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BMC Bioinformatics, Volume 15
Volume 15, 2014
- Christine B. Trame, Yuanyuan Chang, Herbert L. Axelrod, Ruth Y. Eberhardt
, Penelope Coggill, Marco Punta
, Neil D. Rawlings
:
New mini- zincin structures provide a minimal scaffold for members of this metallopeptidase superfamily. 1 - Wentian Li
, Jan Freudenberg, Pedro Miramontes:
Diminishing Return for Increased Mappability with Longer Sequencing Reads: Implications of the k-mer Distributions in the Human Genome. 2 - Tao Yang, Hong-Wen Deng
, Tianhua Niu:
Critical assessment of coalescent simulators in modeling recombination hotspots in genomic sequences. 3 - Xiang Liu, Tao Lu, Yongchao Dou, Bin Yu, Chi Zhang
:
Identification of RNA silencing components in soybean and sorghum. 4 - Mingming Liu, Layne T. Watson, Liqing Zhang:
Quantitative prediction of the effect of genetic variation using hidden Markov models. 5 - Predrag Kukic, Claudio Mirabello
, Giuseppe Tradigo, Ian Walsh
, Pierangelo Veltri
, Gianluca Pollastri
:
Toward an accurate prediction of inter-residue distances in proteins using 2D recursive neural networks. 6 - Travis J. Wheeler
, Jody Clements
, Robert D. Finn
:
Skylign: a tool for creating informative, interactive logos representing sequence alignments and profile hidden Markov models. 7 - Miron B. Kursa
:
Robustness of Random Forest-based gene selection methods. 8 - Jaza Gul-Mohammed, Ignacio Arganda-Carreras
, Philippe Andrey, Vincent Galy
, Thomas Boudier
:
A generic classification-based method for segmentation of nuclei in 3D images of early embryos. 9 - Daniel Taliun, Johann Gamper
, Cristian Pattaro
:
Efficient haplotype block recognition of very long and dense genetic sequences. 10 - Jianlong Qi, Hassan Asl, Johan Björkegren
, Tom Michoel
:
kruX: matrix-based non-parametric eQTL discovery. 11 - Kota Kasahara
, Kengo Kinoshita:
GIANT: pattern analysis of molecular interactions in 3D structures of protein-small ligand complexes. 12 - Hyunjung Kang, Ikjung Choi, Sooyoung Cho, Daeun Ryu, Sanghyuk Lee, Wan Kyu Kim
:
gsGator: an integrated web platform for cross-species gene set analysis. 13 - Doulaye Dembélé
, Philippe Kastner:
Fold change rank ordering statistics: a new method for detecting differentially expressed genes. 14 - Rimpi Khurana
, Vinod Kumar Verma, Abdul Rawoof
, Shrish Tiwari, Rekha A. Nair, Ganesh Mahidhara, Mohammed M. Idris, Alan R. Clarke
, Lekha Dinesh Kumar:
OncomiRdbB: a comprehensive database of microRNAs and their targets in breast cancer. 15 - Stefano Teso
, Andrea Passerini
:
Joint probabilistic-logical refinement of multiple protein feature predictors. 16 - Rong Xu
, QuanQiu Wang:
Large-scale combining signals from both biomedical literature and the FDA Adverse Event Reporting System (FAERS) to improve post-marketing drug safety signal detection. 17 - Herbert Baier
, Jörg Schultz:
ISAAC - InterSpecies Analysing Application using Containers. 18 - Ate van der Burgt, Edouard Severing, Jérôme Collemare, Pierre J. G. M. de Wit:
Automated alignment-based curation of gene models in filamentous fungi. 19 - Jaydeep De, Huiqi Li, Li Cheng
:
Tracing retinal vessel trees by transductive inference. 20 - Barrie S. Bradley, Joseph C. Loftus, Clinton J. Mielke, Valentin Dinu
:
Differential expression of microRNAs as predictors of glioblastoma phenotypes. 21 - Pawel Gniewek
, Andrzej Kolinski
, Andrzej Kloczkowski, Dominik Gront
:
BioShell-Threading: versatile Monte Carlo package for protein 3D threading. 22 - Eran Elhaik, Matteo Pellegrini
, Tatiana V. Tatarinova
:
Gene expression and nucleotide composition are associated with genic methylation level in Oryza sativa. 23 - Sergii Zakharov, Garrett H. K. Teoh, Agus Salim
, Anbupalam Thalamuthu
:
A method to incorporate prior information into score test for genetic association studies. 24 - Marianna D'Addario, Dominik Kopczynski
, Jörg Ingo Baumbach, Sven Rahmann
:
A modular computational framework for automated peak extraction from ion mobility spectra. 25 - Anirban Mukhopadhyay
, Sumanta Ray
, Ujjwal Maulik
:
Incorporating the type and direction information in predicting novel regulatory interactions between HIV-1 and human proteins using a biclustering approach. 26 - Kyung In Kim, Richard Simon:
Using single cell sequencing data to model the evolutionary history of a tumor. 27 - Charles Cole, Konstantinos Krampis, Konstantinos Karagiannis, Jonas S. Almeida, William J. Faison, Mona Motwani
, Quan Wan
, Anton Golikov, Yang Pan
, Vahan Simonyan, Raja Mazumder
:
Non-synonymous variations in cancer and their effects on the human proteome: workflow for NGS data biocuration and proteome-wide analysis of TCGA data. 28 - Peter K. Busk:
A tool for design of primers for microRNA-specific quantitative RT-qPCR. 29 - Jeffrey G. Reid, Andrew Carroll, Narayanan Veeraraghavan, Mahmoud Dahdouli, Andreas Sundquist, Adam C. English, Matthew N. Bainbridge, Simon White
, William J. Salerno, Christian Buhay, Fuli Yu, Donna M. Muzny, Richard Daly, Geoff Duyk, Richard A. Gibbs, Eric Boerwinkle:
Launching genomics into the cloud: deployment of Mercury, a next generation sequence analysis pipeline. 30 - Miguel Reboiro-Jato
, Joel Arrais
, José Luís Oliveira
, Florentino Fdez-Riverola
:
geneCommittee: a web-based tool for extensively testing the discriminatory power of biologically relevant gene sets in microarray data classification. 31 - Hamid Mohamadlou, Joseph C. Shope, Nicholas S. Flann:
Maximizing Kolmogorov Complexity for accurate and robust bright field cell segmentation. 32 - Ram Shrestha, Baruch Lubinsky, Vijay B. Bansode, Mónica B. J. Moinz, Grace P. McCormack
, Simon A. A. Travers:
QTrim: a novel tool for the quality trimming of sequence reads generated using the Roche/454 sequencing platform. 33 - Marius Nicolae, Sanguthevar Rajasekaran:
Efficient Sequential and Parallel Algorithms for Planted Motif Search. 34 - Wei Jiao, Shankar Vembu, Amit G. Deshwar, Lincoln Stein, Quaid Morris
:
Inferring clonal evolution of tumors from single nucleotide somatic mutations. 35 - Adam Skarshewski, Mitchell Stanton-Cook, Thomas Huber
, Sumaya Al Mansoori, Ross Smith, Scott A. Beatson
, Joseph A. Rothnagel:
uPEPperoni: An online tool for upstream open reading frame location and analysis of transcript conservation. 36 - Yiyi Liu, Quanquan Gu, Jack P. Hou, Jiawei Han, Jian Ma
:
A network-assisted co-clustering algorithm to discover cancer subtypes based on gene expression. 37 - Martin Nettling, Nils Thieme, Andreas Both, Ivo Grosse:
DRUMS: Disk Repository with Update Management and Select option for high throughput sequencing data. 38 - Evelien Vaes, Mona Khan, Peter Mombaerts:
Statistical analysis of differential gene expression relative to a fold change threshold on NanoString data of mouse odorant receptor genes. 39 - Swetansu Pattnaik
, Saurabh Gupta
, Arjun A. Rao
, Binay Panda:
SInC: an accurate and fast error-model based simulator for SNPs, Indels and CNVs coupled with a read generator for short-read sequence data. 40 - Susan M. Huse, David B. Mark Welch, Andy Voorhis, Anna Shipunova, Hilary G. Morrison
, A. Murat Eren
, Mitchell L. Sogin:
VAMPS: a website for visualization and analysis of microbial population structures. 41 - Jongik Kim, Chen Li, Xiaohui Xie:
Improving read mapping using additional prefix grams. 42 - Chris J. Stubben
, Jean F. Challacombe:
Mining locus tags in PubMed Central to improve microbial gene annotation. 43 - Youri Lammers, Tamara Peelen, Rutger A. Vos
, Barbara Gravendeel
:
The HTS barcode checker pipeline, a tool for automated detection of illegally traded species from high-throughput sequencing data. 44 - Heather C. Wick, Harold J. Drabkin, Huy Ngu, Michael Sackman, Craig Fournier, Jessica Haggett, Judith A. Blake
, Diana W. Bianchi, Donna K. Slonim
:
DFLAT: functional annotation for human development. 45 - Suhas Tikole, Victor Jaravine, Vladimir Rogov, Volker Dötsch
, Peter Güntert
:
Peak picking NMR spectral data using non-negative matrix factorization. 46 - Edward Michael Gertz
, Tero Hiekkalinna
, Sébastien Le Digabel
, Charles Audet, Joseph D. Terwilliger, Alejandro A. Schäffer:
PSEUDOMARKER 2.0: efficient computation of likelihoods using NOMAD. 47 - Peng Yang, Min Wu
, Jing Guo, Chee Keong Kwoh, Teresa M. Przytycka
, Jie Zheng:
LDsplit: screening for cis-regulatory motifs stimulating meiotic recombination hotspots by analysis of DNA sequence polymorphisms. 48 - Kun-Huang Chen, Kung-Jeng Wang, Min-Lung Tsai, Kung-Min Wang, Angelia Melani-Adrian, Wei-Chung Cheng
, Tzu-Sen Yang, Nai-Chia Teng, Kuo-Pin Tan, Ku-Shang Chang:
Gene selection for cancer identification: a decision tree model empowered by particle swarm optimization algorithm. 49 - Xin Zhang, Renqian Du, Shilin Li, Feng Zhang
, Li Jin
, Hongyan Wang:
Evaluation of copy number variation detection for a SNP array platform. 50 - Hiroyuki Yamamoto, Tamaki Fujimori, Hajime Sato, Gen Ishikawa, Kenjiro Kami, Yoshiaki Ohashi:
Statistical hypothesis testing of factor loading in principal component analysis and its application to metabolite set enrichment analysis. 51 - Louis-Philippe Lemieux Perreault, Marc-André Legault, Amina Barhdadi, Sylvie Provost, Valérie Normand, Jean-Claude Tardif, Marie-Pierre Dubé
:
Comparison of genotype clustering tools with rare variants. 52 - Sagi Abelson
:
Eureka-DMA: an easy-to-operate graphical user interface for fast comprehensive investigation and analysis of DNA microarray data. 53 - Pawel Gasior, Malgorzata Kotulska:
FISH Amyloid - a new method for finding amyloidogenic segments in proteins based on site specific co-occurence of aminoacids. 54 - Vladimir Arinkin, Ilya Digel
, Dariusz Porst, Aysegül Artmann, Gerhard M. Artmann:
Phenotyping date palm varieties via leaflet cross-sectional imaging and artificial neural network application. 55 - Hongjian Li, Kwong-Sak Leung, Takanori Nakane
, Man Hon Wong:
iview: an interactive WebGL visualizer for protein-ligand complex. 56 - Qian Liu, Steven C. H. Hoi
, Chee Keong Kwoh, Limsoon Wong
, Jinyan Li:
Integrating water exclusion theory into βcontacts to predict binding free energy changes and binding hot spots. 57 - Murat Sariyar, Isabell Hoffmann, Harald Binder
:
Combining techniques for screening and evaluating interaction terms on high-dimensional time-to-event data. 58 - Christopher S. Funk, William A. Baumgartner Jr., Benjamin Garcia
, Christophe Roeder, Michael Bada, K. Bretonnel Cohen, Lawrence E. Hunter
, Karin Verspoor
:
Large-scale biomedical concept recognition: an evaluation of current automatic annotators and their parameters. 59 - Jiabin Huang
, Björn Voß
:
Analysing RNA-kinetics based on folding space abstraction. 60 - Bart Hazes:
CDSbank: taxonomy-aware extraction, selection, renaming and formatting of protein-coding DNA or amino acid sequences. 61 - Jianwei Gou, Yang Zhao, Yongyue Wei, Chen Wu, Ruyang Zhang, Yongyong Qiu, Ping Zeng, Wen Tan, Dianke Yu, Tangchun Wu, Zhibin Hu, Dongxin Lin
, Hongbing Shen, Feng Chen:
Stability SCAD: a powerful approach to detect interactions in large-scale genomic study. 62 - Micah J. Manary, Suriya S. Singhakul, Erika L. Flannery, Selina E. R. Bopp, Victoria C. Corey, Andrew Bright, Case W. McNamara, John R. Walker, Elizabeth A. Winzeler
:
Identification of pathogen genomic variants through an integrated pipeline. 63 - Ning Kang, Bharat Singh, Quoc-Chinh Bui, Zubair Afzal
, Erik M. van Mulligen
, Jan A. Kors:
Knowledge-based extraction of adverse drug events from biomedical text. 64 - Michal Wozniak, Limsoon Wong
, Jerzy Tiuryn:
eCAMBer: efficient support for large-scale comparative analysis of multiple bacterial strains. 65 - Nicholas J. Hudson, Laercio R. Porto-Neto
, James Kijas, Sean McWilliam, Ryan J. Taft, Antonio Reverter:
Information compression exploits patterns of genome composition to discriminate populations and highlight regions of evolutionary interest. 66 - Irene Pala:
Reviewer acknowledgement 2013. 67 - Helge G. Roider, Nadia Pavlova, Ivaylo Kirov, Stoyan Slavov, Todor Slavov, Zlatyo Uzunov
, Bertram Weiss:
Drug2Gene: an exhaustive resource to explore effectively the drug-target relation network. 68 - Zhuohui Gan, Jianwu Wang, Nathan Salomonis, Jennifer C. Stowe, Gabriel G. Haddad, Andrew D. McCulloch, Ilkay Altintas, Alexander C. Zambon:
MAAMD: a workflow to standardize meta-analyses and comparison of affymetrix microarray data. 69 - Hongmin Cai
, Peiying Ruan, Michael Kwok-Po Ng, Tatsuya Akutsu
:
Feature weight estimation for gene selection: a local hyperlinear learning approach. 70 - Mariko Nakagome, Elena Solovieva
, Akira Takahashi, Hiroshi Yasue, Hirohiko Hirochika, Akio Miyao
:
Transposon Insertion Finder (TIF): a novel program for detection of de novo transpositions of transposable elements. 71 - Carlos Mata-Munguía, Martha Escoto-Delgadillo
, Blanca Torres-Mendoza, Mario Flores-Soto, Mildred Vázquez-Torres, Francisco Gálvez-Gastelum, Arturo Viniegra-Osorio, Marcelo Castillero-Manzano, Eduardo Vázquez-Valls
:
Natural polymorphisms and unusual mutations in HIV-1 protease with potential antiretroviral resistance: a bioinformatic analysis. 72 - Mehmet Deveci, Ümit V. Çatalyürek
, Amanda E. Toland
:
mrSNP: Software to detect SNP effects on microRNA binding. 73 - Shengping Yang, Xiangqin Cui
, Zhide Fang:
BCRgt: a Bayesian cluster regression-based genotyping algorithm for the samples with copy number alterations. 74 - Debanu Das, Alexey G. Murzin, Neil D. Rawlings
, Robert D. Finn
, Penelope Coggill, Alex Bateman
, Adam Godzik
, L. Aravind
:
Structure and computational analysis of a novel protein with metallopeptidase-like and circularly permuted winged-helix-turn-helix domains reveals a possible role in modified polysaccharide biosynthesis. 75 - Simon Roux, Jeremy Tournayre, Antoine Mahul, Didier Debroas, François Enault:
Metavir 2: new tools for viral metagenome comparison and assembled virome analysis. 76 - Mark C. Evans, Pham Phung, Agnes C. Paquet, Anvi Parikh, Christos J. Petropoulos, Terri Wrin, Mojgan Haddad:
Predicting HIV-1 broadly neutralizing antibody epitope networks using neutralization titers and a novel computational method. 77 - Shaylan K. Govind, Amin Zia
, Pablo H. Hennings-Yeomans, John D. Watson, Michael Fraser, Catalina V. Anghel
, Alexander Wyatt, Theodorus van der Kwast
, Colin C. Collins, John D. McPherson
, Robert G. Bristow
, Paul C. Boutros
:
ShatterProof: operational detection and quantification of chromothripsis. 78 - Neil R. Clark
, Kevin S. Hu
, Axel S. Feldmann, Yan Kou, Edward Y. Chen, Qiaonan Duan, Avi Ma'ayan
:
The characteristic direction: a geometrical approach to identify differentially expressed genes. 79 - Dawit Nigatu
, Attiya Mahmood, Werner Henkel
:
The Empirical Codon Mutation Matrix as a Communication Channel. 80 - Kristoffer Vitting-Seerup
, Bo T. Porse
, Albin Sandelin
, Johannes Waage
:
spliceR: an R package for classification of alternative splicing and prediction of coding potential from RNA-seq data. 81 - Calem J. Bendell, Shalon Liu, Tristan Aumentado-Armstrong
, Bogdan Istrate, Paul T. Cernek, Samuel Khan, Sergiu Picioreanu, Michael Zhao
, Robert A. Murgita:
Transient protein-protein interface prediction: datasets, features, algorithms, and the RAD-T predictor. 82 - Tung T. Nguyen, John S. A. Mattick
, Qian Yang, Mehmet A. Orman, Marianthi G. Ierapetritou, Francois Berthiaume, Ioannis P. Androulakis:
Bioinformatics analysis of transcriptional regulation of circadian genes in rat liver. 83 - Chandrasekhar Ramakrishnan, Andrej Bieri, Nora Sauter, Sophie Roizard, Philippe Ringler, Shirley A. Müller, Kenneth N. Goldie, Kaloyan Enimanev, Henning Stahlberg
, Bernd Rinn, Thomas Braun:
openBEB: open biological experiment browser for correlative measurements. 84 - László Kaján, Thomas A. Hopf, Matú Kala
, Debora S. Marks, Burkhard Rost
:
FreeContact: fast and free software for protein contact prediction from residue co-evolution. 85 - Gregory A. Ryslik, Yuwei Cheng, Kei-Hoi Cheung, Yorgo Modis
, Hongyu Zhao:
A graph theoretic approach to utilizing protein structure to identify non-random somatic mutations. 86 - Brett Hanson, Charles Westin, Mario Rosa, Alexander Grier, Mikhail Osipovitch, Madolyn L. MacDonald
, Greg Dodge
, Paule M. Boli, Cyprian W. Corwin, Haeja Kessler, Talia McKay, Herbert J. Bernstein
, Paul A. Craig
:
Estimation of protein function using template-based alignment of enzyme active sites. 87 - Koen Van der Borght, Geert Verbeke
, Herman van Vlijmen:
Multi-model inference using mixed effects from a linear regression based genetic algorithm. 88 - Fabian Amman
, Michael T. Wolfinger
, Ronny Lorenz
, Ivo L. Hofacker
, Peter F. Stadler
, Sven Findeiß
:
TSSAR: TSS annotation regime for dRNA-seq data. 89 - Koldo Garcia-Etxebarria
, Marc Garcia-Garcerà, Francesc Calafell
:
Consistency of metagenomic assignment programs in simulated and real data. 90 - Andrea Rau, Guillemette Marot
, Florence Jaffrézic:
Differential meta-analysis of RNA-seq data from multiple studies. 91 - Nysia I. George, Ching-Wei Chang:
DAFS: a data-adaptive flag method for RNA-sequencing data to differentiate genes with low and high expression. 92 - Bastiaan A. van den Berg, Marcel J. T. Reinders, Johannes A. Roubos, Dick de Ridder:
SPiCE: a web-based tool for sequence-based protein classification and exploration. 93 - Helena Andrade, Iván Area, Juan J. Nieto
, Angela Torres
:
The number of reduced alignments between two DNA sequences. 94 - Hsin-Wei Wang, Chia-Han Chu, Wen-Ching Wang
, Tun-Wen Pai:
A local average distance descriptor for flexible protein structure comparison. 95 - Mehmet Gültas
, Güncel Düzgün, Sebastian Herzog, Sven Joachim Jäger, Cornelia Meckbach, Edgar Wingender
, Stephan Waack:
Quantum Coupled Mutation Finder: Predicting functionally or structurally important sites in proteins using quantum Jensen-Shannon divergence and CUDA programming. 96 - Suyan Tian
, Howard H. Chang, Chi Wang, Jing Jiang, Xiaomei Wang, Junqi Niu:
Multi-TGDR, a multi-class regularization method, identifies the metabolic profiles of hepatocellular carcinoma and cirrhosis infected with hepatitis B or hepatitis C virus. 97 - Markus K. Muellner, Gerhard Dürnberger, Florian Ganglberger
, Claudia Kerzendorfer, Iris Z. Uras
, Andreas Schoenegger, Klaudia Bagienski, Jacques Colinge
, Sebastian M. B. Nijman
:
TOPS: a versatile software tool for statistical analysis and visualization of combinatorial gene-gene and gene-drug interaction screens. 98 - Birte Kehr, Kathrin Trappe, Manuel Holtgrewe, Knut Reinert
:
Genome alignment with graph data structures: a comparison. 99 - Peter Kerpedjiev
, Jes Frellsen
, Stinus Lindgreen, Anders Krogh
:
Adaptable probabilistic mapping of short reads using position specific scoring matrices. 100 - Diego H. Milone
, Georgina Stegmayer
, Mariana G. Lopez
, Laura Kamenetzky, Fernando Carrari:
Improving clustering with metabolic pathway data. 101 - Xuan Guo, Meng Yu, Ning Yu, Yi Pan
:
Cloud computing for detecting high-order genome-wide epistatic interaction via dynamic clustering. 102 - Claudio Saccà, Stefano Teso
, Michelangelo Diligenti, Andrea Passerini
:
Improved multi-level protein¿protein interaction prediction with semantic-based regularization. 103 - Brandi L. Cantarel, Daniel Weaver, Nathan McNeill, Jianhua Zhang, Aaron J. Mackey, Justin T. Reese:
BAYSIC: a Bayesian method for combining sets of genome variants with improved specificity and sensitivity. 104 - Rong Xu
, Li Li, QuanQiu Wang:
dRiskKB: a large-scale disease-disease risk relationship knowledge base constructed from biomedical text. 105 - Gábor Márk Somfai, Erika Tátrai, Lenke Laurik, Boglárka Varga, Veronika Ölvedy, Hong Jiang, Jianhua Wang, William E. Smiddy, Anikó Somogyi, Delia Cabrera DeBuc
:
Automated classifiers for early detection and diagnosis of retinopathy in diabetic eyes. 106 - Jean-Pierre Flandrois
, Gérard Lina
, Oana Dumitrescu
:
MUBII-TB-DB: a database of mutations associated with antibiotic resistance in Mycobacterium tuberculosis. 107 - Yihan Li, Debashis Ghosh:
A Two-Step Hierarchical Hypothesis Set Testing Framework, with Applications to Gene Expression Data on Ordered Categories. 108 - Heng Wang, Dan Nettleton
, Kai Ying:
Copy number variation detection using next generation sequencing read counts. 109 - Yun Zhang, Charles A. Phillips, Gary L. Rogers
, Erich J. Baker, Elissa J. Chesler, Michael A. Langston:
On finding bicliques in bipartite graphs: a novel algorithm and its application to the integration of diverse biological data types. 110 - Carlos Bermejo-Das-Neves, Hoan-Ngoc Nguyen, Olivier Poch, Julie Dawn Thompson:
A comprehensive study of small non-frameshift insertions/deletions in proteins and prediction of their phenotypic effects by a machine learning method (KD4i). 111 - Anna Sheydina, Ruth Y. Eberhardt
, Daniel J. Rigden
, Yuanyuan Chang, Zhanwen Li, Christian M. Zmasek, Herbert L. Axelrod, Adam Godzik
:
Structural genomics analysis of uncharacterized protein families overrepresented in human gut bacteria identifies a novel glycoside hydrolase. 112 - Juuso A. Parkkinen, Samuel Kaski:
Probabilistic drug connectivity mapping. 113 - Christina A. Castellani
, Melkaye G. Melka, Andrea E. Wishart
, M. Elizabeth Locke, Zain Awamleh
, Richard L. O'Reilly, Shiva M. Singh:
Biological relevance of CNV calling methods using familial relatedness including monozygotic twins. 114 - Ståle Nygård
, Trond Reitan
, Trevor Clancy
, Vegard Nygaard, Johannes Bjørnstad, Biljana Skrbic, Theis Tønnessen, Geir Christensen, Eivind Hovig
:
Identifying pathogenic processes by integrating microarray data with prior knowledge. 115 - Mark A. van de Wiel
, Maarten Neerincx, Tineke E. Buffart, Daoud Sie
, Henk M. W. Verheul
:
ShrinkBayes: a versatile R-package for analysis of count-based sequencing data in complex study designs. 116