, Christian Schönbach:
Epitope Predictions. 952-971 - Pazit Polak, Ramit Mehr, Gur Yaari:
Immunoglobulin Clonotype and Ontogeny Inference. 972-983 - Shoya Iwanami, Shingo Iwami:
Quantitative Immunology by Data Analysis Using Mathematical Models. 984-992 - Sorayya Malek, Mogeeb A. A. Mosleh, Sarinder Kaur Dhillon, Pozi Milow:
Bioimage Informatics. 993-1010 - Arpah Abu, Sarinder Kaur Dhillon:
Bioimage Databases. 1011-1027 - Saowaluck Kaewkamnerd, Apichart Intarapanich, Sissades Tongsima:
Segmentation Techniques for Bioimages. 1028-1045 - Sandeep Kaushik, Chakrawarti Prasun, Deepak Sharma:
Translational and Disease Bioinformatics. 1046-1057 - Onkar Singh, Nai-Wen Chang, Hong-Jie Dai, Jitendra Jonnagaddala:
Translational Bioinformatics Databases. 1058-1062 - Hong Yung Yip, Nur Aishah Taib, Haris A. Khan, Sarinder Kaur Dhillon:
Electronic Health Record Integration. 1063-1076 - Madhu Goyal:
Genome Databases and Browsers for Cancer. 1077-1082 - Sandeep Kaushik, Priyanka Baloni, Charu K. Midha:
Text Mining Resources for Bioinformatics. 1083-1092 - Meena K. Sakharkar, Karthic Rajamanickam, Chidambaram S. Babu, Jitender Madan, Ramesh Chandra, Jian Yang:
Preclinical: Drug Target Identification and Validation in Human. 1093-1098 - Hagit Shatkay:
Biomedical Text Mining. 1099-1109 - Lina A. M. Zalani, Kho S. Jye, Shaarmini Balakrishnan, Sarinder Kaur Dhillon:
Biodiversity Databases and Tools. 1110-1123 - Mohammed N. M. Ali, Amy Y. Then Hui, Sarinder Kaur Dhillon:
Challenges in Creating Online Biodiversity Repositories With Taxonomic Classification. 1124-1130 - Kazuhiro Takemoto, Midori Iida:
Ecological Networks. 1131-1141 - Bertil Schmidt, Andreas Hildebrandt:
Dedicated Bioinformatics Analysis Hardware. 1142-1150 - Jeremy Leipzig:
Computational Pipelines and Workflows in Bioinformatics. 1151-1162
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